RNA–Protein interactions for RNA: ENST00000413124.2

LINC00424-201, long intergenic non-protein coding RNA 424, humanhuman

TSL 4 BASIC

Gene LINC00424, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00424-201ENST00000413124 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
LINC00424-201ENST00000413124 ABCC9O60706 1549 aa25.94■■□□□ 1.74
LINC00424-201ENST00000413124 CCDC180Q9P1Z9 1646 aa25.42■■□□□ 1.66
LINC00424-201ENST00000413124 DNAJC5BQ9UF47 199 aa25.08■■□□□ 1.61
LINC00424-201ENST00000413124 AEBP2Q6ZN18 517 aaPredicted RBP24.75■■□□□ 1.55
LINC00424-201ENST00000413124 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
LINC00424-201ENST00000413124 NACADO15069 1562 aa24.25■■□□□ 1.47
LINC00424-201ENST00000413124 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
LINC00424-201ENST00000413124 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
LINC00424-201ENST00000413124 MYO15BQ96JP2 1530 aa23.82■■□□□ 1.4
LINC00424-201ENST00000413124 BICRAQ9NZM4 1560 aa23.75■■□□□ 1.39
LINC00424-201ENST00000413124 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
LINC00424-201ENST00000413124 SHROOM4Q9ULL8 1493 aa23.61■■□□□ 1.37
LINC00424-201ENST00000413124 DNAJC5Q9H3Z4 198 aa23.58■■□□□ 1.37
LINC00424-201ENST00000413124 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
LINC00424-201ENST00000413124 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
LINC00424-201ENST00000413124 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
LINC00424-201ENST00000413124 DCAF1Q9Y4B6 1507 aa23.26■■□□□ 1.31
LINC00424-201ENST00000413124 EIF4G1Q04637 1599 aaKnown RBP23.25■■□□□ 1.31
LINC00424-201ENST00000413124 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
LINC00424-201ENST00000413124 SCRIBQ14160 1630 aa23.04■■□□□ 1.28
LINC00424-201ENST00000413124 CUX2O14529 1486 aa22.73■■□□□ 1.23
LINC00424-201ENST00000413124 ERCC6Q03468 1493 aa22.5■■□□□ 1.19
LINC00424-201ENST00000413124 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
LINC00424-201ENST00000413124 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
LINC00424-201ENST00000413124 ATAD2BQ9ULI0 1458 aa22.22■■□□□ 1.15
LINC00424-201ENST00000413124 HMGXB3Q12766 1538 aa22.17■■□□□ 1.14
LINC00424-201ENST00000413124 SMARCA2P51531 1590 aa22.14■■□□□ 1.13
LINC00424-201ENST00000413124 NESP48681 1621 aa22.09■■□□□ 1.13
LINC00424-201ENST00000413124 THOC2Q8NI27 1593 aaKnown RBP22.01■■□□□ 1.11
LINC00424-201ENST00000413124 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
LINC00424-201ENST00000413124 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
LINC00424-201ENST00000413124 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.11
LINC00424-201ENST00000413124 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
LINC00424-201ENST00000413124 PEG3Q9GZU2 1588 aa21.87■■□□□ 1.09
LINC00424-201ENST00000413124 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
LINC00424-201ENST00000413124 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
LINC00424-201ENST00000413124 MRC2Q9UBG0 1479 aa21.7■■□□□ 1.06
LINC00424-201ENST00000413124 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
LINC00424-201ENST00000413124 WDR62O43379 1518 aa21.66■■□□□ 1.06
LINC00424-201ENST00000413124 OSCARQ8IYS5 282 aa21.6■■□□□ 1.05
LINC00424-201ENST00000413124 MROH2BQ7Z745 1585 aa21.59■■□□□ 1.05
LINC00424-201ENST00000413124 CEP164Q9UPV0 1460 aa21.5■■□□□ 1.03
LINC00424-201ENST00000413124 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
LINC00424-201ENST00000413124 CFTRP13569 1480 aa21.33■■□□□ 1.01
LINC00424-201ENST00000413124 URB2Q14146 1524 aaKnown RBP21.23■□□□□ 0.99
LINC00424-201ENST00000413124 RIMBP3CA6NJZ7 1639 aa21.22■□□□□ 0.99
LINC00424-201ENST00000413124 RIMBP3BA6NNM3 1639 aa21.22■□□□□ 0.99
LINC00424-201ENST00000413124 RIMBP3Q9UFD9 1639 aa21.22■□□□□ 0.99
LINC00424-201ENST00000413124 WIZO95785 1651 aa21.21■□□□□ 0.99
LINC00424-201ENST00000413124 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
LINC00424-201ENST00000413124 CYB5RLQ6IPT4 315 aa21.15■□□□□ 0.98
LINC00424-201ENST00000413124 TRHP20396 242 aaPredicted RBP21.14■□□□□ 0.97
LINC00424-201ENST00000413124 IFT140Q96RY7 1462 aa21.12■□□□□ 0.97
LINC00424-201ENST00000413124 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
LINC00424-201ENST00000413124 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
LINC00424-201ENST00000413124 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
LINC00424-201ENST00000413124 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
LINC00424-201ENST00000413124 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
LINC00424-201ENST00000413124 ARAP1Q96P48 1450 aa20.93■□□□□ 0.94
LINC00424-201ENST00000413124 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
LINC00424-201ENST00000413124 EIF4G3O43432 1585 aaKnown RBP20.88■□□□□ 0.93
LINC00424-201ENST00000413124 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
LINC00424-201ENST00000413124 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.92
LINC00424-201ENST00000413124 FBLN2P98095 1184 aa20.79■□□□□ 0.92
LINC00424-201ENST00000413124 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
LINC00424-201ENST00000413124 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
LINC00424-201ENST00000413124 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
LINC00424-201ENST00000413124 TARBP1Q13395 1621 aaKnown RBP20.73■□□□□ 0.91
LINC00424-201ENST00000413124 CHD1O14646 1710 aa20.72■□□□□ 0.91
LINC00424-201ENST00000413124 POLA1P09884 1462 aaPredicted RBP20.68■□□□□ 0.9
LINC00424-201ENST00000413124 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.9
LINC00424-201ENST00000413124 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
LINC00424-201ENST00000413124 SOGA1O94964 1423 aa20.6■□□□□ 0.89
LINC00424-201ENST00000413124 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
LINC00424-201ENST00000413124 SNAPC4Q5SXM2 1469 aa20.59■□□□□ 0.89
LINC00424-201ENST00000413124 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
LINC00424-201ENST00000413124 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
LINC00424-201ENST00000413124 MAGI1Q96QZ7 1491 aaPredicted RBP20.58■□□□□ 0.89
LINC00424-201ENST00000413124 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
LINC00424-201ENST00000413124 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
LINC00424-201ENST00000413124 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
LINC00424-201ENST00000413124 GAPVD1Q14C86 1478 aa20.48■□□□□ 0.87
LINC00424-201ENST00000413124 FGD5Q6ZNL6 1462 aa20.44■□□□□ 0.86
LINC00424-201ENST00000413124 CUX1P39880 1505 aa20.32■□□□□ 0.84
LINC00424-201ENST00000413124 ILDR1Q86SU0 546 aaPredicted RBP20.25■□□□□ 0.83
LINC00424-201ENST00000413124 ABCA10Q8WWZ4 1543 aa20.24■□□□□ 0.83
LINC00424-201ENST00000413124 GRIN2AQ12879 1464 aa20.22■□□□□ 0.83
LINC00424-201ENST00000413124 NUP160Q12769 1436 aa20.2■□□□□ 0.82
LINC00424-201ENST00000413124 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
LINC00424-201ENST00000413124 ABCA5Q8WWZ7 1642 aa20.19■□□□□ 0.82
LINC00424-201ENST00000413124 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
LINC00424-201ENST00000413124 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
LINC00424-201ENST00000413124 SHROOM2Q13796 1616 aa20.1■□□□□ 0.81
LINC00424-201ENST00000413124 KDM4FA0A1W2PPD8 638 aa20.09■□□□□ 0.81
LINC00424-201ENST00000413124 FHAD1B1AJZ9 1412 aa20.09■□□□□ 0.81
LINC00424-201ENST00000413124 ADAMTS12P58397 1594 aa20.08■□□□□ 0.81
LINC00424-201ENST00000413124 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.8
LINC00424-201ENST00000413124 ABCC10Q5T3U5 1492 aa20.05■□□□□ 0.8
LINC00424-201ENST00000413124 FAM69CQ0P6D2 419 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms