RNA–Protein interactions for RNA: ENST00000410876.1

RNU4-47P-201, Transcript of RNA, U4 small nuclear 47, pseudogene, humanhuman

BASIC

Gene RNU4-47P, Length 114 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-47P-201ENST00000410876 NISCHQ9Y2I1 1504 aa7.92□□□□□ -1.14
RNU4-47P-201ENST00000410876 CCDC180Q9P1Z9 1646 aa7.07□□□□□ -1.28
RNU4-47P-201ENST00000410876 ABCC9O60706 1549 aa6.94□□□□□ -1.3
RNU4-47P-201ENST00000410876 MYO15BQ96JP2 1530 aa6.75□□□□□ -1.33
RNU4-47P-201ENST00000410876 NACADO15069 1562 aa6.74□□□□□ -1.33
RNU4-47P-201ENST00000410876 RB1CC1Q8TDY2 1594 aa6.74□□□□□ -1.33
RNU4-47P-201ENST00000410876 DCAF1Q9Y4B6 1507 aa6.64□□□□□ -1.35
RNU4-47P-201ENST00000410876 DCAF8L2P0C7V8 631 aa6.61□□□□□ -1.35
RNU4-47P-201ENST00000410876 SHROOM4Q9ULL8 1493 aa6.57□□□□□ -1.36
RNU4-47P-201ENST00000410876 ZCCHC6Q5VYS8 1495 aaKnown RBP6.55□□□□□ -1.36
RNU4-47P-201ENST00000410876 DNAJC5BQ9UF47 199 aa6.5□□□□□ -1.37
RNU4-47P-201ENST00000410876 PABPN1Q86U42 306 aaKnown RBP eCLIP6.49□□□□□ -1.37
RNU4-47P-201ENST00000410876 BICRAQ9NZM4 1560 aa6.46□□□□□ -1.38
RNU4-47P-201ENST00000410876 UNC13AQ9UPW8 1703 aa6.42□□□□□ -1.38
RNU4-47P-201ENST00000410876 SCRIBQ14160 1630 aa6.33□□□□□ -1.4
RNU4-47P-201ENST00000410876 EIF4G1Q04637 1599 aaKnown RBP6.32□□□□□ -1.4
RNU4-47P-201ENST00000410876 CECR2Q9BXF3 1484 aa6.31□□□□□ -1.4
RNU4-47P-201ENST00000410876 CC2D2AQ9P2K1 1620 aa6.29□□□□□ -1.4
RNU4-47P-201ENST00000410876 NCAPD3P42695 1498 aa6.24□□□□□ -1.41
RNU4-47P-201ENST00000410876 SMARCA2P51531 1590 aa6.18□□□□□ -1.42
RNU4-47P-201ENST00000410876 ATAD2BQ9ULI0 1458 aa6.16□□□□□ -1.42
RNU4-47P-201ENST00000410876 BAZ1AQ9NRL2 1556 aaPredicted RBP6.16□□□□□ -1.42
RNU4-47P-201ENST00000410876 HMGXB3Q12766 1538 aa6.15□□□□□ -1.42
RNU4-47P-201ENST00000410876 PEG3Q9GZU2 1588 aa6.14□□□□□ -1.43
RNU4-47P-201ENST00000410876 SMARCA4P51532 1647 aa6.11□□□□□ -1.43
RNU4-47P-201ENST00000410876 CUX2O14529 1486 aa6.09□□□□□ -1.43
RNU4-47P-201ENST00000410876 BAZ1BQ9UIG0 1483 aaKnown RBP6.09□□□□□ -1.44
RNU4-47P-201ENST00000410876 DNAJC5Q9H3Z4 198 aa6.06□□□□□ -1.44
RNU4-47P-201ENST00000410876 PDS5BQ9NTI5 1447 aa6.06□□□□□ -1.44
RNU4-47P-201ENST00000410876 LAMC3Q9Y6N6 1575 aa6.05□□□□□ -1.44
RNU4-47P-201ENST00000410876 ERCC6Q03468 1493 aa6.04□□□□□ -1.44
RNU4-47P-201ENST00000410876 CADPSQ9ULU8 1353 aa6.04□□□□□ -1.44
RNU4-47P-201ENST00000410876 MROH2BQ7Z745 1585 aa6.03□□□□□ -1.44
RNU4-47P-201ENST00000410876 RSF1Q96T23 1441 aaPredicted RBP5.99□□□□□ -1.45
RNU4-47P-201ENST00000410876 CFTRP13569 1480 aa5.96□□□□□ -1.45
RNU4-47P-201ENST00000410876 NESP48681 1621 aa5.96□□□□□ -1.46
RNU4-47P-201ENST00000410876 TOP2AP11388 1531 aaKnown RBP5.93□□□□□ -1.46
RNU4-47P-201ENST00000410876 MRC2Q9UBG0 1479 aa5.92□□□□□ -1.46
RNU4-47P-201ENST00000410876 WIZO95785 1651 aa5.91□□□□□ -1.46
RNU4-47P-201ENST00000410876 CEP164Q9UPV0 1460 aa5.91□□□□□ -1.46
RNU4-47P-201ENST00000410876 ABCC8Q09428 1581 aa5.91□□□□□ -1.46
RNU4-47P-201ENST00000410876 FANCD2Q9BXW9 1451 aa5.9□□□□□ -1.46
RNU4-47P-201ENST00000410876 WDR62O43379 1518 aa5.9□□□□□ -1.46
RNU4-47P-201ENST00000410876 THOC2Q8NI27 1593 aaKnown RBP5.9□□□□□ -1.46
RNU4-47P-201ENST00000410876 OSCARQ8IYS5 282 aa5.87□□□□□ -1.47
RNU4-47P-201ENST00000410876 CCDC88BA6NC98 1476 aa5.86□□□□□ -1.47
RNU4-47P-201ENST00000410876 KIF21AQ7Z4S6 1674 aa5.85□□□□□ -1.47
RNU4-47P-201ENST00000410876 IFT140Q96RY7 1462 aa5.83□□□□□ -1.48
RNU4-47P-201ENST00000410876 URB2Q14146 1524 aaKnown RBP5.81□□□□□ -1.48
RNU4-47P-201ENST00000410876 PRDM2Q13029 1718 aa5.78□□□□□ -1.48
RNU4-47P-201ENST00000410876 TOPBP1Q92547 1522 aa5.78□□□□□ -1.48
RNU4-47P-201ENST00000410876 DNMBPQ6XZF7 1577 aa5.77□□□□□ -1.49
RNU4-47P-201ENST00000410876 WDR97A6NE52 1622 aa5.77□□□□□ -1.49
RNU4-47P-201ENST00000410876 SOGA1O94964 1423 aa5.74□□□□□ -1.49
RNU4-47P-201ENST00000410876 POLA1P09884 1462 aaPredicted RBP5.72□□□□□ -1.49
RNU4-47P-201ENST00000410876 TARBP1Q13395 1621 aaKnown RBP5.71□□□□□ -1.5
RNU4-47P-201ENST00000410876 ZNF608Q9ULD9 1512 aaPredicted RBP5.71□□□□□ -1.5
RNU4-47P-201ENST00000410876 MAGI1Q96QZ7 1491 aaPredicted RBP5.71□□□□□ -1.5
RNU4-47P-201ENST00000410876 CHMP7Q8WUX9 453 aaPredicted RBP5.7□□□□□ -1.5
RNU4-47P-201ENST00000410876 WRNQ14191 1432 aaPredicted RBP eCLIP5.7□□□□□ -1.5
RNU4-47P-201ENST00000410876 AQRO60306 1485 aaKnown RBP eCLIP5.7□□□□□ -1.5
RNU4-47P-201ENST00000410876 GRIN2BQ13224 1484 aa5.7□□□□□ -1.5
RNU4-47P-201ENST00000410876 SUPT5HO00267 1087 aaKnown RBP5.68□□□□□ -1.5
RNU4-47P-201ENST00000410876 ABCA10Q8WWZ4 1543 aa5.68□□□□□ -1.5
RNU4-47P-201ENST00000410876 TDRD9Q8NDG6 1382 aaKnown RBP5.67□□□□□ -1.5
RNU4-47P-201ENST00000410876 SYNJ2O15056 1496 aa5.67□□□□□ -1.5
RNU4-47P-201ENST00000410876 FGD5Q6ZNL6 1462 aa5.67□□□□□ -1.5
RNU4-47P-201ENST00000410876 TRIM41Q8WV44 630 aa5.67□□□□□ -1.5
RNU4-47P-201ENST00000410876 CUX1P39880 1505 aa5.67□□□□□ -1.5
RNU4-47P-201ENST00000410876 EIF4G3O43432 1585 aaKnown RBP5.67□□□□□ -1.5
RNU4-47P-201ENST00000410876 GAPVD1Q14C86 1478 aa5.66□□□□□ -1.5
RNU4-47P-201ENST00000410876 FBLN2P98095 1184 aa5.66□□□□□ -1.5
RNU4-47P-201ENST00000410876 RAD54L2Q9Y4B4 1467 aa5.65□□□□□ -1.5
RNU4-47P-201ENST00000410876 ARHGEF11O15085 1522 aa5.64□□□□□ -1.51
RNU4-47P-201ENST00000410876 CYB5RLQ6IPT4 315 aa5.64□□□□□ -1.51
RNU4-47P-201ENST00000410876 SYNJ1O43426 1573 aa5.63□□□□□ -1.51
RNU4-47P-201ENST00000410876 FHAD1B1AJZ9 1412 aa5.63□□□□□ -1.51
RNU4-47P-201ENST00000410876 ERICH3Q5RHP9 1530 aa5.63□□□□□ -1.51
RNU4-47P-201ENST00000410876 TOP2BQ02880 1626 aa5.63□□□□□ -1.51
RNU4-47P-201ENST00000410876 SNAPC4Q5SXM2 1469 aa5.62□□□□□ -1.51
RNU4-47P-201ENST00000410876 RIMBP3CA6NJZ7 1639 aa5.62□□□□□ -1.51
RNU4-47P-201ENST00000410876 RIMBP3BA6NNM3 1639 aa5.62□□□□□ -1.51
RNU4-47P-201ENST00000410876 RIMBP3Q9UFD9 1639 aa5.62□□□□□ -1.51
RNU4-47P-201ENST00000410876 BIVM-ERCC5R4GMW8 1640 aa5.6□□□□□ -1.51
RNU4-47P-201ENST00000410876 CLASP1Q7Z460 1538 aa5.6□□□□□ -1.51
RNU4-47P-201ENST00000410876 NUP160Q12769 1436 aa5.6□□□□□ -1.51
RNU4-47P-201ENST00000410876 ABCA5Q8WWZ7 1642 aa5.59□□□□□ -1.51
RNU4-47P-201ENST00000410876 GRIN2AQ12879 1464 aa5.59□□□□□ -1.51
RNU4-47P-201ENST00000410876 JPH4Q96JJ6 628 aa5.58□□□□□ -1.52
RNU4-47P-201ENST00000410876 ARAP1Q96P48 1450 aa5.58□□□□□ -1.52
RNU4-47P-201ENST00000410876 KIF27Q86VH2 1401 aa5.57□□□□□ -1.52
RNU4-47P-201ENST00000410876 CHD1O14646 1710 aa5.57□□□□□ -1.52
RNU4-47P-201ENST00000410876 IGF1RP08069 1367 aa5.57□□□□□ -1.52
RNU4-47P-201ENST00000410876 TRHP20396 242 aaPredicted RBP5.55□□□□□ -1.52
RNU4-47P-201ENST00000410876 KIAA0586Q9BVV6 1533 aa5.54□□□□□ -1.52
RNU4-47P-201ENST00000410876 PBRM1Q86U86 1689 aa5.54□□□□□ -1.52
RNU4-47P-201ENST00000410876 NPM1P06748 294 aaKnown RBP eCLIP5.54□□□□□ -1.52
RNU4-47P-201ENST00000410876 ADAMTS12P58397 1594 aa5.53□□□□□ -1.52
RNU4-47P-201ENST00000410876 CARMIL1Q5VZK9 1371 aa5.53□□□□□ -1.52
RNU4-47P-201ENST00000410876 SHROOM2Q13796 1616 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms