RNA–Protein interactions for RNA: ENST00000414693.1

SDHDP6-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 6, humanhuman

BASIC

Gene SDHDP6, Length 480 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP6-201ENST00000414693 NISCHQ9Y2I1 1504 aa14.45□□□□□ -0.1
SDHDP6-201ENST00000414693 CCDC180Q9P1Z9 1646 aa13.05□□□□□ -0.32
SDHDP6-201ENST00000414693 ABCC9O60706 1549 aa13.03□□□□□ -0.32
SDHDP6-201ENST00000414693 RB1CC1Q8TDY2 1594 aa12.49□□□□□ -0.41
SDHDP6-201ENST00000414693 NACADO15069 1562 aa12.41□□□□□ -0.42
SDHDP6-201ENST00000414693 DNAJC5BQ9UF47 199 aa12.31□□□□□ -0.44
SDHDP6-201ENST00000414693 MYO15BQ96JP2 1530 aa12.27□□□□□ -0.44
SDHDP6-201ENST00000414693 DCAF8L2P0C7V8 631 aa12.2□□□□□ -0.46
SDHDP6-201ENST00000414693 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
SDHDP6-201ENST00000414693 SHROOM4Q9ULL8 1493 aa12.08□□□□□ -0.48
SDHDP6-201ENST00000414693 UNC13AQ9UPW8 1703 aa12.05□□□□□ -0.48
SDHDP6-201ENST00000414693 DCAF1Q9Y4B6 1507 aa12.03□□□□□ -0.48
SDHDP6-201ENST00000414693 BICRAQ9NZM4 1560 aa12.01□□□□□ -0.49
SDHDP6-201ENST00000414693 ZCCHC6Q5VYS8 1495 aaKnown RBP11.92□□□□□ -0.5
SDHDP6-201ENST00000414693 CECR2Q9BXF3 1484 aa11.83□□□□□ -0.52
SDHDP6-201ENST00000414693 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
SDHDP6-201ENST00000414693 EIF4G1Q04637 1599 aaKnown RBP11.78□□□□□ -0.52
SDHDP6-201ENST00000414693 SCRIBQ14160 1630 aa11.72□□□□□ -0.53
SDHDP6-201ENST00000414693 DNAJC5Q9H3Z4 198 aa11.56□□□□□ -0.56
SDHDP6-201ENST00000414693 NCAPD3P42695 1498 aa11.45□□□□□ -0.58
SDHDP6-201ENST00000414693 CUX2O14529 1486 aa11.44□□□□□ -0.58
SDHDP6-201ENST00000414693 SMARCA2P51531 1590 aa11.36□□□□□ -0.59
SDHDP6-201ENST00000414693 ERCC6Q03468 1493 aa11.35□□□□□ -0.59
SDHDP6-201ENST00000414693 ATAD2BQ9ULI0 1458 aa11.33□□□□□ -0.6
SDHDP6-201ENST00000414693 HMGXB3Q12766 1538 aa11.33□□□□□ -0.6
SDHDP6-201ENST00000414693 BAZ1AQ9NRL2 1556 aaPredicted RBP11.26□□□□□ -0.61
SDHDP6-201ENST00000414693 SMARCA4P51532 1647 aa11.25□□□□□ -0.61
SDHDP6-201ENST00000414693 PEG3Q9GZU2 1588 aa11.23□□□□□ -0.61
SDHDP6-201ENST00000414693 BAZ1BQ9UIG0 1483 aaKnown RBP11.22□□□□□ -0.61
SDHDP6-201ENST00000414693 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
SDHDP6-201ENST00000414693 PDS5BQ9NTI5 1447 aa11.18□□□□□ -0.62
SDHDP6-201ENST00000414693 NESP48681 1621 aa11.13□□□□□ -0.63
SDHDP6-201ENST00000414693 CADPSQ9ULU8 1353 aa11.09□□□□□ -0.63
SDHDP6-201ENST00000414693 THOC2Q8NI27 1593 aaKnown RBP11.08□□□□□ -0.64
SDHDP6-201ENST00000414693 MROH2BQ7Z745 1585 aa11.04□□□□□ -0.64
SDHDP6-201ENST00000414693 MRC2Q9UBG0 1479 aa11□□□□□ -0.65
SDHDP6-201ENST00000414693 KIF21AQ7Z4S6 1674 aa10.99□□□□□ -0.65
SDHDP6-201ENST00000414693 WDR62O43379 1518 aa10.98□□□□□ -0.65
SDHDP6-201ENST00000414693 CEP164Q9UPV0 1460 aa10.94□□□□□ -0.66
SDHDP6-201ENST00000414693 OSCARQ8IYS5 282 aa10.93□□□□□ -0.66
SDHDP6-201ENST00000414693 CFTRP13569 1480 aa10.92□□□□□ -0.66
SDHDP6-201ENST00000414693 FANCD2Q9BXW9 1451 aa10.91□□□□□ -0.66
SDHDP6-201ENST00000414693 WIZO95785 1651 aa10.88□□□□□ -0.67
SDHDP6-201ENST00000414693 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
SDHDP6-201ENST00000414693 RSF1Q96T23 1441 aaPredicted RBP10.84□□□□□ -0.67
SDHDP6-201ENST00000414693 TOP2AP11388 1531 aaKnown RBP10.82□□□□□ -0.68
SDHDP6-201ENST00000414693 ABCC8Q09428 1581 aa10.81□□□□□ -0.68
SDHDP6-201ENST00000414693 IFT140Q96RY7 1462 aa10.76□□□□□ -0.69
SDHDP6-201ENST00000414693 URB2Q14146 1524 aaKnown RBP10.76□□□□□ -0.69
SDHDP6-201ENST00000414693 PRDM2Q13029 1718 aa10.75□□□□□ -0.69
SDHDP6-201ENST00000414693 CCDC88BA6NC98 1476 aa10.68□□□□□ -0.7
SDHDP6-201ENST00000414693 TOPBP1Q92547 1522 aa10.67□□□□□ -0.7
SDHDP6-201ENST00000414693 DNMBPQ6XZF7 1577 aa10.64□□□□□ -0.71
SDHDP6-201ENST00000414693 RIMBP3CA6NJZ7 1639 aa10.63□□□□□ -0.71
SDHDP6-201ENST00000414693 RIMBP3BA6NNM3 1639 aa10.63□□□□□ -0.71
SDHDP6-201ENST00000414693 RIMBP3Q9UFD9 1639 aa10.63□□□□□ -0.71
SDHDP6-201ENST00000414693 ARHGEF11O15085 1522 aa10.63□□□□□ -0.71
SDHDP6-201ENST00000414693 ZNF608Q9ULD9 1512 aaPredicted RBP10.62□□□□□ -0.71
SDHDP6-201ENST00000414693 WDR97A6NE52 1622 aa10.6□□□□□ -0.71
SDHDP6-201ENST00000414693 CYB5RLQ6IPT4 315 aa10.58□□□□□ -0.72
SDHDP6-201ENST00000414693 EIF4G3O43432 1585 aaKnown RBP10.57□□□□□ -0.72
SDHDP6-201ENST00000414693 TARBP1Q13395 1621 aaKnown RBP10.57□□□□□ -0.72
SDHDP6-201ENST00000414693 SOGA1O94964 1423 aa10.55□□□□□ -0.72
SDHDP6-201ENST00000414693 AQRO60306 1485 aaKnown RBP eCLIP10.55□□□□□ -0.72
SDHDP6-201ENST00000414693 FBLN2P98095 1184 aa10.54□□□□□ -0.72
SDHDP6-201ENST00000414693 POLA1P09884 1462 aaPredicted RBP10.54□□□□□ -0.72
SDHDP6-201ENST00000414693 CHMP7Q8WUX9 453 aaPredicted RBP10.52□□□□□ -0.73
SDHDP6-201ENST00000414693 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
SDHDP6-201ENST00000414693 TRHP20396 242 aaPredicted RBP10.51□□□□□ -0.73
SDHDP6-201ENST00000414693 CHD1O14646 1710 aa10.5□□□□□ -0.73
SDHDP6-201ENST00000414693 ARAP1Q96P48 1450 aa10.49□□□□□ -0.73
SDHDP6-201ENST00000414693 SYNJ1O43426 1573 aa10.48□□□□□ -0.73
SDHDP6-201ENST00000414693 TDRD9Q8NDG6 1382 aaKnown RBP10.48□□□□□ -0.73
SDHDP6-201ENST00000414693 GRIN2BQ13224 1484 aa10.48□□□□□ -0.73
SDHDP6-201ENST00000414693 SYNJ2O15056 1496 aa10.45□□□□□ -0.74
SDHDP6-201ENST00000414693 RAD54L2Q9Y4B4 1467 aa10.45□□□□□ -0.74
SDHDP6-201ENST00000414693 FGD5Q6ZNL6 1462 aa10.44□□□□□ -0.74
SDHDP6-201ENST00000414693 CLASP1Q7Z460 1538 aa10.43□□□□□ -0.74
SDHDP6-201ENST00000414693 SNAPC4Q5SXM2 1469 aa10.43□□□□□ -0.74
SDHDP6-201ENST00000414693 GAPVD1Q14C86 1478 aa10.41□□□□□ -0.74
SDHDP6-201ENST00000414693 CUX1P39880 1505 aa10.4□□□□□ -0.74
SDHDP6-201ENST00000414693 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
SDHDP6-201ENST00000414693 WRNQ14191 1432 aaPredicted RBP eCLIP10.36□□□□□ -0.75
SDHDP6-201ENST00000414693 AEBP2Q6ZN18 517 aaPredicted RBP10.36□□□□□ -0.75
SDHDP6-201ENST00000414693 PBRM1Q86U86 1689 aa10.32□□□□□ -0.76
SDHDP6-201ENST00000414693 ABCA5Q8WWZ7 1642 aa10.31□□□□□ -0.76
SDHDP6-201ENST00000414693 GRIN2AQ12879 1464 aa10.3□□□□□ -0.76
SDHDP6-201ENST00000414693 FHAD1B1AJZ9 1412 aa10.3□□□□□ -0.76
SDHDP6-201ENST00000414693 NUP160Q12769 1436 aa10.3□□□□□ -0.76
SDHDP6-201ENST00000414693 ERICH3Q5RHP9 1530 aa10.28□□□□□ -0.76
SDHDP6-201ENST00000414693 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
SDHDP6-201ENST00000414693 CEP170Q5SW79 1584 aa10.24□□□□□ -0.77
SDHDP6-201ENST00000414693 NPM1P06748 294 aaKnown RBP eCLIP10.24□□□□□ -0.77
SDHDP6-201ENST00000414693 JPH4Q96JJ6 628 aa10.24□□□□□ -0.77
SDHDP6-201ENST00000414693 SHROOM2Q13796 1616 aa10.24□□□□□ -0.77
SDHDP6-201ENST00000414693 BIVM-ERCC5R4GMW8 1640 aa10.24□□□□□ -0.77
SDHDP6-201ENST00000414693 ADAMTS12P58397 1594 aa10.23□□□□□ -0.77
SDHDP6-201ENST00000414693 SUPT5HO00267 1087 aaKnown RBP10.2□□□□□ -0.78
SDHDP6-201ENST00000414693 PRG4Q92954 1404 aaPredicted RBP10.19□□□□□ -0.78
SDHDP6-201ENST00000414693 MAPKBP1O60336 1514 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms