RNA–Protein interactions for RNA: ENST00000413099.6

WDR48-202, Transcript of WD repeat domain 48, humanhuman

TSL 2

Gene WDR48, Length 2,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-202ENST00000413099 NISCHQ9Y2I1 1504 aa15.14■□□□□ 0.01
WDR48-202ENST00000413099 AEBP2Q6ZN18 517 aaPredicted RBP13.78□□□□□ -0.2
WDR48-202ENST00000413099 CCDC180Q9P1Z9 1646 aa13.63□□□□□ -0.23
WDR48-202ENST00000413099 CHIC1Q5VXU3 224 aa13.07□□□□□ -0.32
WDR48-202ENST00000413099 ABCC9O60706 1549 aa12.83□□□□□ -0.36
WDR48-202ENST00000413099 MYO15BQ96JP2 1530 aa12.78□□□□□ -0.36
WDR48-202ENST00000413099 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
WDR48-202ENST00000413099 NACADO15069 1562 aa12.72□□□□□ -0.37
WDR48-202ENST00000413099 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
WDR48-202ENST00000413099 ZCCHC6Q5VYS8 1495 aaKnown RBP12.66□□□□□ -0.38
WDR48-202ENST00000413099 SHROOM4Q9ULL8 1493 aa12.37□□□□□ -0.43
WDR48-202ENST00000413099 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
WDR48-202ENST00000413099 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
WDR48-202ENST00000413099 BICRAQ9NZM4 1560 aa12.15□□□□□ -0.47
WDR48-202ENST00000413099 SCRIBQ14160 1630 aa12.14□□□□□ -0.47
WDR48-202ENST00000413099 SENP3Q9H4L4 574 aaPredicted RBP12.05□□□□□ -0.48
WDR48-202ENST00000413099 POTEDQ86YR6 584 aa11.93□□□□□ -0.5
WDR48-202ENST00000413099 PABPN1Q86U42 306 aaKnown RBP eCLIP11.88□□□□□ -0.51
WDR48-202ENST00000413099 EIF4G1Q04637 1599 aaKnown RBP11.85□□□□□ -0.51
WDR48-202ENST00000413099 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
WDR48-202ENST00000413099 SMARCA4P51532 1647 aa11.75□□□□□ -0.53
WDR48-202ENST00000413099 CC2D2AQ9P2K1 1620 aa11.74□□□□□ -0.53
WDR48-202ENST00000413099 PEG3Q9GZU2 1588 aa11.73□□□□□ -0.53
WDR48-202ENST00000413099 PHF23Q9BUL5 403 aaPredicted RBP11.72□□□□□ -0.53
WDR48-202ENST00000413099 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
WDR48-202ENST00000413099 HMGXB3Q12766 1538 aa11.68□□□□□ -0.54
WDR48-202ENST00000413099 NCAPD3P42695 1498 aa11.65□□□□□ -0.54
WDR48-202ENST00000413099 CECR2Q9BXF3 1484 aa11.62□□□□□ -0.55
WDR48-202ENST00000413099 ATAD2BQ9ULI0 1458 aa11.6□□□□□ -0.55
WDR48-202ENST00000413099 MROH2BQ7Z745 1585 aa11.56□□□□□ -0.56
WDR48-202ENST00000413099 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
WDR48-202ENST00000413099 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
WDR48-202ENST00000413099 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
WDR48-202ENST00000413099 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
WDR48-202ENST00000413099 WIZO95785 1651 aa11.45□□□□□ -0.58
WDR48-202ENST00000413099 LAMC3Q9Y6N6 1575 aa11.4□□□□□ -0.59
WDR48-202ENST00000413099 PRDM2Q13029 1718 aa11.36□□□□□ -0.59
WDR48-202ENST00000413099 PDS5BQ9NTI5 1447 aa11.25□□□□□ -0.61
WDR48-202ENST00000413099 CADPSQ9ULU8 1353 aa11.25□□□□□ -0.61
WDR48-202ENST00000413099 CFTRP13569 1480 aa11.24□□□□□ -0.61
WDR48-202ENST00000413099 FOXD1Q16676 465 aa11.23□□□□□ -0.61
WDR48-202ENST00000413099 CCDC88BA6NC98 1476 aa11.21□□□□□ -0.61
WDR48-202ENST00000413099 CUX2O14529 1486 aa11.17□□□□□ -0.62
WDR48-202ENST00000413099 ERCC6Q03468 1493 aa11.16□□□□□ -0.62
WDR48-202ENST00000413099 ABCC8Q09428 1581 aa11.15□□□□□ -0.62
WDR48-202ENST00000413099 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
WDR48-202ENST00000413099 CEP164Q9UPV0 1460 aa11.14□□□□□ -0.63
WDR48-202ENST00000413099 THOC2Q8NI27 1593 aaKnown RBP11.12□□□□□ -0.63
WDR48-202ENST00000413099 FANCD2Q9BXW9 1451 aa11.11□□□□□ -0.63
WDR48-202ENST00000413099 MRC2Q9UBG0 1479 aa11.11□□□□□ -0.63
WDR48-202ENST00000413099 NESP48681 1621 aa11.1□□□□□ -0.63
WDR48-202ENST00000413099 WDR62O43379 1518 aa11.1□□□□□ -0.63
WDR48-202ENST00000413099 WDR97A6NE52 1622 aa11.05□□□□□ -0.64
WDR48-202ENST00000413099 SUPT5HO00267 1087 aaKnown RBP11.04□□□□□ -0.64
WDR48-202ENST00000413099 DNMBPQ6XZF7 1577 aa11.04□□□□□ -0.64
WDR48-202ENST00000413099 BIVM-ERCC5R4GMW8 1640 aa10.96□□□□□ -0.66
WDR48-202ENST00000413099 URB2Q14146 1524 aaKnown RBP10.95□□□□□ -0.66
WDR48-202ENST00000413099 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
WDR48-202ENST00000413099 MSH5O43196 834 aa10.95□□□□□ -0.66
WDR48-202ENST00000413099 IFT140Q96RY7 1462 aa10.94□□□□□ -0.66
WDR48-202ENST00000413099 TOP2BQ02880 1626 aa10.92□□□□□ -0.66
WDR48-202ENST00000413099 WRNQ14191 1432 aaPredicted RBP eCLIP10.87□□□□□ -0.671e-7■■■■■ 66.8
WDR48-202ENST00000413099 CUX1P39880 1505 aa10.87□□□□□ -0.67
WDR48-202ENST00000413099 TARBP1Q13395 1621 aaKnown RBP10.86□□□□□ -0.67
WDR48-202ENST00000413099 POLA1P09884 1462 aaPredicted RBP10.84□□□□□ -0.67
WDR48-202ENST00000413099 FGD5Q6ZNL6 1462 aa10.83□□□□□ -0.68
WDR48-202ENST00000413099 ABCA10Q8WWZ4 1543 aa10.82□□□□□ -0.68
WDR48-202ENST00000413099 SYNJ1O43426 1573 aa10.8□□□□□ -0.68
WDR48-202ENST00000413099 SOGA1O94964 1423 aa10.79□□□□□ -0.68
WDR48-202ENST00000413099 EIF4G3O43432 1585 aaKnown RBP10.78□□□□□ -0.68
WDR48-202ENST00000413099 ABCA5Q8WWZ7 1642 aa10.78□□□□□ -0.68
WDR48-202ENST00000413099 PBRM1Q86U86 1689 aa10.76□□□□□ -0.69
WDR48-202ENST00000413099 MAGI1Q96QZ7 1491 aaPredicted RBP10.75□□□□□ -0.69
WDR48-202ENST00000413099 ERICH3Q5RHP9 1530 aa10.74□□□□□ -0.69
WDR48-202ENST00000413099 GRIN2BQ13224 1484 aa10.73□□□□□ -0.69
WDR48-202ENST00000413099 CUL7Q14999 1698 aa10.72□□□□□ -0.69
WDR48-202ENST00000413099 GAPVD1Q14C86 1478 aa10.7□□□□□ -0.7
WDR48-202ENST00000413099 EEA1Q15075 1411 aa10.68□□□□□ -0.7
WDR48-202ENST00000413099 KIF27Q86VH2 1401 aa10.68□□□□□ -0.7
WDR48-202ENST00000413099 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
WDR48-202ENST00000413099 ZNF608Q9ULD9 1512 aaPredicted RBP10.66□□□□□ -0.7
WDR48-202ENST00000413099 SYNJ2O15056 1496 aa10.65□□□□□ -0.7
WDR48-202ENST00000413099 ADAMTS12P58397 1594 aa10.65□□□□□ -0.7
WDR48-202ENST00000413099 FHAD1B1AJZ9 1412 aa10.63□□□□□ -0.71
WDR48-202ENST00000413099 CHD1O14646 1710 aa10.63□□□□□ -0.71
WDR48-202ENST00000413099 SNAPC4Q5SXM2 1469 aa10.62□□□□□ -0.71
WDR48-202ENST00000413099 AQRO60306 1485 aaKnown RBP eCLIP10.61□□□□□ -0.715e-9■■■■■ 36.2
WDR48-202ENST00000413099 TDRD9Q8NDG6 1382 aaKnown RBP10.59□□□□□ -0.71
WDR48-202ENST00000413099 TRIM41Q8WV44 630 aa10.58□□□□□ -0.72
WDR48-202ENST00000413099 GRIN2AQ12879 1464 aa10.57□□□□□ -0.72
WDR48-202ENST00000413099 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
WDR48-202ENST00000413099 OSCARQ8IYS5 282 aa10.55□□□□□ -0.72
WDR48-202ENST00000413099 NUP160Q12769 1436 aa10.54□□□□□ -0.72
WDR48-202ENST00000413099 IGF1RP08069 1367 aa10.52□□□□□ -0.73
WDR48-202ENST00000413099 CHMP7Q8WUX9 453 aaPredicted RBP10.51□□□□□ -0.73
WDR48-202ENST00000413099 SHROOM2Q13796 1616 aa10.51□□□□□ -0.73
WDR48-202ENST00000413099 KIF21BO75037 1637 aa10.51□□□□□ -0.73
WDR48-202ENST00000413099 RAPGEF2Q9Y4G8 1499 aa10.5□□□□□ -0.73
WDR48-202ENST00000413099 CTTNBP2Q8WZ74 1663 aa10.5□□□□□ -0.73
WDR48-202ENST00000413099 CARMIL1Q5VZK9 1371 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms