RNA–Protein interactions for RNA: ENST00000416065.1

RABEPK-205, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 3

Gene RABEPK, Length 733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-205ENST00000416065 NISCHQ9Y2I1 1504 aa31.8■■■□□ 2.68
RABEPK-205ENST00000416065 ABCC9O60706 1549 aa29.41■■■□□ 2.3
RABEPK-205ENST00000416065 CCDC180Q9P1Z9 1646 aa28.66■■■□□ 2.18
RABEPK-205ENST00000416065 DNAJC5BQ9UF47 199 aa28.37■■■□□ 2.13
RABEPK-205ENST00000416065 RB1CC1Q8TDY2 1594 aa27.67■■■□□ 2.02
RABEPK-205ENST00000416065 NACADO15069 1562 aa27.26■■□□□ 1.95
RABEPK-205ENST00000416065 PABPN1Q86U42 306 aaKnown RBP eCLIP27.2■■□□□ 1.94
RABEPK-205ENST00000416065 UNC13AQ9UPW8 1703 aa26.91■■□□□ 1.9
RABEPK-205ENST00000416065 DNAJC5Q9H3Z4 198 aa26.88■■□□□ 1.89
RABEPK-205ENST00000416065 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.89
RABEPK-205ENST00000416065 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
RABEPK-205ENST00000416065 BICRAQ9NZM4 1560 aa26.8■■□□□ 1.88
RABEPK-205ENST00000416065 CECR2Q9BXF3 1484 aa26.65■■□□□ 1.86
RABEPK-205ENST00000416065 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
RABEPK-205ENST00000416065 SHROOM4Q9ULL8 1493 aa26.53■■□□□ 1.84
RABEPK-205ENST00000416065 DCAF1Q9Y4B6 1507 aa26.41■■□□□ 1.82
RABEPK-205ENST00000416065 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
RABEPK-205ENST00000416065 EIF4G1Q04637 1599 aaKnown RBP26.26■■□□□ 1.79
RABEPK-205ENST00000416065 SCRIBQ14160 1630 aa25.91■■□□□ 1.74
RABEPK-205ENST00000416065 CUX2O14529 1486 aa25.85■■□□□ 1.73
RABEPK-205ENST00000416065 ERCC6Q03468 1493 aa25.54■■□□□ 1.68
RABEPK-205ENST00000416065 TRIM41Q8WV44 630 aa25.26■■□□□ 1.63
RABEPK-205ENST00000416065 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
RABEPK-205ENST00000416065 NESP48681 1621 aa24.95■■□□□ 1.58
RABEPK-205ENST00000416065 THOC2Q8NI27 1593 aaKnown RBP24.94■■□□□ 1.58
RABEPK-205ENST00000416065 ATAD2BQ9ULI0 1458 aa24.9■■□□□ 1.58
RABEPK-205ENST00000416065 HMGXB3Q12766 1538 aa24.89■■□□□ 1.57
RABEPK-205ENST00000416065 SMARCA2P51531 1590 aa24.85■■□□□ 1.57
RABEPK-205ENST00000416065 SMARCA4P51532 1647 aa24.81■■□□□ 1.56
RABEPK-205ENST00000416065 LAMC3Q9Y6N6 1575 aa24.76■■□□□ 1.55
RABEPK-205ENST00000416065 BAZ1AQ9NRL2 1556 aaPredicted RBP24.75■■□□□ 1.55
RABEPK-205ENST00000416065 PDS5BQ9NTI5 1447 aa24.68■■□□□ 1.54
RABEPK-205ENST00000416065 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
RABEPK-205ENST00000416065 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.53
RABEPK-205ENST00000416065 KIF21AQ7Z4S6 1674 aa24.62■■□□□ 1.53
RABEPK-205ENST00000416065 OSCARQ8IYS5 282 aa24.5■■□□□ 1.51
RABEPK-205ENST00000416065 MRC2Q9UBG0 1479 aa24.47■■□□□ 1.51
RABEPK-205ENST00000416065 WDR62O43379 1518 aa24.42■■□□□ 1.5
RABEPK-205ENST00000416065 MROH2BQ7Z745 1585 aa24.41■■□□□ 1.5
RABEPK-205ENST00000416065 CADPSQ9ULU8 1353 aa24.34■■□□□ 1.49
RABEPK-205ENST00000416065 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
RABEPK-205ENST00000416065 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
RABEPK-205ENST00000416065 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
RABEPK-205ENST00000416065 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
RABEPK-205ENST00000416065 WIZO95785 1651 aa24.11■■□□□ 1.45
RABEPK-205ENST00000416065 AEBP2Q6ZN18 517 aaPredicted RBP24.07■■□□□ 1.44
RABEPK-205ENST00000416065 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
RABEPK-205ENST00000416065 FANCD2Q9BXW9 1451 aa24.05■■□□□ 1.44
RABEPK-205ENST00000416065 TRHP20396 242 aaPredicted RBP24.01■■□□□ 1.43
RABEPK-205ENST00000416065 CYB5RLQ6IPT4 315 aa23.94■■□□□ 1.42
RABEPK-205ENST00000416065 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
RABEPK-205ENST00000416065 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
RABEPK-205ENST00000416065 CFTRP13569 1480 aa23.9■■□□□ 1.42
RABEPK-205ENST00000416065 URB2Q14146 1524 aaKnown RBP23.86■■□□□ 1.41
RABEPK-205ENST00000416065 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
RABEPK-205ENST00000416065 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
RABEPK-205ENST00000416065 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
RABEPK-205ENST00000416065 ZNF608Q9ULD9 1512 aaPredicted RBP23.7■■□□□ 1.38
RABEPK-205ENST00000416065 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
RABEPK-205ENST00000416065 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
RABEPK-205ENST00000416065 CHD1O14646 1710 aa23.55■■□□□ 1.36
RABEPK-205ENST00000416065 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
RABEPK-205ENST00000416065 FBLN2P98095 1184 aa23.48■■□□□ 1.35
RABEPK-205ENST00000416065 TOPBP1Q92547 1522 aa23.47■■□□□ 1.35
RABEPK-205ENST00000416065 AQRO60306 1485 aaKnown RBP eCLIP23.39■■□□□ 1.34
RABEPK-205ENST00000416065 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
RABEPK-205ENST00000416065 TARBP1Q13395 1621 aaKnown RBP23.32■■□□□ 1.32
RABEPK-205ENST00000416065 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
RABEPK-205ENST00000416065 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
RABEPK-205ENST00000416065 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
RABEPK-205ENST00000416065 WDR97A6NE52 1622 aa23.17■■□□□ 1.3
RABEPK-205ENST00000416065 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
RABEPK-205ENST00000416065 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
RABEPK-205ENST00000416065 GAPVD1Q14C86 1478 aa23.14■■□□□ 1.29
RABEPK-205ENST00000416065 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
RABEPK-205ENST00000416065 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
RABEPK-205ENST00000416065 ILDR1Q86SU0 546 aaPredicted RBP23.08■■□□□ 1.29
RABEPK-205ENST00000416065 SOGA1O94964 1423 aa23.07■■□□□ 1.28
RABEPK-205ENST00000416065 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
RABEPK-205ENST00000416065 SYNJ2O15056 1496 aa23.04■■□□□ 1.28
RABEPK-205ENST00000416065 GRIN2BQ13224 1484 aa23■■□□□ 1.27
RABEPK-205ENST00000416065 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
RABEPK-205ENST00000416065 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
RABEPK-205ENST00000416065 CUX1P39880 1505 aa22.96■■□□□ 1.27
RABEPK-205ENST00000416065 KIF13AQ9H1H9 1805 aa22.84■■□□□ 1.25
RABEPK-205ENST00000416065 ABCA10Q8WWZ4 1543 aa22.82■■□□□ 1.24
RABEPK-205ENST00000416065 PBRM1Q86U86 1689 aa22.79■■□□□ 1.24
RABEPK-205ENST00000416065 ERCC6L2Q5T890 1561 aa22.77■■□□□ 1.24
RABEPK-205ENST00000416065 KDM4FA0A1W2PPD8 638 aa22.77■■□□□ 1.24
RABEPK-205ENST00000416065 ABCA5Q8WWZ7 1642 aa22.77■■□□□ 1.24
RABEPK-205ENST00000416065 CEP170Q5SW79 1584 aa22.73■■□□□ 1.23
RABEPK-205ENST00000416065 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
RABEPK-205ENST00000416065 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
RABEPK-205ENST00000416065 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
RABEPK-205ENST00000416065 FAM69CQ0P6D2 419 aa22.67■■□□□ 1.22
RABEPK-205ENST00000416065 TOP2BQ02880 1626 aa22.67■■□□□ 1.22
RABEPK-205ENST00000416065 ABCC10Q5T3U5 1492 aa22.66■■□□□ 1.22
RABEPK-205ENST00000416065 NUP160Q12769 1436 aa22.65■■□□□ 1.22
RABEPK-205ENST00000416065 SHROOM2Q13796 1616 aa22.64■■□□□ 1.21
RABEPK-205ENST00000416065 KDM6BO15054 1643 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms