RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 NISCHQ9Y2I1 1504 aa34.72■■■■□ 3.15
RAB11FIP3-202ENST00000412256 ABCC9O60706 1549 aa31.34■■■□□ 2.61
RAB11FIP3-202ENST00000412256 CCDC180Q9P1Z9 1646 aa31.05■■■□□ 2.56
RAB11FIP3-202ENST00000412256 RB1CC1Q8TDY2 1594 aa29.7■■■□□ 2.35
RAB11FIP3-202ENST00000412256 DCAF8L2P0C7V8 631 aa29.65■■■□□ 2.34
RAB11FIP3-202ENST00000412256 DNAJC5BQ9UF47 199 aa29.53■■■□□ 2.32
RAB11FIP3-202ENST00000412256 NACADO15069 1562 aa29.47■■■□□ 2.31
RAB11FIP3-202ENST00000412256 PABPN1Q86U42 306 aaKnown RBP eCLIP29.28■■■□□ 2.28
RAB11FIP3-202ENST00000412256 MYO15BQ96JP2 1530 aa28.99■■■□□ 2.23
RAB11FIP3-202ENST00000412256 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
RAB11FIP3-202ENST00000412256 BICRAQ9NZM4 1560 aa28.8■■■□□ 2.2
RAB11FIP3-202ENST00000412256 ZCCHC6Q5VYS8 1495 aaKnown RBP28.72■■■□□ 2.19
RAB11FIP3-202ENST00000412256 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
RAB11FIP3-202ENST00000412256 SCRIBQ14160 1630 aa28.42■■■□□ 2.14
RAB11FIP3-202ENST00000412256 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
RAB11FIP3-202ENST00000412256 CECR2Q9BXF3 1484 aa28.22■■■□□ 2.11
RAB11FIP3-202ENST00000412256 CC2D2AQ9P2K1 1620 aa28.21■■■□□ 2.11
RAB11FIP3-202ENST00000412256 EIF4G1Q04637 1599 aaKnown RBP28.13■■■□□ 2.09
RAB11FIP3-202ENST00000412256 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
RAB11FIP3-202ENST00000412256 ATAD2BQ9ULI0 1458 aa27.17■■□□□ 1.94
RAB11FIP3-202ENST00000412256 DNAJC5Q9H3Z4 198 aa27.16■■□□□ 1.94
RAB11FIP3-202ENST00000412256 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
RAB11FIP3-202ENST00000412256 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
RAB11FIP3-202ENST00000412256 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
RAB11FIP3-202ENST00000412256 HMGXB3Q12766 1538 aa26.96■■□□□ 1.91
RAB11FIP3-202ENST00000412256 CUX2O14529 1486 aa26.95■■□□□ 1.91
RAB11FIP3-202ENST00000412256 BAZ1AQ9NRL2 1556 aaPredicted RBP26.94■■□□□ 1.9
RAB11FIP3-202ENST00000412256 BAZ1BQ9UIG0 1483 aaKnown RBP26.91■■□□□ 1.9
RAB11FIP3-202ENST00000412256 NESP48681 1621 aa26.88■■□□□ 1.89
RAB11FIP3-202ENST00000412256 MROH2BQ7Z745 1585 aa26.77■■□□□ 1.88
RAB11FIP3-202ENST00000412256 PEG3Q9GZU2 1588 aa26.75■■□□□ 1.87
RAB11FIP3-202ENST00000412256 LAMC3Q9Y6N6 1575 aa26.59■■□□□ 1.85
RAB11FIP3-202ENST00000412256 PDS5BQ9NTI5 1447 aa26.55■■□□□ 1.84
RAB11FIP3-202ENST00000412256 CADPSQ9ULU8 1353 aa26.48■■□□□ 1.83
RAB11FIP3-202ENST00000412256 THOC2Q8NI27 1593 aaKnown RBP26.48■■□□□ 1.83
RAB11FIP3-202ENST00000412256 WIZO95785 1651 aa26.42■■□□□ 1.82
RAB11FIP3-202ENST00000412256 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
RAB11FIP3-202ENST00000412256 MRC2Q9UBG0 1479 aa26.27■■□□□ 1.8
RAB11FIP3-202ENST00000412256 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
RAB11FIP3-202ENST00000412256 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
RAB11FIP3-202ENST00000412256 FANCD2Q9BXW9 1451 aa26.15■■□□□ 1.78
RAB11FIP3-202ENST00000412256 WDR62O43379 1518 aa26.14■■□□□ 1.78
RAB11FIP3-202ENST00000412256 CFTRP13569 1480 aa26.11■■□□□ 1.77
RAB11FIP3-202ENST00000412256 TOP2AP11388 1531 aaKnown RBP26.06■■□□□ 1.76
RAB11FIP3-202ENST00000412256 TRIM41Q8WV44 630 aa26.03■■□□□ 1.76
RAB11FIP3-202ENST00000412256 URB2Q14146 1524 aaKnown RBP25.91■■□□□ 1.74
RAB11FIP3-202ENST00000412256 OSCARQ8IYS5 282 aa25.89■■□□□ 1.74
RAB11FIP3-202ENST00000412256 CCDC88BA6NC98 1476 aa25.85■■□□□ 1.73
RAB11FIP3-202ENST00000412256 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
RAB11FIP3-202ENST00000412256 IFT140Q96RY7 1462 aa25.65■■□□□ 1.7
RAB11FIP3-202ENST00000412256 ZNF608Q9ULD9 1512 aaPredicted RBP25.63■■□□□ 1.69
RAB11FIP3-202ENST00000412256 TOPBP1Q92547 1522 aa25.62■■□□□ 1.69
RAB11FIP3-202ENST00000412256 ABCC8Q09428 1581 aa25.57■■□□□ 1.68
RAB11FIP3-202ENST00000412256 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
RAB11FIP3-202ENST00000412256 AQRO60306 1485 aaKnown RBP eCLIP25.45■■□□□ 1.66
RAB11FIP3-202ENST00000412256 FBLN2P98095 1184 aa25.43■■□□□ 1.66
RAB11FIP3-202ENST00000412256 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.65
RAB11FIP3-202ENST00000412256 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
RAB11FIP3-202ENST00000412256 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
RAB11FIP3-202ENST00000412256 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
RAB11FIP3-202ENST00000412256 POLA1P09884 1462 aaPredicted RBP25.35■■□□□ 1.65
RAB11FIP3-202ENST00000412256 TARBP1Q13395 1621 aaKnown RBP25.34■■□□□ 1.65
RAB11FIP3-202ENST00000412256 SOGA1O94964 1423 aa25.33■■□□□ 1.65
RAB11FIP3-202ENST00000412256 CYB5RLQ6IPT4 315 aa25.33■■□□□ 1.65
RAB11FIP3-202ENST00000412256 RAD54L2Q9Y4B4 1467 aa25.32■■□□□ 1.64
RAB11FIP3-202ENST00000412256 ARHGEF11O15085 1522 aa25.32■■□□□ 1.64
RAB11FIP3-202ENST00000412256 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
RAB11FIP3-202ENST00000412256 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
RAB11FIP3-202ENST00000412256 FGD5Q6ZNL6 1462 aa25.2■■□□□ 1.62
RAB11FIP3-202ENST00000412256 CHD1O14646 1710 aa25.2■■□□□ 1.62
RAB11FIP3-202ENST00000412256 CHMP7Q8WUX9 453 aaPredicted RBP25.19■■□□□ 1.62
RAB11FIP3-202ENST00000412256 CUX1P39880 1505 aa25.14■■□□□ 1.62
RAB11FIP3-202ENST00000412256 SNAPC4Q5SXM2 1469 aa25.12■■□□□ 1.61
RAB11FIP3-202ENST00000412256 TRHP20396 242 aaPredicted RBP25.1■■□□□ 1.61
RAB11FIP3-202ENST00000412256 ARAP1Q96P48 1450 aa25.07■■□□□ 1.6
RAB11FIP3-202ENST00000412256 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
RAB11FIP3-202ENST00000412256 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
RAB11FIP3-202ENST00000412256 WDR97A6NE52 1622 aa25.01■■□□□ 1.59
RAB11FIP3-202ENST00000412256 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
RAB11FIP3-202ENST00000412256 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
RAB11FIP3-202ENST00000412256 SYNJ1O43426 1573 aa24.95■■□□□ 1.58
RAB11FIP3-202ENST00000412256 CLASP1Q7Z460 1538 aa24.92■■□□□ 1.58
RAB11FIP3-202ENST00000412256 ABCA10Q8WWZ4 1543 aa24.88■■□□□ 1.57
RAB11FIP3-202ENST00000412256 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
RAB11FIP3-202ENST00000412256 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
RAB11FIP3-202ENST00000412256 ABCA5Q8WWZ7 1642 aa24.78■■□□□ 1.56
RAB11FIP3-202ENST00000412256 GRIN2AQ12879 1464 aa24.7■■□□□ 1.55
RAB11FIP3-202ENST00000412256 TOP2BQ02880 1626 aa24.68■■□□□ 1.54
RAB11FIP3-202ENST00000412256 FHAD1B1AJZ9 1412 aa24.65■■□□□ 1.54
RAB11FIP3-202ENST00000412256 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.53
RAB11FIP3-202ENST00000412256 NUP160Q12769 1436 aa24.61■■□□□ 1.53
RAB11FIP3-202ENST00000412256 ADAMTS12P58397 1594 aa24.61■■□□□ 1.53
RAB11FIP3-202ENST00000412256 ERCC6L2Q5T890 1561 aa24.59■■□□□ 1.53
RAB11FIP3-202ENST00000412256 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
RAB11FIP3-202ENST00000412256 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
RAB11FIP3-202ENST00000412256 JPH4Q96JJ6 628 aa24.52■■□□□ 1.52
RAB11FIP3-202ENST00000412256 PRG4Q92954 1404 aaPredicted RBP24.47■■□□□ 1.51
RAB11FIP3-202ENST00000412256 SHROOM2Q13796 1616 aa24.43■■□□□ 1.5
RAB11FIP3-202ENST00000412256 AEBP2Q6ZN18 517 aaPredicted RBP24.42■■□□□ 1.5
RAB11FIP3-202ENST00000412256 NPM1P06748 294 aaKnown RBP eCLIP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms