RNA–Protein interactions for RNA: ENST00000411066.1

RN7SKP259-201, Transcript of RNA, 7SK small nuclear pseudogene 259, humanhuman

BASIC

Gene RN7SKP259, Length 333 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP259-201ENST00000411066 NISCHQ9Y2I1 1504 aa23.78■■□□□ 1.4
RN7SKP259-201ENST00000411066 CCDC180Q9P1Z9 1646 aa20.66■□□□□ 0.9
RN7SKP259-201ENST00000411066 ZCCHC6Q5VYS8 1495 aaKnown RBP20.03■□□□□ 0.8
RN7SKP259-201ENST00000411066 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
RN7SKP259-201ENST00000411066 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
RN7SKP259-201ENST00000411066 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
RN7SKP259-201ENST00000411066 MYO15BQ96JP2 1530 aa19.41■□□□□ 0.7
RN7SKP259-201ENST00000411066 ABCC9O60706 1549 aa19.2■□□□□ 0.66
RN7SKP259-201ENST00000411066 NACADO15069 1562 aa19.18■□□□□ 0.66
RN7SKP259-201ENST00000411066 SCRIBQ14160 1630 aa18.94■□□□□ 0.62
RN7SKP259-201ENST00000411066 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
RN7SKP259-201ENST00000411066 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
RN7SKP259-201ENST00000411066 UNC13AQ9UPW8 1703 aa18.53■□□□□ 0.56
RN7SKP259-201ENST00000411066 RSF1Q96T23 1441 aaPredicted RBP18.52■□□□□ 0.56
RN7SKP259-201ENST00000411066 CECR2Q9BXF3 1484 aa18.4■□□□□ 0.54
RN7SKP259-201ENST00000411066 MROH2BQ7Z745 1585 aa18.35■□□□□ 0.53
RN7SKP259-201ENST00000411066 BAZ1AQ9NRL2 1556 aaPredicted RBP18.35■□□□□ 0.53
RN7SKP259-201ENST00000411066 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.52
RN7SKP259-201ENST00000411066 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
RN7SKP259-201ENST00000411066 SMARCA4P51532 1647 aa18.22■□□□□ 0.51
RN7SKP259-201ENST00000411066 WIZO95785 1651 aa18.21■□□□□ 0.51
RN7SKP259-201ENST00000411066 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
RN7SKP259-201ENST00000411066 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
RN7SKP259-201ENST00000411066 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
RN7SKP259-201ENST00000411066 SMARCA2P51531 1590 aa17.89■□□□□ 0.45
RN7SKP259-201ENST00000411066 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
RN7SKP259-201ENST00000411066 EIF4G1Q04637 1599 aaKnown RBP17.86■□□□□ 0.45
RN7SKP259-201ENST00000411066 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
RN7SKP259-201ENST00000411066 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
RN7SKP259-201ENST00000411066 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
RN7SKP259-201ENST00000411066 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
RN7SKP259-201ENST00000411066 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
RN7SKP259-201ENST00000411066 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
RN7SKP259-201ENST00000411066 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
RN7SKP259-201ENST00000411066 WRNQ14191 1432 aaPredicted RBP eCLIP17.44■□□□□ 0.38
RN7SKP259-201ENST00000411066 CC2D2AQ9P2K1 1620 aa17.41■□□□□ 0.38
RN7SKP259-201ENST00000411066 EEA1Q15075 1411 aa17.39■□□□□ 0.38
RN7SKP259-201ENST00000411066 FAM9AQ8IZU1 332 aaPredicted RBP17.39■□□□□ 0.37
RN7SKP259-201ENST00000411066 CFTRP13569 1480 aa17.35■□□□□ 0.37
RN7SKP259-201ENST00000411066 SYNJ1O43426 1573 aa17.33■□□□□ 0.37
RN7SKP259-201ENST00000411066 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
RN7SKP259-201ENST00000411066 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
RN7SKP259-201ENST00000411066 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
RN7SKP259-201ENST00000411066 SOGA1O94964 1423 aa17.26■□□□□ 0.35
RN7SKP259-201ENST00000411066 CADPSQ9ULU8 1353 aa17.23■□□□□ 0.35
RN7SKP259-201ENST00000411066 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
RN7SKP259-201ENST00000411066 RUSC2Q8N2Y8 1516 aa17.17■□□□□ 0.34
RN7SKP259-201ENST00000411066 CUX1P39880 1505 aa17.15■□□□□ 0.34
RN7SKP259-201ENST00000411066 KIF21BO75037 1637 aa17.12■□□□□ 0.33
RN7SKP259-201ENST00000411066 TNIKQ9UKE5 1360 aa17.12■□□□□ 0.33
RN7SKP259-201ENST00000411066 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
RN7SKP259-201ENST00000411066 CEP164Q9UPV0 1460 aa17.09■□□□□ 0.33
RN7SKP259-201ENST00000411066 EHMT2Q96KQ7 1210 aa17.07■□□□□ 0.32
RN7SKP259-201ENST00000411066 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
RN7SKP259-201ENST00000411066 FANCD2Q9BXW9 1451 aa17.03■□□□□ 0.32
RN7SKP259-201ENST00000411066 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
RN7SKP259-201ENST00000411066 CEP162Q5TB80 1403 aa17■□□□□ 0.31
RN7SKP259-201ENST00000411066 KIF27Q86VH2 1401 aa16.99■□□□□ 0.31
RN7SKP259-201ENST00000411066 PCGF6Q9BYE7 350 aa16.99■□□□□ 0.31
RN7SKP259-201ENST00000411066 UBTFP17480 764 aaKnown RBP16.97■□□□□ 0.31
RN7SKP259-201ENST00000411066 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
RN7SKP259-201ENST00000411066 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
RN7SKP259-201ENST00000411066 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
RN7SKP259-201ENST00000411066 NESP48681 1621 aa16.93■□□□□ 0.3
RN7SKP259-201ENST00000411066 FGD5Q6ZNL6 1462 aa16.92■□□□□ 0.3
RN7SKP259-201ENST00000411066 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
RN7SKP259-201ENST00000411066 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
RN7SKP259-201ENST00000411066 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
RN7SKP259-201ENST00000411066 CUX2O14529 1486 aa16.86■□□□□ 0.29
RN7SKP259-201ENST00000411066 CLIP1P30622 1438 aa16.82■□□□□ 0.28
RN7SKP259-201ENST00000411066 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
RN7SKP259-201ENST00000411066 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
RN7SKP259-201ENST00000411066 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
RN7SKP259-201ENST00000411066 IGF1RP08069 1367 aa16.79■□□□□ 0.28
RN7SKP259-201ENST00000411066 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
RN7SKP259-201ENST00000411066 HRCP23327 699 aa16.77■□□□□ 0.28
RN7SKP259-201ENST00000411066 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
RN7SKP259-201ENST00000411066 VPS8Q8N3P4 1428 aa16.73■□□□□ 0.27
RN7SKP259-201ENST00000411066 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
RN7SKP259-201ENST00000411066 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
RN7SKP259-201ENST00000411066 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
RN7SKP259-201ENST00000411066 CUL7Q14999 1698 aa16.69■□□□□ 0.26
RN7SKP259-201ENST00000411066 MRC2Q9UBG0 1479 aa16.66■□□□□ 0.26
RN7SKP259-201ENST00000411066 ABCA5Q8WWZ7 1642 aa16.64■□□□□ 0.25
RN7SKP259-201ENST00000411066 ARAP1Q96P48 1450 aa16.62■□□□□ 0.25
RN7SKP259-201ENST00000411066 TARBP1Q13395 1621 aaKnown RBP16.61■□□□□ 0.25
RN7SKP259-201ENST00000411066 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
RN7SKP259-201ENST00000411066 GAPVD1Q14C86 1478 aa16.58■□□□□ 0.24
RN7SKP259-201ENST00000411066 ARHGAP35Q9NRY4 1499 aa16.57■□□□□ 0.24
RN7SKP259-201ENST00000411066 APLP2Q06481 763 aa16.56■□□□□ 0.24
RN7SKP259-201ENST00000411066 WDR62O43379 1518 aa16.55■□□□□ 0.24
RN7SKP259-201ENST00000411066 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
RN7SKP259-201ENST00000411066 RANGAP1P46060 587 aaPredicted RBP16.52■□□□□ 0.24
RN7SKP259-201ENST00000411066 CTTNBP2Q8WZ74 1663 aa16.52■□□□□ 0.23
RN7SKP259-201ENST00000411066 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
RN7SKP259-201ENST00000411066 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
RN7SKP259-201ENST00000411066 EFCAB5A4FU69 1503 aa16.49■□□□□ 0.23
RN7SKP259-201ENST00000411066 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
RN7SKP259-201ENST00000411066 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
RN7SKP259-201ENST00000411066 MAP3K1Q13233 1512 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms