RNA–Protein interactions for RNA: ENST00000413805.2

HMGN1P37-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 37, humanhuman

BASIC

Gene HMGN1P37, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P37-201ENST00000413805 NISCHQ9Y2I1 1504 aa27.66■■■□□ 2.02
HMGN1P37-201ENST00000413805 CCDC180Q9P1Z9 1646 aa24.71■■□□□ 1.55
HMGN1P37-201ENST00000413805 ABCC9O60706 1549 aa24.64■■□□□ 1.53
HMGN1P37-201ENST00000413805 DCAF8L2P0C7V8 631 aa23.54■■□□□ 1.36
HMGN1P37-201ENST00000413805 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
HMGN1P37-201ENST00000413805 NACADO15069 1562 aa23.32■■□□□ 1.32
HMGN1P37-201ENST00000413805 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
HMGN1P37-201ENST00000413805 PABPN1Q86U42 306 aaKnown RBP eCLIP23.02■■□□□ 1.28
HMGN1P37-201ENST00000413805 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
HMGN1P37-201ENST00000413805 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.26
HMGN1P37-201ENST00000413805 ZCCHC6Q5VYS8 1495 aaKnown RBP22.92■■□□□ 1.26
HMGN1P37-201ENST00000413805 DNAJC5BQ9UF47 199 aa22.88■■□□□ 1.25
HMGN1P37-201ENST00000413805 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
HMGN1P37-201ENST00000413805 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
HMGN1P37-201ENST00000413805 SCRIBQ14160 1630 aa22.64■■□□□ 1.22
HMGN1P37-201ENST00000413805 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
HMGN1P37-201ENST00000413805 SHROOM4Q9ULL8 1493 aa22.36■■□□□ 1.17
HMGN1P37-201ENST00000413805 CC2D2AQ9P2K1 1620 aa22.22■■□□□ 1.15
HMGN1P37-201ENST00000413805 EIF4G1Q04637 1599 aaKnown RBP22.19■■□□□ 1.14
HMGN1P37-201ENST00000413805 CECR2Q9BXF3 1484 aa22.13■■□□□ 1.13
HMGN1P37-201ENST00000413805 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
HMGN1P37-201ENST00000413805 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
HMGN1P37-201ENST00000413805 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
HMGN1P37-201ENST00000413805 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
HMGN1P37-201ENST00000413805 BAZ1AQ9NRL2 1556 aaPredicted RBP21.47■■□□□ 1.03
HMGN1P37-201ENST00000413805 HMGXB3Q12766 1538 aa21.36■■□□□ 1.01
HMGN1P37-201ENST00000413805 BAZ1BQ9UIG0 1483 aaKnown RBP21.36■■□□□ 1.01
HMGN1P37-201ENST00000413805 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
HMGN1P37-201ENST00000413805 ERCC6Q03468 1493 aa21.29■■□□□ 1
HMGN1P37-201ENST00000413805 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
HMGN1P37-201ENST00000413805 NESP48681 1621 aa21.2■□□□□ 0.98
HMGN1P37-201ENST00000413805 WIZO95785 1651 aa21.14■□□□□ 0.97
HMGN1P37-201ENST00000413805 CUX2O14529 1486 aa21.06■□□□□ 0.96
HMGN1P37-201ENST00000413805 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.96
HMGN1P37-201ENST00000413805 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.95
HMGN1P37-201ENST00000413805 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
HMGN1P37-201ENST00000413805 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
HMGN1P37-201ENST00000413805 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
HMGN1P37-201ENST00000413805 THOC2Q8NI27 1593 aaKnown RBP20.87■□□□□ 0.93
HMGN1P37-201ENST00000413805 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
HMGN1P37-201ENST00000413805 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
HMGN1P37-201ENST00000413805 MRC2Q9UBG0 1479 aa20.73■□□□□ 0.91
HMGN1P37-201ENST00000413805 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
HMGN1P37-201ENST00000413805 FANCD2Q9BXW9 1451 aa20.7■□□□□ 0.9
HMGN1P37-201ENST00000413805 CFTRP13569 1480 aa20.68■□□□□ 0.9
HMGN1P37-201ENST00000413805 WDR62O43379 1518 aa20.63■□□□□ 0.89
HMGN1P37-201ENST00000413805 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
HMGN1P37-201ENST00000413805 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
HMGN1P37-201ENST00000413805 URB2Q14146 1524 aaKnown RBP20.49■□□□□ 0.87
HMGN1P37-201ENST00000413805 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
HMGN1P37-201ENST00000413805 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
HMGN1P37-201ENST00000413805 ABCC8Q09428 1581 aa20.27■□□□□ 0.84
HMGN1P37-201ENST00000413805 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
HMGN1P37-201ENST00000413805 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
HMGN1P37-201ENST00000413805 OSCARQ8IYS5 282 aa20.23■□□□□ 0.83
HMGN1P37-201ENST00000413805 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
HMGN1P37-201ENST00000413805 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
HMGN1P37-201ENST00000413805 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
HMGN1P37-201ENST00000413805 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.81
HMGN1P37-201ENST00000413805 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
HMGN1P37-201ENST00000413805 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
HMGN1P37-201ENST00000413805 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
HMGN1P37-201ENST00000413805 SOGA1O94964 1423 aa20.08■□□□□ 0.8
HMGN1P37-201ENST00000413805 FBLN2P98095 1184 aa20.07■□□□□ 0.8
HMGN1P37-201ENST00000413805 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
HMGN1P37-201ENST00000413805 CUX1P39880 1505 aa20.03■□□□□ 0.8
HMGN1P37-201ENST00000413805 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
HMGN1P37-201ENST00000413805 CHD1O14646 1710 aa19.97■□□□□ 0.79
HMGN1P37-201ENST00000413805 RIMBP3CA6NJZ7 1639 aa19.91■□□□□ 0.78
HMGN1P37-201ENST00000413805 RIMBP3BA6NNM3 1639 aa19.91■□□□□ 0.78
HMGN1P37-201ENST00000413805 RIMBP3Q9UFD9 1639 aa19.91■□□□□ 0.78
HMGN1P37-201ENST00000413805 SNAPC4Q5SXM2 1469 aa19.89■□□□□ 0.77
HMGN1P37-201ENST00000413805 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
HMGN1P37-201ENST00000413805 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
HMGN1P37-201ENST00000413805 GRIN2BQ13224 1484 aa19.85■□□□□ 0.77
HMGN1P37-201ENST00000413805 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
HMGN1P37-201ENST00000413805 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
HMGN1P37-201ENST00000413805 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
HMGN1P37-201ENST00000413805 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.76
HMGN1P37-201ENST00000413805 CYB5RLQ6IPT4 315 aa19.8■□□□□ 0.76
HMGN1P37-201ENST00000413805 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
HMGN1P37-201ENST00000413805 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.76
HMGN1P37-201ENST00000413805 SYNJ1O43426 1573 aa19.76■□□□□ 0.75
HMGN1P37-201ENST00000413805 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
HMGN1P37-201ENST00000413805 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
HMGN1P37-201ENST00000413805 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
HMGN1P37-201ENST00000413805 SYNJ2O15056 1496 aa19.74■□□□□ 0.75
HMGN1P37-201ENST00000413805 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
HMGN1P37-201ENST00000413805 PHF23Q9BUL5 403 aaPredicted RBP19.72■□□□□ 0.75
HMGN1P37-201ENST00000413805 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
HMGN1P37-201ENST00000413805 ARAP1Q96P48 1450 aa19.64■□□□□ 0.73
HMGN1P37-201ENST00000413805 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
HMGN1P37-201ENST00000413805 GRIN2AQ12879 1464 aa19.59■□□□□ 0.73
HMGN1P37-201ENST00000413805 ADAMTS12P58397 1594 aa19.58■□□□□ 0.73
HMGN1P37-201ENST00000413805 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
HMGN1P37-201ENST00000413805 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
HMGN1P37-201ENST00000413805 CEP170Q5SW79 1584 aa19.5■□□□□ 0.71
HMGN1P37-201ENST00000413805 NUP160Q12769 1436 aa19.45■□□□□ 0.7
HMGN1P37-201ENST00000413805 ERCC6L2Q5T890 1561 aa19.43■□□□□ 0.7
HMGN1P37-201ENST00000413805 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms