RNA–Protein interactions for RNA: ENST00000411373.1

RN7SKP30-201, Transcript of RNA, 7SK small nuclear pseudogene 30, humanhuman

BASIC

Gene RN7SKP30, Length 334 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP30-201ENST00000411373 NISCHQ9Y2I1 1504 aa18.25■□□□□ 0.51
RN7SKP30-201ENST00000411373 ABCC9O60706 1549 aa16.7■□□□□ 0.26
RN7SKP30-201ENST00000411373 CCDC180Q9P1Z9 1646 aa16.47■□□□□ 0.23
RN7SKP30-201ENST00000411373 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
RN7SKP30-201ENST00000411373 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
RN7SKP30-201ENST00000411373 DCAF8L2P0C7V8 631 aa15.71■□□□□ 0.11
RN7SKP30-201ENST00000411373 NACADO15069 1562 aa15.61■□□□□ 0.09
RN7SKP30-201ENST00000411373 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
RN7SKP30-201ENST00000411373 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
RN7SKP30-201ENST00000411373 BICRAQ9NZM4 1560 aa15.26■□□□□ 0.03
RN7SKP30-201ENST00000411373 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
RN7SKP30-201ENST00000411373 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
RN7SKP30-201ENST00000411373 SCRIBQ14160 1630 aa15.06■□□□□ 0
RN7SKP30-201ENST00000411373 CC2D2AQ9P2K1 1620 aa15.04■□□□□ -0
RN7SKP30-201ENST00000411373 CECR2Q9BXF3 1484 aa15.04■□□□□ -0
RN7SKP30-201ENST00000411373 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
RN7SKP30-201ENST00000411373 DCAF1Q9Y4B6 1507 aa15□□□□□ -0.01
RN7SKP30-201ENST00000411373 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
RN7SKP30-201ENST00000411373 DNAJC5Q9H3Z4 198 aa14.61□□□□□ -0.07
RN7SKP30-201ENST00000411373 ERCC6Q03468 1493 aa14.48□□□□□ -0.09
RN7SKP30-201ENST00000411373 CUX2O14529 1486 aa14.41□□□□□ -0.1
RN7SKP30-201ENST00000411373 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
RN7SKP30-201ENST00000411373 ATAD2BQ9ULI0 1458 aa14.32□□□□□ -0.12
RN7SKP30-201ENST00000411373 SMARCA2P51531 1590 aa14.32□□□□□ -0.12
RN7SKP30-201ENST00000411373 SMARCA4P51532 1647 aa14.3□□□□□ -0.12
RN7SKP30-201ENST00000411373 NESP48681 1621 aa14.26□□□□□ -0.13
RN7SKP30-201ENST00000411373 HMGXB3Q12766 1538 aa14.26□□□□□ -0.13
RN7SKP30-201ENST00000411373 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
RN7SKP30-201ENST00000411373 BAZ1AQ9NRL2 1556 aaPredicted RBP14.2□□□□□ -0.14
RN7SKP30-201ENST00000411373 LAMC3Q9Y6N6 1575 aa14.13□□□□□ -0.15
RN7SKP30-201ENST00000411373 THOC2Q8NI27 1593 aaKnown RBP14.12□□□□□ -0.15
RN7SKP30-201ENST00000411373 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
RN7SKP30-201ENST00000411373 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
RN7SKP30-201ENST00000411373 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.16
RN7SKP30-201ENST00000411373 MROH2BQ7Z745 1585 aa14.07□□□□□ -0.16
RN7SKP30-201ENST00000411373 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
RN7SKP30-201ENST00000411373 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.17
RN7SKP30-201ENST00000411373 MRC2Q9UBG0 1479 aa13.95□□□□□ -0.18
RN7SKP30-201ENST00000411373 WIZO95785 1651 aa13.94□□□□□ -0.18
RN7SKP30-201ENST00000411373 CEP164Q9UPV0 1460 aa13.88□□□□□ -0.19
RN7SKP30-201ENST00000411373 WDR62O43379 1518 aa13.88□□□□□ -0.19
RN7SKP30-201ENST00000411373 FANCD2Q9BXW9 1451 aa13.83□□□□□ -0.2
RN7SKP30-201ENST00000411373 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
RN7SKP30-201ENST00000411373 CFTRP13569 1480 aa13.74□□□□□ -0.21
RN7SKP30-201ENST00000411373 TOP2AP11388 1531 aaKnown RBP13.71□□□□□ -0.21
RN7SKP30-201ENST00000411373 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
RN7SKP30-201ENST00000411373 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
RN7SKP30-201ENST00000411373 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
RN7SKP30-201ENST00000411373 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
RN7SKP30-201ENST00000411373 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
RN7SKP30-201ENST00000411373 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
RN7SKP30-201ENST00000411373 IFT140Q96RY7 1462 aa13.59□□□□□ -0.23
RN7SKP30-201ENST00000411373 ZNF608Q9ULD9 1512 aaPredicted RBP13.57□□□□□ -0.24
RN7SKP30-201ENST00000411373 CCDC88BA6NC98 1476 aa13.56□□□□□ -0.24
RN7SKP30-201ENST00000411373 TOPBP1Q92547 1522 aa13.54□□□□□ -0.24
RN7SKP30-201ENST00000411373 FBLN2P98095 1184 aa13.53□□□□□ -0.24
RN7SKP30-201ENST00000411373 CYB5RLQ6IPT4 315 aa13.52□□□□□ -0.25
RN7SKP30-201ENST00000411373 ARHGEF11O15085 1522 aa13.52□□□□□ -0.25
RN7SKP30-201ENST00000411373 ABCC8Q09428 1581 aa13.52□□□□□ -0.25
RN7SKP30-201ENST00000411373 EIF4G3O43432 1585 aaKnown RBP13.51□□□□□ -0.25
RN7SKP30-201ENST00000411373 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
RN7SKP30-201ENST00000411373 CHD1O14646 1710 aa13.48□□□□□ -0.25
RN7SKP30-201ENST00000411373 DNMBPQ6XZF7 1577 aa13.48□□□□□ -0.25
RN7SKP30-201ENST00000411373 AQRO60306 1485 aaKnown RBP eCLIP13.46□□□□□ -0.25
RN7SKP30-201ENST00000411373 TARBP1Q13395 1621 aaKnown RBP13.41□□□□□ -0.26
RN7SKP30-201ENST00000411373 POLA1P09884 1462 aaPredicted RBP13.38□□□□□ -0.27
RN7SKP30-201ENST00000411373 SOGA1O94964 1423 aa13.37□□□□□ -0.27
RN7SKP30-201ENST00000411373 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
RN7SKP30-201ENST00000411373 TDRD9Q8NDG6 1382 aaKnown RBP13.36□□□□□ -0.27
RN7SKP30-201ENST00000411373 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
RN7SKP30-201ENST00000411373 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
RN7SKP30-201ENST00000411373 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
RN7SKP30-201ENST00000411373 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
RN7SKP30-201ENST00000411373 SYNJ1O43426 1573 aa13.29□□□□□ -0.28
RN7SKP30-201ENST00000411373 AEBP2Q6ZN18 517 aaPredicted RBP13.28□□□□□ -0.28
RN7SKP30-201ENST00000411373 WDR97A6NE52 1622 aa13.26□□□□□ -0.29
RN7SKP30-201ENST00000411373 GRIN2BQ13224 1484 aa13.25□□□□□ -0.29
RN7SKP30-201ENST00000411373 MAGI1Q96QZ7 1491 aaPredicted RBP13.24□□□□□ -0.29
RN7SKP30-201ENST00000411373 CUX1P39880 1505 aa13.23□□□□□ -0.29
RN7SKP30-201ENST00000411373 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
RN7SKP30-201ENST00000411373 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
RN7SKP30-201ENST00000411373 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
RN7SKP30-201ENST00000411373 GAPVD1Q14C86 1478 aa13.19□□□□□ -0.3
RN7SKP30-201ENST00000411373 SUPT5HO00267 1087 aaKnown RBP13.14□□□□□ -0.31
RN7SKP30-201ENST00000411373 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
RN7SKP30-201ENST00000411373 ABCA10Q8WWZ4 1543 aa13.09□□□□□ -0.31
RN7SKP30-201ENST00000411373 GRIN2AQ12879 1464 aa13.07□□□□□ -0.32
RN7SKP30-201ENST00000411373 WRNQ14191 1432 aaPredicted RBP eCLIP13.06□□□□□ -0.32
RN7SKP30-201ENST00000411373 ERCC6L2Q5T890 1561 aa13.04□□□□□ -0.32
RN7SKP30-201ENST00000411373 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
RN7SKP30-201ENST00000411373 CEP170Q5SW79 1584 aa13.03□□□□□ -0.32
RN7SKP30-201ENST00000411373 FHAD1B1AJZ9 1412 aa13□□□□□ -0.33
RN7SKP30-201ENST00000411373 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
RN7SKP30-201ENST00000411373 NUP160Q12769 1436 aa12.98□□□□□ -0.33
RN7SKP30-201ENST00000411373 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
RN7SKP30-201ENST00000411373 NPM1P06748 294 aaKnown RBP eCLIP12.97□□□□□ -0.33
RN7SKP30-201ENST00000411373 PRG4Q92954 1404 aaPredicted RBP12.95□□□□□ -0.34
RN7SKP30-201ENST00000411373 SHROOM2Q13796 1616 aa12.95□□□□□ -0.34
RN7SKP30-201ENST00000411373 ERICH3Q5RHP9 1530 aa12.94□□□□□ -0.34
RN7SKP30-201ENST00000411373 KIF13AQ9H1H9 1805 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms