RNA–Protein interactions for RNA: ENST00000411389.1

RN7SKP293-201, Transcript of RNA, 7SK small nuclear pseudogene 293, humanhuman

BASIC

Gene RN7SKP293, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP293-201ENST00000411389 NISCHQ9Y2I1 1504 aa14.57□□□□□ -0.08
RN7SKP293-201ENST00000411389 ABCC9O60706 1549 aa13.24□□□□□ -0.29
RN7SKP293-201ENST00000411389 CCDC180Q9P1Z9 1646 aa13.17□□□□□ -0.3
RN7SKP293-201ENST00000411389 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
RN7SKP293-201ENST00000411389 RB1CC1Q8TDY2 1594 aa12.63□□□□□ -0.39
RN7SKP293-201ENST00000411389 NACADO15069 1562 aa12.55□□□□□ -0.4
RN7SKP293-201ENST00000411389 MYO15BQ96JP2 1530 aa12.42□□□□□ -0.42
RN7SKP293-201ENST00000411389 PABPN1Q86U42 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
RN7SKP293-201ENST00000411389 DCAF8L2P0C7V8 631 aa12.26□□□□□ -0.45
RN7SKP293-201ENST00000411389 SHROOM4Q9ULL8 1493 aa12.23□□□□□ -0.45
RN7SKP293-201ENST00000411389 BICRAQ9NZM4 1560 aa12.22□□□□□ -0.45
RN7SKP293-201ENST00000411389 UNC13AQ9UPW8 1703 aa12.22□□□□□ -0.45
RN7SKP293-201ENST00000411389 DCAF1Q9Y4B6 1507 aa12.14□□□□□ -0.47
RN7SKP293-201ENST00000411389 CECR2Q9BXF3 1484 aa12.03□□□□□ -0.48
RN7SKP293-201ENST00000411389 ZCCHC6Q5VYS8 1495 aaKnown RBP12.02□□□□□ -0.48
RN7SKP293-201ENST00000411389 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
RN7SKP293-201ENST00000411389 EIF4G1Q04637 1599 aaKnown RBP11.95□□□□□ -0.5
RN7SKP293-201ENST00000411389 DNAJC5Q9H3Z4 198 aa11.89□□□□□ -0.51
RN7SKP293-201ENST00000411389 SCRIBQ14160 1630 aa11.84□□□□□ -0.51
RN7SKP293-201ENST00000411389 AEBP2Q6ZN18 517 aaPredicted RBP11.83□□□□□ -0.52
RN7SKP293-201ENST00000411389 CUX2O14529 1486 aa11.65□□□□□ -0.54
RN7SKP293-201ENST00000411389 CHIC1Q5VXU3 224 aa11.62□□□□□ -0.55
RN7SKP293-201ENST00000411389 NCAPD3P42695 1498 aa11.62□□□□□ -0.55
RN7SKP293-201ENST00000411389 ERCC6Q03468 1493 aa11.5□□□□□ -0.57
RN7SKP293-201ENST00000411389 ATAD2BQ9ULI0 1458 aa11.48□□□□□ -0.57
RN7SKP293-201ENST00000411389 SMARCA2P51531 1590 aa11.47□□□□□ -0.57
RN7SKP293-201ENST00000411389 HMGXB3Q12766 1538 aa11.47□□□□□ -0.57
RN7SKP293-201ENST00000411389 SMARCA4P51532 1647 aa11.36□□□□□ -0.59
RN7SKP293-201ENST00000411389 PEG3Q9GZU2 1588 aa11.36□□□□□ -0.59
RN7SKP293-201ENST00000411389 BAZ1AQ9NRL2 1556 aaPredicted RBP11.33□□□□□ -0.6
RN7SKP293-201ENST00000411389 LAMC3Q9Y6N6 1575 aa11.33□□□□□ -0.6
RN7SKP293-201ENST00000411389 BAZ1BQ9UIG0 1483 aaKnown RBP11.32□□□□□ -0.6
RN7SKP293-201ENST00000411389 NESP48681 1621 aa11.31□□□□□ -0.6
RN7SKP293-201ENST00000411389 PDS5BQ9NTI5 1447 aa11.31□□□□□ -0.6
RN7SKP293-201ENST00000411389 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
RN7SKP293-201ENST00000411389 CADPSQ9ULU8 1353 aa11.22□□□□□ -0.61
RN7SKP293-201ENST00000411389 MROH2BQ7Z745 1585 aa11.16□□□□□ -0.62
RN7SKP293-201ENST00000411389 MRC2Q9UBG0 1479 aa11.15□□□□□ -0.62
RN7SKP293-201ENST00000411389 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
RN7SKP293-201ENST00000411389 WDR62O43379 1518 aa11.14□□□□□ -0.63
RN7SKP293-201ENST00000411389 OSCARQ8IYS5 282 aa11.1□□□□□ -0.63
RN7SKP293-201ENST00000411389 TRIM41Q8WV44 630 aa11.09□□□□□ -0.63
RN7SKP293-201ENST00000411389 CFTRP13569 1480 aa11.06□□□□□ -0.64
RN7SKP293-201ENST00000411389 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
RN7SKP293-201ENST00000411389 FANCD2Q9BXW9 1451 aa11.02□□□□□ -0.65
RN7SKP293-201ENST00000411389 WIZO95785 1651 aa10.96□□□□□ -0.65
RN7SKP293-201ENST00000411389 URB2Q14146 1524 aaKnown RBP10.92□□□□□ -0.66
RN7SKP293-201ENST00000411389 RSF1Q96T23 1441 aaPredicted RBP10.92□□□□□ -0.66
RN7SKP293-201ENST00000411389 TOP2AP11388 1531 aaKnown RBP10.89□□□□□ -0.67
RN7SKP293-201ENST00000411389 IFT140Q96RY7 1462 aa10.89□□□□□ -0.67
RN7SKP293-201ENST00000411389 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
RN7SKP293-201ENST00000411389 RIMBP3CA6NJZ7 1639 aa10.83□□□□□ -0.68
RN7SKP293-201ENST00000411389 RIMBP3BA6NNM3 1639 aa10.83□□□□□ -0.68
RN7SKP293-201ENST00000411389 RIMBP3Q9UFD9 1639 aa10.83□□□□□ -0.68
RN7SKP293-201ENST00000411389 PRDM2Q13029 1718 aa10.82□□□□□ -0.68
RN7SKP293-201ENST00000411389 ARHGEF11O15085 1522 aa10.82□□□□□ -0.68
RN7SKP293-201ENST00000411389 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
RN7SKP293-201ENST00000411389 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
RN7SKP293-201ENST00000411389 CCDC88BA6NC98 1476 aa10.77□□□□□ -0.69
RN7SKP293-201ENST00000411389 CYB5RLQ6IPT4 315 aa10.76□□□□□ -0.69
RN7SKP293-201ENST00000411389 DNMBPQ6XZF7 1577 aa10.73□□□□□ -0.69
RN7SKP293-201ENST00000411389 EIF4G3O43432 1585 aaKnown RBP10.71□□□□□ -0.69
RN7SKP293-201ENST00000411389 TARBP1Q13395 1621 aaKnown RBP10.7□□□□□ -0.7
RN7SKP293-201ENST00000411389 WDR97A6NE52 1622 aa10.69□□□□□ -0.7
RN7SKP293-201ENST00000411389 AQRO60306 1485 aaKnown RBP eCLIP10.69□□□□□ -0.7
RN7SKP293-201ENST00000411389 ARAP1Q96P48 1450 aa10.69□□□□□ -0.7
RN7SKP293-201ENST00000411389 POLA1P09884 1462 aaPredicted RBP10.68□□□□□ -0.7
RN7SKP293-201ENST00000411389 TRHP20396 242 aaPredicted RBP10.67□□□□□ -0.7
RN7SKP293-201ENST00000411389 SOGA1O94964 1423 aa10.64□□□□□ -0.71
RN7SKP293-201ENST00000411389 CHD1O14646 1710 aa10.64□□□□□ -0.71
RN7SKP293-201ENST00000411389 MAGI1Q96QZ7 1491 aaPredicted RBP10.63□□□□□ -0.71
RN7SKP293-201ENST00000411389 FBLN2P98095 1184 aa10.63□□□□□ -0.71
RN7SKP293-201ENST00000411389 CHMP7Q8WUX9 453 aaPredicted RBP10.61□□□□□ -0.71
RN7SKP293-201ENST00000411389 CLASP1Q7Z460 1538 aa10.6□□□□□ -0.71
RN7SKP293-201ENST00000411389 TDRD9Q8NDG6 1382 aaKnown RBP10.6□□□□□ -0.71
RN7SKP293-201ENST00000411389 GRIN2BQ13224 1484 aa10.59□□□□□ -0.71
RN7SKP293-201ENST00000411389 SYNJ1O43426 1573 aa10.59□□□□□ -0.71
RN7SKP293-201ENST00000411389 SYNJ2O15056 1496 aa10.58□□□□□ -0.72
RN7SKP293-201ENST00000411389 RAD54L2Q9Y4B4 1467 aa10.57□□□□□ -0.72
RN7SKP293-201ENST00000411389 SNAPC4Q5SXM2 1469 aa10.56□□□□□ -0.72
RN7SKP293-201ENST00000411389 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
RN7SKP293-201ENST00000411389 GAPVD1Q14C86 1478 aa10.5□□□□□ -0.73
RN7SKP293-201ENST00000411389 CUX1P39880 1505 aa10.5□□□□□ -0.73
RN7SKP293-201ENST00000411389 ABCA10Q8WWZ4 1543 aa10.49□□□□□ -0.73
RN7SKP293-201ENST00000411389 NUP160Q12769 1436 aa10.44□□□□□ -0.74
RN7SKP293-201ENST00000411389 GRIN2AQ12879 1464 aa10.42□□□□□ -0.74
RN7SKP293-201ENST00000411389 ABCA5Q8WWZ7 1642 aa10.42□□□□□ -0.74
RN7SKP293-201ENST00000411389 WRNQ14191 1432 aaPredicted RBP eCLIP10.41□□□□□ -0.74
RN7SKP293-201ENST00000411389 PBRM1Q86U86 1689 aa10.41□□□□□ -0.74
RN7SKP293-201ENST00000411389 FHAD1B1AJZ9 1412 aa10.4□□□□□ -0.75
RN7SKP293-201ENST00000411389 SHROOM2Q13796 1616 aa10.38□□□□□ -0.75
RN7SKP293-201ENST00000411389 CEP170Q5SW79 1584 aa10.37□□□□□ -0.75
RN7SKP293-201ENST00000411389 ERICH3Q5RHP9 1530 aa10.37□□□□□ -0.75
RN7SKP293-201ENST00000411389 JPH4Q96JJ6 628 aa10.34□□□□□ -0.75
RN7SKP293-201ENST00000411389 ADAMTS12P58397 1594 aa10.34□□□□□ -0.75
RN7SKP293-201ENST00000411389 ERCC6L2Q5T890 1561 aa10.32□□□□□ -0.76
RN7SKP293-201ENST00000411389 TOP2BQ02880 1626 aa10.32□□□□□ -0.76
RN7SKP293-201ENST00000411389 ABCC10Q5T3U5 1492 aa10.3□□□□□ -0.76
RN7SKP293-201ENST00000411389 NPM1P06748 294 aaKnown RBP eCLIP10.3□□□□□ -0.76
RN7SKP293-201ENST00000411389 PRG4Q92954 1404 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms