RNA–Protein interactions for RNA: ENST00000413402.5

LINC00378-201, long intergenic non-protein coding RNA 378, humanhuman

TSL 5 BASIC

Gene LINC00378, Length 403 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00378-201ENST00000413402 NISCHQ9Y2I1 1504 aa26.1■■□□□ 1.77
LINC00378-201ENST00000413402 ABCC9O60706 1549 aa23.49■■□□□ 1.35
LINC00378-201ENST00000413402 CCDC180Q9P1Z9 1646 aa23.4■■□□□ 1.34
LINC00378-201ENST00000413402 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.17
LINC00378-201ENST00000413402 DCAF8L2P0C7V8 631 aa22.32■■□□□ 1.16
LINC00378-201ENST00000413402 NACADO15069 1562 aa22.15■■□□□ 1.14
LINC00378-201ENST00000413402 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
LINC00378-201ENST00000413402 PABPN1Q86U42 306 aaKnown RBP eCLIP21.91■■□□□ 1.1
LINC00378-201ENST00000413402 MYO15BQ96JP2 1530 aa21.76■■□□□ 1.07
LINC00378-201ENST00000413402 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
LINC00378-201ENST00000413402 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
LINC00378-201ENST00000413402 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
LINC00378-201ENST00000413402 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
LINC00378-201ENST00000413402 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
LINC00378-201ENST00000413402 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
LINC00378-201ENST00000413402 CC2D2AQ9P2K1 1620 aa21.16■□□□□ 0.98
LINC00378-201ENST00000413402 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
LINC00378-201ENST00000413402 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
LINC00378-201ENST00000413402 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
LINC00378-201ENST00000413402 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
LINC00378-201ENST00000413402 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
LINC00378-201ENST00000413402 SMARCA4P51532 1647 aa20.36■□□□□ 0.85
LINC00378-201ENST00000413402 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
LINC00378-201ENST00000413402 ERCC6Q03468 1493 aa20.34■□□□□ 0.85
LINC00378-201ENST00000413402 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
LINC00378-201ENST00000413402 HMGXB3Q12766 1538 aa20.27■□□□□ 0.83
LINC00378-201ENST00000413402 BAZ1BQ9UIG0 1483 aaKnown RBP20.24■□□□□ 0.83
LINC00378-201ENST00000413402 CUX2O14529 1486 aa20.18■□□□□ 0.82
LINC00378-201ENST00000413402 NESP48681 1621 aa20.13■□□□□ 0.81
LINC00378-201ENST00000413402 MROH2BQ7Z745 1585 aa20.12■□□□□ 0.81
LINC00378-201ENST00000413402 PEG3Q9GZU2 1588 aa20.09■□□□□ 0.81
LINC00378-201ENST00000413402 LAMC3Q9Y6N6 1575 aa20■□□□□ 0.79
LINC00378-201ENST00000413402 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
LINC00378-201ENST00000413402 WIZO95785 1651 aa19.91■□□□□ 0.78
LINC00378-201ENST00000413402 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
LINC00378-201ENST00000413402 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
LINC00378-201ENST00000413402 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
LINC00378-201ENST00000413402 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
LINC00378-201ENST00000413402 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
LINC00378-201ENST00000413402 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
LINC00378-201ENST00000413402 FANCD2Q9BXW9 1451 aa19.64■□□□□ 0.73
LINC00378-201ENST00000413402 TOP2AP11388 1531 aaKnown RBP19.63■□□□□ 0.73
LINC00378-201ENST00000413402 WDR62O43379 1518 aa19.61■□□□□ 0.73
LINC00378-201ENST00000413402 CFTRP13569 1480 aa19.59■□□□□ 0.73
LINC00378-201ENST00000413402 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
LINC00378-201ENST00000413402 CCDC88BA6NC98 1476 aa19.43■□□□□ 0.7
LINC00378-201ENST00000413402 URB2Q14146 1524 aaKnown RBP19.42■□□□□ 0.7
LINC00378-201ENST00000413402 PRDM2Q13029 1718 aa19.39■□□□□ 0.7
LINC00378-201ENST00000413402 OSCARQ8IYS5 282 aa19.38■□□□□ 0.69
LINC00378-201ENST00000413402 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
LINC00378-201ENST00000413402 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
LINC00378-201ENST00000413402 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
LINC00378-201ENST00000413402 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
LINC00378-201ENST00000413402 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
LINC00378-201ENST00000413402 FBLN2P98095 1184 aa19.11■□□□□ 0.65
LINC00378-201ENST00000413402 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
LINC00378-201ENST00000413402 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.64
LINC00378-201ENST00000413402 SUPT5HO00267 1087 aaKnown RBP19.06■□□□□ 0.64
LINC00378-201ENST00000413402 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
LINC00378-201ENST00000413402 SOGA1O94964 1423 aa19.03■□□□□ 0.64
LINC00378-201ENST00000413402 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
LINC00378-201ENST00000413402 RIMBP3CA6NJZ7 1639 aa19.02■□□□□ 0.64
LINC00378-201ENST00000413402 RIMBP3BA6NNM3 1639 aa19.02■□□□□ 0.64
LINC00378-201ENST00000413402 RIMBP3Q9UFD9 1639 aa19.02■□□□□ 0.64
LINC00378-201ENST00000413402 RAD54L2Q9Y4B4 1467 aa19.01■□□□□ 0.63
LINC00378-201ENST00000413402 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
LINC00378-201ENST00000413402 CHD1O14646 1710 aa18.97■□□□□ 0.63
LINC00378-201ENST00000413402 ARHGEF11O15085 1522 aa18.96■□□□□ 0.63
LINC00378-201ENST00000413402 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
LINC00378-201ENST00000413402 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
LINC00378-201ENST00000413402 CHMP7Q8WUX9 453 aaPredicted RBP18.92■□□□□ 0.62
LINC00378-201ENST00000413402 CUX1P39880 1505 aa18.9■□□□□ 0.62
LINC00378-201ENST00000413402 SNAPC4Q5SXM2 1469 aa18.87■□□□□ 0.61
LINC00378-201ENST00000413402 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
LINC00378-201ENST00000413402 GRIN2BQ13224 1484 aa18.83■□□□□ 0.6
LINC00378-201ENST00000413402 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
LINC00378-201ENST00000413402 MAGI1Q96QZ7 1491 aaPredicted RBP18.8■□□□□ 0.6
LINC00378-201ENST00000413402 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
LINC00378-201ENST00000413402 SYNJ1O43426 1573 aa18.78■□□□□ 0.6
LINC00378-201ENST00000413402 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.6
LINC00378-201ENST00000413402 SYNJ2O15056 1496 aa18.75■□□□□ 0.59
LINC00378-201ENST00000413402 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
LINC00378-201ENST00000413402 PBRM1Q86U86 1689 aa18.73■□□□□ 0.59
LINC00378-201ENST00000413402 WRNQ14191 1432 aaPredicted RBP eCLIP18.71■□□□□ 0.59
LINC00378-201ENST00000413402 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
LINC00378-201ENST00000413402 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
LINC00378-201ENST00000413402 ABCA5Q8WWZ7 1642 aa18.64■□□□□ 0.57
LINC00378-201ENST00000413402 TOP2BQ02880 1626 aa18.61■□□□□ 0.57
LINC00378-201ENST00000413402 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
LINC00378-201ENST00000413402 GRIN2AQ12879 1464 aa18.57■□□□□ 0.56
LINC00378-201ENST00000413402 FHAD1B1AJZ9 1412 aa18.53■□□□□ 0.56
LINC00378-201ENST00000413402 ADAMTS12P58397 1594 aa18.52■□□□□ 0.56
LINC00378-201ENST00000413402 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
LINC00378-201ENST00000413402 CEP170Q5SW79 1584 aa18.47■□□□□ 0.55
LINC00378-201ENST00000413402 NUP160Q12769 1436 aa18.46■□□□□ 0.55
LINC00378-201ENST00000413402 ERCC6L2Q5T890 1561 aa18.42■□□□□ 0.54
LINC00378-201ENST00000413402 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
LINC00378-201ENST00000413402 PRG4Q92954 1404 aaPredicted RBP18.38■□□□□ 0.53
LINC00378-201ENST00000413402 SHROOM2Q13796 1616 aa18.35■□□□□ 0.53
LINC00378-201ENST00000413402 NPM1P06748 294 aaKnown RBP eCLIP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms