RNA–Protein interactions for RNA: ENST00000411107.1

RN7SKP268-201, Transcript of RNA, 7SK small nuclear pseudogene 268, humanhuman

BASIC

Gene RN7SKP268, Length 316 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP268-201ENST00000411107 NISCHQ9Y2I1 1504 aa17.07■□□□□ 0.32
RN7SKP268-201ENST00000411107 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
RN7SKP268-201ENST00000411107 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
RN7SKP268-201ENST00000411107 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
RN7SKP268-201ENST00000411107 ABCC9O60706 1549 aa15.08■□□□□ 0.01
RN7SKP268-201ENST00000411107 DCAF8L2P0C7V8 631 aa14.51□□□□□ -0.09
RN7SKP268-201ENST00000411107 RB1CC1Q8TDY2 1594 aa14.42□□□□□ -0.1
RN7SKP268-201ENST00000411107 NACADO15069 1562 aa14.36□□□□□ -0.11
RN7SKP268-201ENST00000411107 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
RN7SKP268-201ENST00000411107 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
RN7SKP268-201ENST00000411107 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
RN7SKP268-201ENST00000411107 DCAF1Q9Y4B6 1507 aa14.09□□□□□ -0.15
RN7SKP268-201ENST00000411107 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
RN7SKP268-201ENST00000411107 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
RN7SKP268-201ENST00000411107 BICRAQ9NZM4 1560 aa13.94□□□□□ -0.18
RN7SKP268-201ENST00000411107 SCRIBQ14160 1630 aa13.9□□□□□ -0.18
RN7SKP268-201ENST00000411107 SHROOM4Q9ULL8 1493 aa13.79□□□□□ -0.2
RN7SKP268-201ENST00000411107 EIF4G1Q04637 1599 aaKnown RBP13.62□□□□□ -0.23
RN7SKP268-201ENST00000411107 CC2D2AQ9P2K1 1620 aa13.59□□□□□ -0.23
RN7SKP268-201ENST00000411107 CECR2Q9BXF3 1484 aa13.56□□□□□ -0.24
RN7SKP268-201ENST00000411107 SENP3Q9H4L4 574 aaPredicted RBP13.35□□□□□ -0.27
RN7SKP268-201ENST00000411107 PHF23Q9BUL5 403 aaPredicted RBP13.27□□□□□ -0.29
RN7SKP268-201ENST00000411107 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
RN7SKP268-201ENST00000411107 SMARCA4P51532 1647 aa13.26□□□□□ -0.29
RN7SKP268-201ENST00000411107 ATAD2BQ9ULI0 1458 aa13.25□□□□□ -0.29
RN7SKP268-201ENST00000411107 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
RN7SKP268-201ENST00000411107 SMARCA2P51531 1590 aa13.23□□□□□ -0.29
RN7SKP268-201ENST00000411107 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
RN7SKP268-201ENST00000411107 MROH2BQ7Z745 1585 aa13.15□□□□□ -0.3
RN7SKP268-201ENST00000411107 HMGXB3Q12766 1538 aa13.15□□□□□ -0.3
RN7SKP268-201ENST00000411107 PEG3Q9GZU2 1588 aa13.11□□□□□ -0.31
RN7SKP268-201ENST00000411107 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
RN7SKP268-201ENST00000411107 WIZO95785 1651 aa13.01□□□□□ -0.33
RN7SKP268-201ENST00000411107 NESP48681 1621 aa12.99□□□□□ -0.33
RN7SKP268-201ENST00000411107 RSF1Q96T23 1441 aaPredicted RBP12.98□□□□□ -0.33
RN7SKP268-201ENST00000411107 LAMC3Q9Y6N6 1575 aa12.92□□□□□ -0.34
RN7SKP268-201ENST00000411107 CADPSQ9ULU8 1353 aa12.9□□□□□ -0.34
RN7SKP268-201ENST00000411107 PDS5BQ9NTI5 1447 aa12.89□□□□□ -0.35
RN7SKP268-201ENST00000411107 CUX2O14529 1486 aa12.89□□□□□ -0.35
RN7SKP268-201ENST00000411107 TOP2AP11388 1531 aaKnown RBP12.85□□□□□ -0.35
RN7SKP268-201ENST00000411107 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
RN7SKP268-201ENST00000411107 CFTRP13569 1480 aa12.76□□□□□ -0.37
RN7SKP268-201ENST00000411107 THOC2Q8NI27 1593 aaKnown RBP12.76□□□□□ -0.37
RN7SKP268-201ENST00000411107 CCDC88BA6NC98 1476 aa12.74□□□□□ -0.37
RN7SKP268-201ENST00000411107 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
RN7SKP268-201ENST00000411107 MRC2Q9UBG0 1479 aa12.73□□□□□ -0.37
RN7SKP268-201ENST00000411107 CEP164Q9UPV0 1460 aa12.73□□□□□ -0.37
RN7SKP268-201ENST00000411107 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
RN7SKP268-201ENST00000411107 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
RN7SKP268-201ENST00000411107 WDR62O43379 1518 aa12.66□□□□□ -0.38
RN7SKP268-201ENST00000411107 URB2Q14146 1524 aaKnown RBP12.59□□□□□ -0.39
RN7SKP268-201ENST00000411107 PRDM2Q13029 1718 aa12.58□□□□□ -0.4
RN7SKP268-201ENST00000411107 ABCC8Q09428 1581 aa12.52□□□□□ -0.4
RN7SKP268-201ENST00000411107 TOPBP1Q92547 1522 aa12.5□□□□□ -0.41
RN7SKP268-201ENST00000411107 IFT140Q96RY7 1462 aa12.47□□□□□ -0.41
RN7SKP268-201ENST00000411107 DNMBPQ6XZF7 1577 aa12.47□□□□□ -0.41
RN7SKP268-201ENST00000411107 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
RN7SKP268-201ENST00000411107 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
RN7SKP268-201ENST00000411107 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
RN7SKP268-201ENST00000411107 SOGA1O94964 1423 aa12.38□□□□□ -0.43
RN7SKP268-201ENST00000411107 AQRO60306 1485 aaKnown RBP eCLIP12.37□□□□□ -0.43
RN7SKP268-201ENST00000411107 RAD54L2Q9Y4B4 1467 aa12.36□□□□□ -0.43
RN7SKP268-201ENST00000411107 FGD5Q6ZNL6 1462 aa12.35□□□□□ -0.43
RN7SKP268-201ENST00000411107 PLPPR3Q6T4P5 718 aa12.35□□□□□ -0.43
RN7SKP268-201ENST00000411107 CUX1P39880 1505 aa12.35□□□□□ -0.43
RN7SKP268-201ENST00000411107 TARBP1Q13395 1621 aaKnown RBP12.34□□□□□ -0.43
RN7SKP268-201ENST00000411107 TDRD9Q8NDG6 1382 aaKnown RBP12.34□□□□□ -0.43
RN7SKP268-201ENST00000411107 FBLN2P98095 1184 aa12.34□□□□□ -0.43
RN7SKP268-201ENST00000411107 FOXD1Q16676 465 aa12.34□□□□□ -0.43
RN7SKP268-201ENST00000411107 EIF4G3O43432 1585 aaKnown RBP12.33□□□□□ -0.44
RN7SKP268-201ENST00000411107 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
RN7SKP268-201ENST00000411107 CHMP7Q8WUX9 453 aaPredicted RBP12.26□□□□□ -0.45
RN7SKP268-201ENST00000411107 WRNQ14191 1432 aaPredicted RBP eCLIP12.26□□□□□ -0.45
RN7SKP268-201ENST00000411107 WDR97A6NE52 1622 aa12.23□□□□□ -0.45
RN7SKP268-201ENST00000411107 GRIN2BQ13224 1484 aa12.22□□□□□ -0.45
RN7SKP268-201ENST00000411107 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
RN7SKP268-201ENST00000411107 SNAPC4Q5SXM2 1469 aa12.22□□□□□ -0.45
RN7SKP268-201ENST00000411107 ABCA10Q8WWZ4 1543 aa12.21□□□□□ -0.46
RN7SKP268-201ENST00000411107 TOP2BQ02880 1626 aa12.2□□□□□ -0.46
RN7SKP268-201ENST00000411107 MAGI1Q96QZ7 1491 aaPredicted RBP12.2□□□□□ -0.46
RN7SKP268-201ENST00000411107 CHD1O14646 1710 aa12.2□□□□□ -0.46
RN7SKP268-201ENST00000411107 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
RN7SKP268-201ENST00000411107 BIVM-ERCC5R4GMW8 1640 aa12.18□□□□□ -0.46
RN7SKP268-201ENST00000411107 SYNJ2O15056 1496 aa12.15□□□□□ -0.46
RN7SKP268-201ENST00000411107 CYB5RLQ6IPT4 315 aa12.14□□□□□ -0.47
RN7SKP268-201ENST00000411107 RIMBP3CA6NJZ7 1639 aa12.14□□□□□ -0.47
RN7SKP268-201ENST00000411107 RIMBP3BA6NNM3 1639 aa12.14□□□□□ -0.47
RN7SKP268-201ENST00000411107 RIMBP3Q9UFD9 1639 aa12.14□□□□□ -0.47
RN7SKP268-201ENST00000411107 PBRM1Q86U86 1689 aa12.13□□□□□ -0.47
RN7SKP268-201ENST00000411107 ARHGEF11O15085 1522 aa12.13□□□□□ -0.47
RN7SKP268-201ENST00000411107 ABCA5Q8WWZ7 1642 aa12.13□□□□□ -0.47
RN7SKP268-201ENST00000411107 FHAD1B1AJZ9 1412 aa12.07□□□□□ -0.48
RN7SKP268-201ENST00000411107 GRIN2AQ12879 1464 aa12.06□□□□□ -0.48
RN7SKP268-201ENST00000411107 ERICH3Q5RHP9 1530 aa12.06□□□□□ -0.48
RN7SKP268-201ENST00000411107 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
RN7SKP268-201ENST00000411107 ADAMTS12P58397 1594 aa12.04□□□□□ -0.48
RN7SKP268-201ENST00000411107 KIF27Q86VH2 1401 aa12.03□□□□□ -0.48
RN7SKP268-201ENST00000411107 ARAP1Q96P48 1450 aa12.02□□□□□ -0.49
RN7SKP268-201ENST00000411107 IGF1RP08069 1367 aa11.99□□□□□ -0.49
RN7SKP268-201ENST00000411107 NUP160Q12769 1436 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms