RNA–Protein interactions for RNA: ENST00000412011.5

ITSN2-205, Transcript of intersectin 2, humanhuman

TSL 1 (best)

Gene ITSN2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-205ENST00000412011 NISCHQ9Y2I1 1504 aa45.72■■■■■ 4.91
ITSN2-205ENST00000412011 CCDC180Q9P1Z9 1646 aa39.63■■■■□ 3.93
ITSN2-205ENST00000412011 ZCCHC6Q5VYS8 1495 aaKnown RBP38.49■■■■□ 3.75
ITSN2-205ENST00000412011 DCAF1Q9Y4B6 1507 aa37.74■■■■□ 3.63
ITSN2-205ENST00000412011 SHROOM4Q9ULL8 1493 aa37.72■■■■□ 3.63
ITSN2-205ENST00000412011 DCAF8L2P0C7V8 631 aa37.68■■■■□ 3.62
ITSN2-205ENST00000412011 ABCC9O60706 1549 aa37.15■■■■□ 3.54
ITSN2-205ENST00000412011 MYO15BQ96JP2 1530 aa37.1■■■■□ 3.53
ITSN2-205ENST00000412011 NACADO15069 1562 aa36.78■■■■□ 3.48
ITSN2-205ENST00000412011 SCRIBQ14160 1630 aa36.6■■■■□ 3.45
ITSN2-205ENST00000412011 SUPT5HO00267 1087 aaKnown RBP36.49■■■■□ 3.43
ITSN2-205ENST00000412011 RB1CC1Q8TDY2 1594 aa36.38■■■■□ 3.41
ITSN2-205ENST00000412011 UNC13AQ9UPW8 1703 aa35.81■■■■□ 3.32
ITSN2-205ENST00000412011 RSF1Q96T23 1441 aaPredicted RBP35.66■■■■□ 3.3
ITSN2-205ENST00000412011 CECR2Q9BXF3 1484 aa35.55■■■■□ 3.28
ITSN2-205ENST00000412011 MROH2BQ7Z745 1585 aa35.39■■■■□ 3.26
ITSN2-205ENST00000412011 BICRAQ9NZM4 1560 aa35.35■■■■□ 3.25
ITSN2-205ENST00000412011 BAZ1AQ9NRL2 1556 aaPredicted RBP35.24■■■■□ 3.23
ITSN2-205ENST00000412011 WIZO95785 1651 aa35.16■■■■□ 3.22
ITSN2-205ENST00000412011 CHIC1Q5VXU3 224 aa35.15■■■■□ 3.22
ITSN2-205ENST00000412011 PABPN1Q86U42 306 aaKnown RBP eCLIP35.15■■■■□ 3.22
ITSN2-205ENST00000412011 SMARCA4P51532 1647 aa35.07■■■■□ 3.21
ITSN2-205ENST00000412011 TOP2AP11388 1531 aaKnown RBP34.72■■■■□ 3.15
ITSN2-205ENST00000412011 PEG3Q9GZU2 1588 aa34.58■■■■□ 3.13
ITSN2-205ENST00000412011 SMARCA2P51531 1590 aa34.45■■■■□ 3.11
ITSN2-205ENST00000412011 CCDC88BA6NC98 1476 aa34.41■■■■□ 3.1
ITSN2-205ENST00000412011 EIF4G1Q04637 1599 aaKnown RBP34.37■■■■□ 3.09
ITSN2-205ENST00000412011 ATAD2BQ9ULI0 1458 aa34.36■■■■□ 3.09
ITSN2-205ENST00000412011 TRIM41Q8WV44 630 aa34.22■■■■□ 3.07
ITSN2-205ENST00000412011 BAZ1BQ9UIG0 1483 aaKnown RBP34.19■■■■□ 3.06
ITSN2-205ENST00000412011 NCAPD3P42695 1498 aa33.95■■■■□ 3.03
ITSN2-205ENST00000412011 HMGXB3Q12766 1538 aa33.95■■■■□ 3.02
ITSN2-205ENST00000412011 ABCC8Q09428 1581 aa33.88■■■■□ 3.01
ITSN2-205ENST00000412011 LOC105371045A0A1W2PR82 267 aa33.88■■■■□ 3.01
ITSN2-205ENST00000412011 FAM9AQ8IZU1 332 aaPredicted RBP33.68■■■□□ 2.98
ITSN2-205ENST00000412011 CC2D2AQ9P2K1 1620 aa33.62■■■□□ 2.97
ITSN2-205ENST00000412011 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
ITSN2-205ENST00000412011 SYNJ1O43426 1573 aa33.43■■■□□ 2.94
ITSN2-205ENST00000412011 CFTRP13569 1480 aa33.34■■■□□ 2.93
ITSN2-205ENST00000412011 SOGA1O94964 1423 aa33.32■■■□□ 2.92
ITSN2-205ENST00000412011 PRDM2Q13029 1718 aa33.27■■■□□ 2.92
ITSN2-205ENST00000412011 EHMT2Q96KQ7 1210 aa33.25■■■□□ 2.91
ITSN2-205ENST00000412011 EEA1Q15075 1411 aa33.23■■■□□ 2.91
ITSN2-205ENST00000412011 TOP2BQ02880 1626 aa33.22■■■□□ 2.91
ITSN2-205ENST00000412011 RUSC2Q8N2Y8 1516 aa33.2■■■□□ 2.9
ITSN2-205ENST00000412011 BIVM-ERCC5R4GMW8 1640 aa33.19■■■□□ 2.9
ITSN2-205ENST00000412011 CADPSQ9ULU8 1353 aa33.13■■■□□ 2.89
ITSN2-205ENST00000412011 CSRNP3Q8WYN3 585 aa33.07■■■□□ 2.88
ITSN2-205ENST00000412011 CUX1P39880 1505 aa33.06■■■□□ 2.88
ITSN2-205ENST00000412011 GOLGA3Q08378 1498 aa32.85■■■□□ 2.85
ITSN2-205ENST00000412011 KIF21BO75037 1637 aa32.85■■■□□ 2.85
ITSN2-205ENST00000412011 TNIKQ9UKE5 1360 aa32.83■■■□□ 2.85
ITSN2-205ENST00000412011 CEP164Q9UPV0 1460 aa32.8■■■□□ 2.84
ITSN2-205ENST00000412011 FANCD2Q9BXW9 1451 aa32.79■■■□□ 2.84
ITSN2-205ENST00000412011 NESP48681 1621 aa32.78■■■□□ 2.84
ITSN2-205ENST00000412011 PCGF6Q9BYE7 350 aa32.78■■■□□ 2.84
ITSN2-205ENST00000412011 LAMC3Q9Y6N6 1575 aa32.74■■■□□ 2.83
ITSN2-205ENST00000412011 CEP162Q5TB80 1403 aa32.72■■■□□ 2.83
ITSN2-205ENST00000412011 DNAJC5BQ9UF47 199 aa32.71■■■□□ 2.83
ITSN2-205ENST00000412011 UBTFP17480 764 aaKnown RBP32.71■■■□□ 2.83
ITSN2-205ENST00000412011 KIF27Q86VH2 1401 aa32.62■■■□□ 2.81
ITSN2-205ENST00000412011 FGD5Q6ZNL6 1462 aa32.61■■■□□ 2.81
ITSN2-205ENST00000412011 RAPGEF2Q9Y4G8 1499 aa32.61■■■□□ 2.81
ITSN2-205ENST00000412011 TRIM26Q12899 539 aaPredicted RBP32.6■■■□□ 2.81
ITSN2-205ENST00000412011 DNMBPQ6XZF7 1577 aa32.58■■■□□ 2.81
ITSN2-205ENST00000412011 PRXQ9BXM0 1461 aa32.54■■■□□ 2.8
ITSN2-205ENST00000412011 ERICH3Q5RHP9 1530 aa32.51■■■□□ 2.8
ITSN2-205ENST00000412011 TOPBP1Q92547 1522 aa32.5■■■□□ 2.79
ITSN2-205ENST00000412011 CUX2O14529 1486 aa32.48■■■□□ 2.79
ITSN2-205ENST00000412011 PDS5BQ9NTI5 1447 aa32.45■■■□□ 2.78
ITSN2-205ENST00000412011 KIF21AQ7Z4S6 1674 aa32.4■■■□□ 2.78
ITSN2-205ENST00000412011 URB2Q14146 1524 aaKnown RBP32.39■■■□□ 2.77
ITSN2-205ENST00000412011 POLA1P09884 1462 aaPredicted RBP32.37■■■□□ 2.77
ITSN2-205ENST00000412011 CLIP1P30622 1438 aa32.35■■■□□ 2.77
ITSN2-205ENST00000412011 IGF1RP08069 1367 aa32.32■■■□□ 2.76
ITSN2-205ENST00000412011 RAD54L2Q9Y4B4 1467 aa32.31■■■□□ 2.76
ITSN2-205ENST00000412011 ABCA10Q8WWZ4 1543 aa32.3■■■□□ 2.76
ITSN2-205ENST00000412011 PPARGC1BQ86YN6 1023 aaKnown RBP32.28■■■□□ 2.76
ITSN2-205ENST00000412011 WDR97A6NE52 1622 aa32.21■■■□□ 2.75
ITSN2-205ENST00000412011 HRCP23327 699 aa32.18■■■□□ 2.74
ITSN2-205ENST00000412011 CARMIL1Q5VZK9 1371 aa32.16■■■□□ 2.74
ITSN2-205ENST00000412011 VPS8Q8N3P4 1428 aa32.12■■■□□ 2.73
ITSN2-205ENST00000412011 RANGAP1P46060 587 aaPredicted RBP32.11■■■□□ 2.73
ITSN2-205ENST00000412011 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
ITSN2-205ENST00000412011 ABCA5Q8WWZ7 1642 aa32.03■■■□□ 2.72
ITSN2-205ENST00000412011 CUL7Q14999 1698 aa32.02■■■□□ 2.72
ITSN2-205ENST00000412011 ARAP1Q96P48 1450 aa32.01■■■□□ 2.72
ITSN2-205ENST00000412011 TARBP1Q13395 1621 aaKnown RBP31.99■■■□□ 2.71
ITSN2-205ENST00000412011 TDRD9Q8NDG6 1382 aaKnown RBP31.94■■■□□ 2.7
ITSN2-205ENST00000412011 TTBK1Q5TCY1 1321 aaPredicted RBP31.93■■■□□ 2.7
ITSN2-205ENST00000412011 GAPVD1Q14C86 1478 aa31.92■■■□□ 2.7
ITSN2-205ENST00000412011 ARHGAP35Q9NRY4 1499 aa31.91■■■□□ 2.7
ITSN2-205ENST00000412011 WDR62O43379 1518 aa31.85■■■□□ 2.69
ITSN2-205ENST00000412011 CTTNBP2Q8WZ74 1663 aa31.79■■■□□ 2.68
ITSN2-205ENST00000412011 APLP2Q06481 763 aa31.79■■■□□ 2.68
ITSN2-205ENST00000412011 PBRM1Q86U86 1689 aa31.76■■■□□ 2.68
ITSN2-205ENST00000412011 ERCC6Q03468 1493 aa31.76■■■□□ 2.67
ITSN2-205ENST00000412011 IFT140Q96RY7 1462 aa31.7■■■□□ 2.66
ITSN2-205ENST00000412011 THOC2Q8NI27 1593 aaKnown RBP31.7■■■□□ 2.66
ITSN2-205ENST00000412011 AQRO60306 1485 aaKnown RBP eCLIP31.67■■■□□ 2.664e-6■■□□□ 11.8
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms