RNA–Protein interactions for RNA: ENST00000412114.2

FAM238A-201, Transcript of family with sequence similarity 238 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM238A, Length 1,091 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238A-201ENST00000412114 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.23
FAM238A-201ENST00000412114 CCDC180Q9P1Z9 1646 aa25.82■■□□□ 1.72
FAM238A-201ENST00000412114 ABCC9O60706 1549 aa25.38■■□□□ 1.65
FAM238A-201ENST00000412114 RB1CC1Q8TDY2 1594 aa24.36■■□□□ 1.49
FAM238A-201ENST00000412114 NACADO15069 1562 aa24.3■■□□□ 1.48
FAM238A-201ENST00000412114 DCAF8L2P0C7V8 631 aa24.22■■□□□ 1.47
FAM238A-201ENST00000412114 MYO15BQ96JP2 1530 aa24.12■■□□□ 1.45
FAM238A-201ENST00000412114 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
FAM238A-201ENST00000412114 DCAF1Q9Y4B6 1507 aa23.95■■□□□ 1.43
FAM238A-201ENST00000412114 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
FAM238A-201ENST00000412114 PABPN1Q86U42 306 aaKnown RBP eCLIP23.7■■□□□ 1.38
FAM238A-201ENST00000412114 BICRAQ9NZM4 1560 aa23.66■■□□□ 1.38
FAM238A-201ENST00000412114 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
FAM238A-201ENST00000412114 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
FAM238A-201ENST00000412114 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
FAM238A-201ENST00000412114 EIF4G1Q04637 1599 aaKnown RBP23.02■■□□□ 1.28
FAM238A-201ENST00000412114 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
FAM238A-201ENST00000412114 CECR2Q9BXF3 1484 aa22.82■■□□□ 1.24
FAM238A-201ENST00000412114 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
FAM238A-201ENST00000412114 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
FAM238A-201ENST00000412114 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
FAM238A-201ENST00000412114 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
FAM238A-201ENST00000412114 SMARCA2P51531 1590 aa22.37■■□□□ 1.17
FAM238A-201ENST00000412114 MROH2BQ7Z745 1585 aa22.31■■□□□ 1.16
FAM238A-201ENST00000412114 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
FAM238A-201ENST00000412114 HMGXB3Q12766 1538 aa22.29■■□□□ 1.16
FAM238A-201ENST00000412114 BAZ1BQ9UIG0 1483 aaKnown RBP22.2■■□□□ 1.14
FAM238A-201ENST00000412114 WIZO95785 1651 aa22.07■■□□□ 1.12
FAM238A-201ENST00000412114 RSF1Q96T23 1441 aaPredicted RBP21.99■■□□□ 1.11
FAM238A-201ENST00000412114 NESP48681 1621 aa21.93■■□□□ 1.1
FAM238A-201ENST00000412114 ERCC6Q03468 1493 aa21.87■■□□□ 1.09
FAM238A-201ENST00000412114 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
FAM238A-201ENST00000412114 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
FAM238A-201ENST00000412114 CADPSQ9ULU8 1353 aa21.75■■□□□ 1.07
FAM238A-201ENST00000412114 CUX2O14529 1486 aa21.72■■□□□ 1.07
FAM238A-201ENST00000412114 PDS5BQ9NTI5 1447 aa21.7■■□□□ 1.06
FAM238A-201ENST00000412114 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
FAM238A-201ENST00000412114 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
FAM238A-201ENST00000412114 CFTRP13569 1480 aa21.59■■□□□ 1.05
FAM238A-201ENST00000412114 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
FAM238A-201ENST00000412114 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
FAM238A-201ENST00000412114 MRC2Q9UBG0 1479 aa21.49■■□□□ 1.03
FAM238A-201ENST00000412114 CEP164Q9UPV0 1460 aa21.47■■□□□ 1.03
FAM238A-201ENST00000412114 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
FAM238A-201ENST00000412114 WDR62O43379 1518 aa21.44■■□□□ 1.02
FAM238A-201ENST00000412114 URB2Q14146 1524 aaKnown RBP21.31■■□□□ 1
FAM238A-201ENST00000412114 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
FAM238A-201ENST00000412114 DNAJC5Q9H3Z4 198 aa21.27■■□□□ 1
FAM238A-201ENST00000412114 TOPBP1Q92547 1522 aa21.14■□□□□ 0.98
FAM238A-201ENST00000412114 ABCC8Q09428 1581 aa21.14■□□□□ 0.97
FAM238A-201ENST00000412114 DNMBPQ6XZF7 1577 aa21.11■□□□□ 0.97
FAM238A-201ENST00000412114 IFT140Q96RY7 1462 aa21.05■□□□□ 0.96
FAM238A-201ENST00000412114 ZNF608Q9ULD9 1512 aaPredicted RBP20.97■□□□□ 0.95
FAM238A-201ENST00000412114 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
FAM238A-201ENST00000412114 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
FAM238A-201ENST00000412114 CUX1P39880 1505 aa20.93■□□□□ 0.94
FAM238A-201ENST00000412114 EIF4G3O43432 1585 aaKnown RBP20.88■□□□□ 0.93
FAM238A-201ENST00000412114 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
FAM238A-201ENST00000412114 SOGA1O94964 1423 aa20.87■□□□□ 0.93
FAM238A-201ENST00000412114 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
FAM238A-201ENST00000412114 AQRO60306 1485 aaKnown RBP eCLIP20.83■□□□□ 0.93
FAM238A-201ENST00000412114 OSCARQ8IYS5 282 aa20.8■□□□□ 0.92
FAM238A-201ENST00000412114 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
FAM238A-201ENST00000412114 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
FAM238A-201ENST00000412114 BIVM-ERCC5R4GMW8 1640 aa20.73■□□□□ 0.91
FAM238A-201ENST00000412114 WRNQ14191 1432 aaPredicted RBP eCLIP20.72■□□□□ 0.91
FAM238A-201ENST00000412114 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
FAM238A-201ENST00000412114 SYNJ1O43426 1573 aa20.7■□□□□ 0.9
FAM238A-201ENST00000412114 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
FAM238A-201ENST00000412114 CHD1O14646 1710 aa20.67■□□□□ 0.9
FAM238A-201ENST00000412114 GRIN2BQ13224 1484 aa20.63■□□□□ 0.89
FAM238A-201ENST00000412114 SNAPC4Q5SXM2 1469 aa20.62■□□□□ 0.89
FAM238A-201ENST00000412114 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
FAM238A-201ENST00000412114 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
FAM238A-201ENST00000412114 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
FAM238A-201ENST00000412114 MAGI1Q96QZ7 1491 aaPredicted RBP20.6■□□□□ 0.89
FAM238A-201ENST00000412114 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
FAM238A-201ENST00000412114 FBLN2P98095 1184 aa20.58■□□□□ 0.89
FAM238A-201ENST00000412114 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
FAM238A-201ENST00000412114 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
FAM238A-201ENST00000412114 RIMBP3CA6NJZ7 1639 aa20.5■□□□□ 0.87
FAM238A-201ENST00000412114 RIMBP3BA6NNM3 1639 aa20.5■□□□□ 0.87
FAM238A-201ENST00000412114 RIMBP3Q9UFD9 1639 aa20.5■□□□□ 0.87
FAM238A-201ENST00000412114 ARHGEF11O15085 1522 aa20.45■□□□□ 0.86
FAM238A-201ENST00000412114 TRIM41Q8WV44 630 aa20.45■□□□□ 0.86
FAM238A-201ENST00000412114 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
FAM238A-201ENST00000412114 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
FAM238A-201ENST00000412114 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
FAM238A-201ENST00000412114 ADAMTS12P58397 1594 aa20.41■□□□□ 0.86
FAM238A-201ENST00000412114 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
FAM238A-201ENST00000412114 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
FAM238A-201ENST00000412114 KIF27Q86VH2 1401 aa20.3■□□□□ 0.84
FAM238A-201ENST00000412114 NUP160Q12769 1436 aa20.29■□□□□ 0.84
FAM238A-201ENST00000412114 ARAP1Q96P48 1450 aa20.29■□□□□ 0.84
FAM238A-201ENST00000412114 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
FAM238A-201ENST00000412114 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
FAM238A-201ENST00000412114 IGF1RP08069 1367 aa20.27■□□□□ 0.84
FAM238A-201ENST00000412114 CUL7Q14999 1698 aa20.21■□□□□ 0.83
FAM238A-201ENST00000412114 SHROOM2Q13796 1616 aa20.18■□□□□ 0.82
FAM238A-201ENST00000412114 ERCC6L2Q5T890 1561 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms