RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 NISCHQ9Y2I1 1504 aa34.53■■■■□ 3.12
RAPGEF1-204ENST00000414781 ABCC9O60706 1549 aa32.23■■■□□ 2.75
RAPGEF1-204ENST00000414781 CCDC180Q9P1Z9 1646 aa31.39■■■□□ 2.62
RAPGEF1-204ENST00000414781 DNAJC5BQ9UF47 199 aa30.99■■■□□ 2.55
RAPGEF1-204ENST00000414781 RB1CC1Q8TDY2 1594 aa30.35■■■□□ 2.45
RAPGEF1-204ENST00000414781 NACADO15069 1562 aa29.94■■■□□ 2.38
RAPGEF1-204ENST00000414781 PABPN1Q86U42 306 aaKnown RBP eCLIP29.83■■■□□ 2.37
RAPGEF1-204ENST00000414781 DCAF8L2P0C7V8 631 aa29.46■■■□□ 2.31
RAPGEF1-204ENST00000414781 UNC13AQ9UPW8 1703 aa29.45■■■□□ 2.31
RAPGEF1-204ENST00000414781 BICRAQ9NZM4 1560 aa29.42■■■□□ 2.3
RAPGEF1-204ENST00000414781 MYO15BQ96JP2 1530 aa29.29■■■□□ 2.28
RAPGEF1-204ENST00000414781 DNAJC5Q9H3Z4 198 aa29.25■■■□□ 2.27
RAPGEF1-204ENST00000414781 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
RAPGEF1-204ENST00000414781 SHROOM4Q9ULL8 1493 aa29.14■■■□□ 2.26
RAPGEF1-204ENST00000414781 CC2D2AQ9P2K1 1620 aa29.06■■■□□ 2.24
RAPGEF1-204ENST00000414781 EIF4G1Q04637 1599 aaKnown RBP28.81■■■□□ 2.2
RAPGEF1-204ENST00000414781 DCAF1Q9Y4B6 1507 aa28.54■■■□□ 2.16
RAPGEF1-204ENST00000414781 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
RAPGEF1-204ENST00000414781 ZCCHC6Q5VYS8 1495 aaKnown RBP28.44■■■□□ 2.14
RAPGEF1-204ENST00000414781 CUX2O14529 1486 aa28.27■■■□□ 2.12
RAPGEF1-204ENST00000414781 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
RAPGEF1-204ENST00000414781 NCAPD3P42695 1498 aa27.66■■■□□ 2.02
RAPGEF1-204ENST00000414781 TRIM41Q8WV44 630 aa27.52■■■□□ 2
RAPGEF1-204ENST00000414781 ATAD2BQ9ULI0 1458 aa27.4■■□□□ 1.98
RAPGEF1-204ENST00000414781 NESP48681 1621 aa27.39■■□□□ 1.98
RAPGEF1-204ENST00000414781 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
RAPGEF1-204ENST00000414781 THOC2Q8NI27 1593 aaKnown RBP27.34■■□□□ 1.97
RAPGEF1-204ENST00000414781 SMARCA2P51531 1590 aa27.31■■□□□ 1.96
RAPGEF1-204ENST00000414781 LAMC3Q9Y6N6 1575 aa27.15■■□□□ 1.94
RAPGEF1-204ENST00000414781 SMARCA4P51532 1647 aa27.1■■□□□ 1.93
RAPGEF1-204ENST00000414781 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
RAPGEF1-204ENST00000414781 PDS5BQ9NTI5 1447 aa27.08■■□□□ 1.93
RAPGEF1-204ENST00000414781 KIF21AQ7Z4S6 1674 aa26.97■■□□□ 1.91
RAPGEF1-204ENST00000414781 PEG3Q9GZU2 1588 aa26.91■■□□□ 1.9
RAPGEF1-204ENST00000414781 BAZ1AQ9NRL2 1556 aaPredicted RBP26.9■■□□□ 1.9
RAPGEF1-204ENST00000414781 MRC2Q9UBG0 1479 aa26.87■■□□□ 1.89
RAPGEF1-204ENST00000414781 WDR62O43379 1518 aa26.81■■□□□ 1.88
RAPGEF1-204ENST00000414781 OSCARQ8IYS5 282 aa26.8■■□□□ 1.88
RAPGEF1-204ENST00000414781 CADPSQ9ULU8 1353 aa26.76■■□□□ 1.87
RAPGEF1-204ENST00000414781 CEP164Q9UPV0 1460 aa26.56■■□□□ 1.84
RAPGEF1-204ENST00000414781 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
RAPGEF1-204ENST00000414781 RIMBP3CA6NJZ7 1639 aa26.46■■□□□ 1.83
RAPGEF1-204ENST00000414781 RIMBP3BA6NNM3 1639 aa26.46■■□□□ 1.83
RAPGEF1-204ENST00000414781 RIMBP3Q9UFD9 1639 aa26.46■■□□□ 1.83
RAPGEF1-204ENST00000414781 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
RAPGEF1-204ENST00000414781 ARHGEF11O15085 1522 aa26.34■■□□□ 1.81
RAPGEF1-204ENST00000414781 CFTRP13569 1480 aa26.26■■□□□ 1.79
RAPGEF1-204ENST00000414781 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
RAPGEF1-204ENST00000414781 TRHP20396 242 aaPredicted RBP26.19■■□□□ 1.78
RAPGEF1-204ENST00000414781 CYB5RLQ6IPT4 315 aa26.17■■□□□ 1.78
RAPGEF1-204ENST00000414781 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
RAPGEF1-204ENST00000414781 WIZO95785 1651 aa26.12■■□□□ 1.77
RAPGEF1-204ENST00000414781 IFT140Q96RY7 1462 aa26.1■■□□□ 1.77
RAPGEF1-204ENST00000414781 ZNF608Q9ULD9 1512 aaPredicted RBP26.04■■□□□ 1.76
RAPGEF1-204ENST00000414781 ARAP1Q96P48 1450 aa26■■□□□ 1.75
RAPGEF1-204ENST00000414781 RSF1Q96T23 1441 aaPredicted RBP25.95■■□□□ 1.74
RAPGEF1-204ENST00000414781 EIF4G3O43432 1585 aaKnown RBP25.86■■□□□ 1.73
RAPGEF1-204ENST00000414781 TOP2AP11388 1531 aaKnown RBP25.84■■□□□ 1.73
RAPGEF1-204ENST00000414781 TOPBP1Q92547 1522 aa25.81■■□□□ 1.72
RAPGEF1-204ENST00000414781 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
RAPGEF1-204ENST00000414781 ABCC8Q09428 1581 aa25.79■■□□□ 1.72
RAPGEF1-204ENST00000414781 CHD1O14646 1710 aa25.77■■□□□ 1.72
RAPGEF1-204ENST00000414781 FBLN2P98095 1184 aa25.73■■□□□ 1.71
RAPGEF1-204ENST00000414781 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.77e-6■■□□□ 12.2
RAPGEF1-204ENST00000414781 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
RAPGEF1-204ENST00000414781 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
RAPGEF1-204ENST00000414781 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
RAPGEF1-204ENST00000414781 CCDC88BA6NC98 1476 aa25.53■■□□□ 1.68
RAPGEF1-204ENST00000414781 SYNJ1O43426 1573 aa25.49■■□□□ 1.67
RAPGEF1-204ENST00000414781 POLA1P09884 1462 aaPredicted RBP25.49■■□□□ 1.67
RAPGEF1-204ENST00000414781 CHMP7Q8WUX9 453 aaPredicted RBP25.44■■□□□ 1.66
RAPGEF1-204ENST00000414781 SNAPC4Q5SXM2 1469 aa25.44■■□□□ 1.66
RAPGEF1-204ENST00000414781 WDR97A6NE52 1622 aa25.42■■□□□ 1.66
RAPGEF1-204ENST00000414781 TDRD9Q8NDG6 1382 aaKnown RBP25.41■■□□□ 1.66
RAPGEF1-204ENST00000414781 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
RAPGEF1-204ENST00000414781 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
RAPGEF1-204ENST00000414781 SOGA1O94964 1423 aa25.37■■□□□ 1.65
RAPGEF1-204ENST00000414781 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
RAPGEF1-204ENST00000414781 SYNJ2O15056 1496 aa25.32■■□□□ 1.64
RAPGEF1-204ENST00000414781 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
RAPGEF1-204ENST00000414781 FGD5Q6ZNL6 1462 aa25.2■■□□□ 1.62
RAPGEF1-204ENST00000414781 ILDR1Q86SU0 546 aaPredicted RBP25.08■■□□□ 1.61
RAPGEF1-204ENST00000414781 CUX1P39880 1505 aa25.01■■□□□ 1.59
RAPGEF1-204ENST00000414781 ERCC6L2Q5T890 1561 aa25.01■■□□□ 1.59
RAPGEF1-204ENST00000414781 PBRM1Q86U86 1689 aa25■■□□□ 1.59
RAPGEF1-204ENST00000414781 CEP170Q5SW79 1584 aa24.96■■□□□ 1.59
RAPGEF1-204ENST00000414781 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
RAPGEF1-204ENST00000414781 KIF13AQ9H1H9 1805 aa24.94■■□□□ 1.58
RAPGEF1-204ENST00000414781 NUP160Q12769 1436 aa24.92■■□□□ 1.58
RAPGEF1-204ENST00000414781 ABCA10Q8WWZ4 1543 aa24.9■■□□□ 1.58
RAPGEF1-204ENST00000414781 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
RAPGEF1-204ENST00000414781 KDM4FA0A1W2PPD8 638 aa24.88■■□□□ 1.57
RAPGEF1-204ENST00000414781 SHROOM2Q13796 1616 aa24.86■■□□□ 1.57
RAPGEF1-204ENST00000414781 ABCC10Q5T3U5 1492 aa24.83■■□□□ 1.57
RAPGEF1-204ENST00000414781 FAM69CQ0P6D2 419 aa24.83■■□□□ 1.57
RAPGEF1-204ENST00000414781 ADAMTS12P58397 1594 aa24.79■■□□□ 1.56
RAPGEF1-204ENST00000414781 NPM1P06748 294 aaKnown RBP eCLIP24.75■■□□□ 1.55
RAPGEF1-204ENST00000414781 MAPKBP1O60336 1514 aa24.75■■□□□ 1.55
RAPGEF1-204ENST00000414781 KDM6BO15054 1643 aa24.74■■□□□ 1.55
RAPGEF1-204ENST00000414781 FHAD1B1AJZ9 1412 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms