RNA–Protein interactions for RNA: ENST00000413901.1

AL353604.1-201, humanhuman

TSL 3 BASIC

Gene AL353604.1, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353604.1-201ENST00000413901 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
AL353604.1-201ENST00000413901 NISCHQ9Y2I1 1504 aa21.84■■□□□ 1.09
AL353604.1-201ENST00000413901 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
AL353604.1-201ENST00000413901 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
AL353604.1-201ENST00000413901 ABCC9O60706 1549 aa19.38■□□□□ 0.69
AL353604.1-201ENST00000413901 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
AL353604.1-201ENST00000413901 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
AL353604.1-201ENST00000413901 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
AL353604.1-201ENST00000413901 RB1CC1Q8TDY2 1594 aa18.36■□□□□ 0.53
AL353604.1-201ENST00000413901 NACADO15069 1562 aa18.31■□□□□ 0.52
AL353604.1-201ENST00000413901 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
AL353604.1-201ENST00000413901 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
AL353604.1-201ENST00000413901 ZCCHC6Q5VYS8 1495 aaKnown RBP18.17■□□□□ 0.5
AL353604.1-201ENST00000413901 DCAF1Q9Y4B6 1507 aa18.09■□□□□ 0.49
AL353604.1-201ENST00000413901 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
AL353604.1-201ENST00000413901 UNC13AQ9UPW8 1703 aa17.95■□□□□ 0.46
AL353604.1-201ENST00000413901 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
AL353604.1-201ENST00000413901 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
AL353604.1-201ENST00000413901 FOXD1Q16676 465 aa17.69■□□□□ 0.42
AL353604.1-201ENST00000413901 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
AL353604.1-201ENST00000413901 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
AL353604.1-201ENST00000413901 CECR2Q9BXF3 1484 aa17.47■□□□□ 0.39
AL353604.1-201ENST00000413901 EIF4G1Q04637 1599 aaKnown RBP17.44■□□□□ 0.38
AL353604.1-201ENST00000413901 DNAJC5Q9H3Z4 198 aa17.27■□□□□ 0.36
AL353604.1-201ENST00000413901 SMARCA4P51532 1647 aa16.96■□□□□ 0.3
AL353604.1-201ENST00000413901 BAZ1AQ9NRL2 1556 aaPredicted RBP16.95■□□□□ 0.3
AL353604.1-201ENST00000413901 NCAPD3P42695 1498 aa16.92■□□□□ 0.3
AL353604.1-201ENST00000413901 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
AL353604.1-201ENST00000413901 SMARCA2P51531 1590 aa16.88■□□□□ 0.29
AL353604.1-201ENST00000413901 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
AL353604.1-201ENST00000413901 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
AL353604.1-201ENST00000413901 PEG3Q9GZU2 1588 aa16.8■□□□□ 0.28
AL353604.1-201ENST00000413901 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
AL353604.1-201ENST00000413901 CUX2O14529 1486 aa16.75■□□□□ 0.27
AL353604.1-201ENST00000413901 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
AL353604.1-201ENST00000413901 MSH5O43196 834 aa16.69■□□□□ 0.26
AL353604.1-201ENST00000413901 ERCC6Q03468 1493 aa16.67■□□□□ 0.26
AL353604.1-201ENST00000413901 NESP48681 1621 aa16.65■□□□□ 0.26
AL353604.1-201ENST00000413901 WIZO95785 1651 aa16.63■□□□□ 0.25
AL353604.1-201ENST00000413901 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
AL353604.1-201ENST00000413901 PIAS4Q8N2W9 510 aaPredicted RBP16.56■□□□□ 0.24
AL353604.1-201ENST00000413901 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
AL353604.1-201ENST00000413901 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
AL353604.1-201ENST00000413901 THOC2Q8NI27 1593 aaKnown RBP16.46■□□□□ 0.23
AL353604.1-201ENST00000413901 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
AL353604.1-201ENST00000413901 ADRA2BP18089 450 aa16.42■□□□□ 0.22
AL353604.1-201ENST00000413901 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
AL353604.1-201ENST00000413901 PDS5BQ9NTI5 1447 aa16.38■□□□□ 0.21
AL353604.1-201ENST00000413901 KIF21AQ7Z4S6 1674 aa16.35■□□□□ 0.21
AL353604.1-201ENST00000413901 POTEDQ86YR6 584 aa16.31■□□□□ 0.2
AL353604.1-201ENST00000413901 TRIM41Q8WV44 630 aa16.31■□□□□ 0.2
AL353604.1-201ENST00000413901 CFTRP13569 1480 aa16.28■□□□□ 0.2
AL353604.1-201ENST00000413901 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.19
AL353604.1-201ENST00000413901 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
AL353604.1-201ENST00000413901 WDR62O43379 1518 aa16.22■□□□□ 0.19
AL353604.1-201ENST00000413901 FANCD2Q9BXW9 1451 aa16.19■□□□□ 0.18
AL353604.1-201ENST00000413901 SUPT5HO00267 1087 aaKnown RBP16.19■□□□□ 0.18
AL353604.1-201ENST00000413901 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
AL353604.1-201ENST00000413901 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
AL353604.1-201ENST00000413901 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
AL353604.1-201ENST00000413901 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
AL353604.1-201ENST00000413901 ABCC8Q09428 1581 aa15.98■□□□□ 0.15
AL353604.1-201ENST00000413901 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
AL353604.1-201ENST00000413901 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
AL353604.1-201ENST00000413901 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
AL353604.1-201ENST00000413901 IFT140Q96RY7 1462 aa15.85■□□□□ 0.13
AL353604.1-201ENST00000413901 CUX1P39880 1505 aa15.78■□□□□ 0.12
AL353604.1-201ENST00000413901 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
AL353604.1-201ENST00000413901 RIMBP3CA6NJZ7 1639 aa15.76■□□□□ 0.11
AL353604.1-201ENST00000413901 RIMBP3BA6NNM3 1639 aa15.76■□□□□ 0.11
AL353604.1-201ENST00000413901 RIMBP3Q9UFD9 1639 aa15.76■□□□□ 0.11
AL353604.1-201ENST00000413901 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
AL353604.1-201ENST00000413901 SOGA1O94964 1423 aa15.74■□□□□ 0.11
AL353604.1-201ENST00000413901 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
AL353604.1-201ENST00000413901 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.11
AL353604.1-201ENST00000413901 ARHGEF11O15085 1522 aa15.71■□□□□ 0.11
AL353604.1-201ENST00000413901 RAD54L2Q9Y4B4 1467 aa15.7■□□□□ 0.1
AL353604.1-201ENST00000413901 EIF4G3O43432 1585 aaKnown RBP15.7■□□□□ 0.1
AL353604.1-201ENST00000413901 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
AL353604.1-201ENST00000413901 WDR97A6NE52 1622 aa15.67■□□□□ 0.1
AL353604.1-201ENST00000413901 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
AL353604.1-201ENST00000413901 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
AL353604.1-201ENST00000413901 CYB5RLQ6IPT4 315 aa15.64■□□□□ 0.09
AL353604.1-201ENST00000413901 TDRD9Q8NDG6 1382 aaKnown RBP15.63■□□□□ 0.09
AL353604.1-201ENST00000413901 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
AL353604.1-201ENST00000413901 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
AL353604.1-201ENST00000413901 CHD1O14646 1710 aa15.58■□□□□ 0.08
AL353604.1-201ENST00000413901 FBLN2P98095 1184 aa15.57■□□□□ 0.08
AL353604.1-201ENST00000413901 ARAP1Q96P48 1450 aa15.57■□□□□ 0.08
AL353604.1-201ENST00000413901 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
AL353604.1-201ENST00000413901 GAPVD1Q14C86 1478 aa15.55■□□□□ 0.08
AL353604.1-201ENST00000413901 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
AL353604.1-201ENST00000413901 ABCA5Q8WWZ7 1642 aa15.53■□□□□ 0.08
AL353604.1-201ENST00000413901 PBRM1Q86U86 1689 aa15.52■□□□□ 0.08
AL353604.1-201ENST00000413901 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.07
AL353604.1-201ENST00000413901 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
AL353604.1-201ENST00000413901 CLASP1Q7Z460 1538 aa15.48■□□□□ 0.07
AL353604.1-201ENST00000413901 SYNJ2O15056 1496 aa15.46■□□□□ 0.07
AL353604.1-201ENST00000413901 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
AL353604.1-201ENST00000413901 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms