RNA–Protein interactions for RNA: ENST00000412894.5

FAM3A-206, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 832 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-206ENST00000412894 NISCHQ9Y2I1 1504 aa38.08■■■■□ 3.69
FAM3A-206ENST00000412894 CCDC180Q9P1Z9 1646 aa33.92■■■■□ 3.02
FAM3A-206ENST00000412894 ABCC9O60706 1549 aa33.09■■■□□ 2.89
FAM3A-206ENST00000412894 RB1CC1Q8TDY2 1594 aa31.86■■■□□ 2.69
FAM3A-206ENST00000412894 NACADO15069 1562 aa31.81■■■□□ 2.68
FAM3A-206ENST00000412894 DCAF8L2P0C7V8 631 aa31.8■■■□□ 2.68
FAM3A-206ENST00000412894 ZCCHC6Q5VYS8 1495 aaKnown RBP31.74■■■□□ 2.67
FAM3A-206ENST00000412894 MYO15BQ96JP2 1530 aa31.59■■■□□ 2.65
FAM3A-206ENST00000412894 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
FAM3A-206ENST00000412894 UNC13AQ9UPW8 1703 aa31.26■■■□□ 2.59
FAM3A-206ENST00000412894 SCRIBQ14160 1630 aa30.95■■■□□ 2.55
FAM3A-206ENST00000412894 BICRAQ9NZM4 1560 aa30.9■■■□□ 2.54
FAM3A-206ENST00000412894 PABPN1Q86U42 306 aaKnown RBP eCLIP30.89■■■□□ 2.54
FAM3A-206ENST00000412894 SHROOM4Q9ULL8 1493 aa30.53■■■□□ 2.48
FAM3A-206ENST00000412894 DNAJC5BQ9UF47 199 aa30.26■■■□□ 2.43
FAM3A-206ENST00000412894 EIF4G1Q04637 1599 aaKnown RBP30.07■■■□□ 2.4
FAM3A-206ENST00000412894 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
FAM3A-206ENST00000412894 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
FAM3A-206ENST00000412894 SMARCA4P51532 1647 aa29.59■■■□□ 2.33
FAM3A-206ENST00000412894 BAZ1AQ9NRL2 1556 aaPredicted RBP29.53■■■□□ 2.32
FAM3A-206ENST00000412894 MROH2BQ7Z745 1585 aa29.37■■■□□ 2.29
FAM3A-206ENST00000412894 SMARCA2P51531 1590 aa29.36■■■□□ 2.29
FAM3A-206ENST00000412894 ATAD2BQ9ULI0 1458 aa29.36■■■□□ 2.29
FAM3A-206ENST00000412894 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
FAM3A-206ENST00000412894 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.27
FAM3A-206ENST00000412894 HMGXB3Q12766 1538 aa29.23■■■□□ 2.27
FAM3A-206ENST00000412894 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
FAM3A-206ENST00000412894 WIZO95785 1651 aa29.11■■■□□ 2.25
FAM3A-206ENST00000412894 RSF1Q96T23 1441 aaPredicted RBP29.01■■■□□ 2.23
FAM3A-206ENST00000412894 TOP2AP11388 1531 aaKnown RBP28.76■■■□□ 2.19
FAM3A-206ENST00000412894 NESP48681 1621 aa28.65■■■□□ 2.18
FAM3A-206ENST00000412894 LAMC3Q9Y6N6 1575 aa28.59■■■□□ 2.17
FAM3A-206ENST00000412894 ERCC6Q03468 1493 aa28.53■■■□□ 2.16
FAM3A-206ENST00000412894 CADPSQ9ULU8 1353 aa28.46■■■□□ 2.15
FAM3A-206ENST00000412894 KIF21AQ7Z4S6 1674 aa28.4■■■□□ 2.14
FAM3A-206ENST00000412894 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
FAM3A-206ENST00000412894 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
FAM3A-206ENST00000412894 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
FAM3A-206ENST00000412894 CFTRP13569 1480 aa28.32■■■□□ 2.12
FAM3A-206ENST00000412894 PRDM2Q13029 1718 aa28.28■■■□□ 2.12
FAM3A-206ENST00000412894 THOC2Q8NI27 1593 aaKnown RBP28.24■■■□□ 2.11
FAM3A-206ENST00000412894 CUX2O14529 1486 aa28.18■■■□□ 2.1
FAM3A-206ENST00000412894 FANCD2Q9BXW9 1451 aa28.17■■■□□ 2.1
FAM3A-206ENST00000412894 CEP164Q9UPV0 1460 aa28.15■■■□□ 2.1
FAM3A-206ENST00000412894 MRC2Q9UBG0 1479 aa28.09■■■□□ 2.09
FAM3A-206ENST00000412894 WDR62O43379 1518 aa28■■■□□ 2.07
FAM3A-206ENST00000412894 URB2Q14146 1524 aaKnown RBP27.9■■■□□ 2.06
FAM3A-206ENST00000412894 TOPBP1Q92547 1522 aa27.74■■■□□ 2.03
FAM3A-206ENST00000412894 DNMBPQ6XZF7 1577 aa27.73■■■□□ 2.03
FAM3A-206ENST00000412894 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
FAM3A-206ENST00000412894 CUX1P39880 1505 aa27.56■■■□□ 2
FAM3A-206ENST00000412894 IFT140Q96RY7 1462 aa27.53■■■□□ 2
FAM3A-206ENST00000412894 POLA1P09884 1462 aaPredicted RBP27.5■■□□□ 1.99
FAM3A-206ENST00000412894 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.99
FAM3A-206ENST00000412894 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.99
FAM3A-206ENST00000412894 ZNF608Q9ULD9 1512 aaPredicted RBP27.41■■□□□ 1.98
FAM3A-206ENST00000412894 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
FAM3A-206ENST00000412894 EIF4G3O43432 1585 aaKnown RBP27.37■■□□□ 1.97
FAM3A-206ENST00000412894 SOGA1O94964 1423 aa27.37■■□□□ 1.97
FAM3A-206ENST00000412894 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.97
FAM3A-206ENST00000412894 BIVM-ERCC5R4GMW8 1640 aa27.37■■□□□ 1.97
FAM3A-206ENST00000412894 SYNJ1O43426 1573 aa27.35■■□□□ 1.97
FAM3A-206ENST00000412894 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
FAM3A-206ENST00000412894 WDR97A6NE52 1622 aa27.3■■□□□ 1.96
FAM3A-206ENST00000412894 AQRO60306 1485 aaKnown RBP eCLIP27.26■■□□□ 1.954e-7■■■□□ 17.4
FAM3A-206ENST00000412894 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
FAM3A-206ENST00000412894 DNAJC5Q9H3Z4 198 aa27.21■■□□□ 1.95
FAM3A-206ENST00000412894 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
FAM3A-206ENST00000412894 PBRM1Q86U86 1689 aa27.12■■□□□ 1.93
FAM3A-206ENST00000412894 ABCA5Q8WWZ7 1642 aa27.11■■□□□ 1.93
FAM3A-206ENST00000412894 GAPVD1Q14C86 1478 aa27.07■■□□□ 1.92
FAM3A-206ENST00000412894 CHD1O14646 1710 aa27.07■■□□□ 1.92
FAM3A-206ENST00000412894 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
FAM3A-206ENST00000412894 SNAPC4Q5SXM2 1469 aa27.04■■□□□ 1.92
FAM3A-206ENST00000412894 MAGI1Q96QZ7 1491 aaPredicted RBP26.99■■□□□ 1.91
FAM3A-206ENST00000412894 OSCARQ8IYS5 282 aa26.98■■□□□ 1.91
FAM3A-206ENST00000412894 FBLN2P98095 1184 aa26.93■■□□□ 1.9
FAM3A-206ENST00000412894 SYNJ2O15056 1496 aa26.87■■□□□ 1.89
FAM3A-206ENST00000412894 ERICH3Q5RHP9 1530 aa26.86■■□□□ 1.89
FAM3A-206ENST00000412894 ADAMTS12P58397 1594 aa26.85■■□□□ 1.89
FAM3A-206ENST00000412894 CHMP7Q8WUX9 453 aaPredicted RBP26.84■■□□□ 1.89
FAM3A-206ENST00000412894 KIF27Q86VH2 1401 aa26.79■■□□□ 1.88
FAM3A-206ENST00000412894 FHAD1B1AJZ9 1412 aa26.74■■□□□ 1.87
FAM3A-206ENST00000412894 TRIM41Q8WV44 630 aa26.74■■□□□ 1.87
FAM3A-206ENST00000412894 GRIN2AQ12879 1464 aa26.72■■□□□ 1.87
FAM3A-206ENST00000412894 CLASP1Q7Z460 1538 aa26.69■■□□□ 1.86
FAM3A-206ENST00000412894 CUL7Q14999 1698 aa26.67■■□□□ 1.86
FAM3A-206ENST00000412894 RIMBP3CA6NJZ7 1639 aa26.65■■□□□ 1.86
FAM3A-206ENST00000412894 RIMBP3BA6NNM3 1639 aa26.65■■□□□ 1.86
FAM3A-206ENST00000412894 RIMBP3Q9UFD9 1639 aa26.65■■□□□ 1.86
FAM3A-206ENST00000412894 IGF1RP08069 1367 aa26.64■■□□□ 1.86
FAM3A-206ENST00000412894 CEP170Q5SW79 1584 aa26.62■■□□□ 1.85
FAM3A-206ENST00000412894 ARHGEF11O15085 1522 aa26.6■■□□□ 1.85
FAM3A-206ENST00000412894 RUSC2Q8N2Y8 1516 aa26.59■■□□□ 1.85
FAM3A-206ENST00000412894 NUP160Q12769 1436 aa26.57■■□□□ 1.84
FAM3A-206ENST00000412894 CARMIL1Q5VZK9 1371 aa26.51■■□□□ 1.83
FAM3A-206ENST00000412894 CHIC1Q5VXU3 224 aa26.44■■□□□ 1.82
FAM3A-206ENST00000412894 SHROOM2Q13796 1616 aa26.43■■□□□ 1.82
FAM3A-206ENST00000412894 ARAP1Q96P48 1450 aa26.4■■□□□ 1.82
FAM3A-206ENST00000412894 RAPGEF2Q9Y4G8 1499 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms