RNA–Protein interactions for RNA: ENST00000414130.1

HMGA1P8-201, Transcript of high mobility group AT-hook 1 pseudogene 8, humanhuman

BASIC

Gene HMGA1P8, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P8-201ENST00000414130 NISCHQ9Y2I1 1504 aa13.5□□□□□ -0.25
HMGA1P8-201ENST00000414130 CCDC180Q9P1Z9 1646 aa12.19□□□□□ -0.46
HMGA1P8-201ENST00000414130 ABCC9O60706 1549 aa12.1□□□□□ -0.47
HMGA1P8-201ENST00000414130 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
HMGA1P8-201ENST00000414130 NACADO15069 1562 aa11.54□□□□□ -0.56
HMGA1P8-201ENST00000414130 MYO15BQ96JP2 1530 aa11.4□□□□□ -0.58
HMGA1P8-201ENST00000414130 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
HMGA1P8-201ENST00000414130 DNAJC5BQ9UF47 199 aa11.26□□□□□ -0.61
HMGA1P8-201ENST00000414130 DCAF1Q9Y4B6 1507 aa11.23□□□□□ -0.61
HMGA1P8-201ENST00000414130 SHROOM4Q9ULL8 1493 aa11.22□□□□□ -0.61
HMGA1P8-201ENST00000414130 UNC13AQ9UPW8 1703 aa11.21□□□□□ -0.61
HMGA1P8-201ENST00000414130 ZCCHC6Q5VYS8 1495 aaKnown RBP11.21□□□□□ -0.61
HMGA1P8-201ENST00000414130 PABPN1Q86U42 306 aaKnown RBP eCLIP11.21□□□□□ -0.61
HMGA1P8-201ENST00000414130 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
HMGA1P8-201ENST00000414130 SCRIBQ14160 1630 aa11□□□□□ -0.65
HMGA1P8-201ENST00000414130 CC2D2AQ9P2K1 1620 aa10.95□□□□□ -0.66
HMGA1P8-201ENST00000414130 CECR2Q9BXF3 1484 aa10.95□□□□□ -0.66
HMGA1P8-201ENST00000414130 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
HMGA1P8-201ENST00000414130 NCAPD3P42695 1498 aa10.62□□□□□ -0.71
HMGA1P8-201ENST00000414130 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
HMGA1P8-201ENST00000414130 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
HMGA1P8-201ENST00000414130 HMGXB3Q12766 1538 aa10.56□□□□□ -0.72
HMGA1P8-201ENST00000414130 CUX2O14529 1486 aa10.55□□□□□ -0.72
HMGA1P8-201ENST00000414130 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
HMGA1P8-201ENST00000414130 ERCC6Q03468 1493 aa10.54□□□□□ -0.72
HMGA1P8-201ENST00000414130 BAZ1AQ9NRL2 1556 aaPredicted RBP10.53□□□□□ -0.72
HMGA1P8-201ENST00000414130 SMARCA4P51532 1647 aa10.53□□□□□ -0.72
HMGA1P8-201ENST00000414130 DNAJC5Q9H3Z4 198 aa10.5□□□□□ -0.73
HMGA1P8-201ENST00000414130 BAZ1BQ9UIG0 1483 aaKnown RBP10.48□□□□□ -0.73
HMGA1P8-201ENST00000414130 PEG3Q9GZU2 1588 aa10.48□□□□□ -0.73
HMGA1P8-201ENST00000414130 LAMC3Q9Y6N6 1575 aa10.41□□□□□ -0.74
HMGA1P8-201ENST00000414130 CHIC1Q5VXU3 224 aa10.41□□□□□ -0.74
HMGA1P8-201ENST00000414130 PDS5BQ9NTI5 1447 aa10.37□□□□□ -0.75
HMGA1P8-201ENST00000414130 RSF1Q96T23 1441 aaPredicted RBP10.35□□□□□ -0.75
HMGA1P8-201ENST00000414130 NESP48681 1621 aa10.34□□□□□ -0.75
HMGA1P8-201ENST00000414130 MROH2BQ7Z745 1585 aa10.34□□□□□ -0.75
HMGA1P8-201ENST00000414130 THOC2Q8NI27 1593 aaKnown RBP10.31□□□□□ -0.76
HMGA1P8-201ENST00000414130 CADPSQ9ULU8 1353 aa10.28□□□□□ -0.76
HMGA1P8-201ENST00000414130 KIF21AQ7Z4S6 1674 aa10.25□□□□□ -0.77
HMGA1P8-201ENST00000414130 MRC2Q9UBG0 1479 aa10.23□□□□□ -0.77
HMGA1P8-201ENST00000414130 CEP164Q9UPV0 1460 aa10.21□□□□□ -0.78
HMGA1P8-201ENST00000414130 WDR62O43379 1518 aa10.21□□□□□ -0.78
HMGA1P8-201ENST00000414130 WIZO95785 1651 aa10.21□□□□□ -0.78
HMGA1P8-201ENST00000414130 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
HMGA1P8-201ENST00000414130 CFTRP13569 1480 aa10.17□□□□□ -0.78
HMGA1P8-201ENST00000414130 FANCD2Q9BXW9 1451 aa10.16□□□□□ -0.78
HMGA1P8-201ENST00000414130 PRDM2Q13029 1718 aa10.07□□□□□ -0.8
HMGA1P8-201ENST00000414130 TRIM41Q8WV44 630 aa10.05□□□□□ -0.8
HMGA1P8-201ENST00000414130 OSCARQ8IYS5 282 aa10.04□□□□□ -0.8
HMGA1P8-201ENST00000414130 ABCC8Q09428 1581 aa10.04□□□□□ -0.8
HMGA1P8-201ENST00000414130 URB2Q14146 1524 aaKnown RBP10.02□□□□□ -0.8
HMGA1P8-201ENST00000414130 IFT140Q96RY7 1462 aa10.01□□□□□ -0.81
HMGA1P8-201ENST00000414130 EEA1Q15075 1411 aa9.99□□□□□ -0.81
HMGA1P8-201ENST00000414130 CCDC88BA6NC98 1476 aa9.99□□□□□ -0.81
HMGA1P8-201ENST00000414130 HRCP23327 699 aa9.98□□□□□ -0.81
HMGA1P8-201ENST00000414130 TRIM26Q12899 539 aaPredicted RBP9.95□□□□□ -0.82
HMGA1P8-201ENST00000414130 DNMBPQ6XZF7 1577 aa9.94□□□□□ -0.82
HMGA1P8-201ENST00000414130 TOPBP1Q92547 1522 aa9.94□□□□□ -0.82
HMGA1P8-201ENST00000414130 EIF4G3O43432 1585 aaKnown RBP9.89□□□□□ -0.83
HMGA1P8-201ENST00000414130 ZEB1P37275 1124 aaPredicted RBP9.89□□□□□ -0.83
HMGA1P8-201ENST00000414130 WDR97A6NE52 1622 aa9.89□□□□□ -0.83
HMGA1P8-201ENST00000414130 ZNF608Q9ULD9 1512 aaPredicted RBP9.88□□□□□ -0.83
HMGA1P8-201ENST00000414130 LOC105371045A0A1W2PR82 267 aa9.86□□□□□ -0.83
HMGA1P8-201ENST00000414130 PCGF6Q9BYE7 350 aa9.86□□□□□ -0.83
HMGA1P8-201ENST00000414130 RIMBP3CA6NJZ7 1639 aa9.85□□□□□ -0.83
HMGA1P8-201ENST00000414130 RIMBP3BA6NNM3 1639 aa9.85□□□□□ -0.83
HMGA1P8-201ENST00000414130 TARBP1Q13395 1621 aaKnown RBP9.85□□□□□ -0.83
HMGA1P8-201ENST00000414130 RIMBP3Q9UFD9 1639 aa9.85□□□□□ -0.83
HMGA1P8-201ENST00000414130 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
HMGA1P8-201ENST00000414130 ARHGEF11O15085 1522 aa9.84□□□□□ -0.83
HMGA1P8-201ENST00000414130 SOGA1O94964 1423 aa9.82□□□□□ -0.84
HMGA1P8-201ENST00000414130 WRNQ14191 1432 aaPredicted RBP eCLIP9.82□□□□□ -0.84
HMGA1P8-201ENST00000414130 AQRO60306 1485 aaKnown RBP eCLIP9.8□□□□□ -0.84
HMGA1P8-201ENST00000414130 CHD1O14646 1710 aa9.79□□□□□ -0.84
HMGA1P8-201ENST00000414130 MAGI1Q96QZ7 1491 aaPredicted RBP9.79□□□□□ -0.84
HMGA1P8-201ENST00000414130 TNIKQ9UKE5 1360 aa9.78□□□□□ -0.84
HMGA1P8-201ENST00000414130 FBLN2P98095 1184 aa9.78□□□□□ -0.84
HMGA1P8-201ENST00000414130 FGD5Q6ZNL6 1462 aa9.78□□□□□ -0.84
HMGA1P8-201ENST00000414130 GRIN2BQ13224 1484 aa9.77□□□□□ -0.85
HMGA1P8-201ENST00000414130 SYNJ1O43426 1573 aa9.76□□□□□ -0.85
HMGA1P8-201ENST00000414130 CHMP7Q8WUX9 453 aaPredicted RBP9.75□□□□□ -0.85
HMGA1P8-201ENST00000414130 TDRD9Q8NDG6 1382 aaKnown RBP9.75□□□□□ -0.85
HMGA1P8-201ENST00000414130 SNAPC4Q5SXM2 1469 aa9.74□□□□□ -0.85
HMGA1P8-201ENST00000414130 RAD54L2Q9Y4B4 1467 aa9.74□□□□□ -0.85
HMGA1P8-201ENST00000414130 CYB5RLQ6IPT4 315 aa9.74□□□□□ -0.85
HMGA1P8-201ENST00000414130 SYNJ2O15056 1496 aa9.73□□□□□ -0.85
HMGA1P8-201ENST00000414130 GOLGA3Q08378 1498 aa9.73□□□□□ -0.85
HMGA1P8-201ENST00000414130 CUX1P39880 1505 aa9.73□□□□□ -0.85
HMGA1P8-201ENST00000414130 KIF21BO75037 1637 aa9.72□□□□□ -0.85
HMGA1P8-201ENST00000414130 CSRNP3Q8WYN3 585 aa9.71□□□□□ -0.86
HMGA1P8-201ENST00000414130 ARAP1Q96P48 1450 aa9.71□□□□□ -0.86
HMGA1P8-201ENST00000414130 CLASP1Q7Z460 1538 aa9.71□□□□□ -0.86
HMGA1P8-201ENST00000414130 GAPVD1Q14C86 1478 aa9.7□□□□□ -0.86
HMGA1P8-201ENST00000414130 ABCA10Q8WWZ4 1543 aa9.7□□□□□ -0.86
HMGA1P8-201ENST00000414130 CEP162Q5TB80 1403 aa9.68□□□□□ -0.86
HMGA1P8-201ENST00000414130 TRHP20396 242 aaPredicted RBP9.68□□□□□ -0.86
HMGA1P8-201ENST00000414130 FAM9AQ8IZU1 332 aaPredicted RBP9.68□□□□□ -0.86
HMGA1P8-201ENST00000414130 PBRM1Q86U86 1689 aa9.67□□□□□ -0.86
HMGA1P8-201ENST00000414130 TOP2BQ02880 1626 aa9.67□□□□□ -0.86
HMGA1P8-201ENST00000414130 ABCA5Q8WWZ7 1642 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms