RNA–Protein interactions for RNA: ENST00000409493.3

INO80B-202, Transcript of INO80 complex subunit B, humanhuman

TSL 5

Gene INO80B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80B-202ENST00000409493 NISCHQ9Y2I1 1504 aa28.44■■■□□ 2.14
INO80B-202ENST00000409493 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
INO80B-202ENST00000409493 ABCC9O60706 1549 aa25.27■■□□□ 1.64
INO80B-202ENST00000409493 RB1CC1Q8TDY2 1594 aa24.18■■□□□ 1.46
INO80B-202ENST00000409493 NACADO15069 1562 aa24.05■■□□□ 1.44
INO80B-202ENST00000409493 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
INO80B-202ENST00000409493 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
INO80B-202ENST00000409493 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.39
INO80B-202ENST00000409493 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
INO80B-202ENST00000409493 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
INO80B-202ENST00000409493 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
INO80B-202ENST00000409493 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
INO80B-202ENST00000409493 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.35
INO80B-202ENST00000409493 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
INO80B-202ENST00000409493 SHROOM4Q9ULL8 1493 aa23.21■■□□□ 1.31
INO80B-202ENST00000409493 CC2D2AQ9P2K1 1620 aa22.88■■□□□ 1.25
INO80B-202ENST00000409493 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
INO80B-202ENST00000409493 CECR2Q9BXF3 1484 aa22.75■■□□□ 1.23
INO80B-202ENST00000409493 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
INO80B-202ENST00000409493 NCAPD3P42695 1498 aa22.16■■□□□ 1.14
INO80B-202ENST00000409493 ATAD2BQ9ULI0 1458 aa22.12■■□□□ 1.13
INO80B-202ENST00000409493 SMARCA2P51531 1590 aa22.1■■□□□ 1.13
INO80B-202ENST00000409493 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.13
INO80B-202ENST00000409493 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
INO80B-202ENST00000409493 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
INO80B-202ENST00000409493 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
INO80B-202ENST00000409493 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
INO80B-202ENST00000409493 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
INO80B-202ENST00000409493 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
INO80B-202ENST00000409493 NESP48681 1621 aa21.76■■□□□ 1.07
INO80B-202ENST00000409493 CUX2O14529 1486 aa21.75■■□□□ 1.07
INO80B-202ENST00000409493 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
INO80B-202ENST00000409493 WIZO95785 1651 aa21.68■■□□□ 1.06
INO80B-202ENST00000409493 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
INO80B-202ENST00000409493 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
INO80B-202ENST00000409493 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
INO80B-202ENST00000409493 RSF1Q96T23 1441 aaPredicted RBP21.49■■□□□ 1.03
INO80B-202ENST00000409493 PDS5BQ9NTI5 1447 aa21.49■■□□□ 1.03
INO80B-202ENST00000409493 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
INO80B-202ENST00000409493 DNAJC5Q9H3Z4 198 aa21.46■■□□□ 1.03
INO80B-202ENST00000409493 TOP2AP11388 1531 aaKnown RBP21.43■■□□□ 1.02
INO80B-202ENST00000409493 MRC2Q9UBG0 1479 aa21.33■■□□□ 1.01
INO80B-202ENST00000409493 WDR62O43379 1518 aa21.3■■□□□ 1
INO80B-202ENST00000409493 CFTRP13569 1480 aa21.29■■□□□ 1
INO80B-202ENST00000409493 CEP164Q9UPV0 1460 aa21.27■■□□□ 1
INO80B-202ENST00000409493 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
INO80B-202ENST00000409493 PRDM2Q13029 1718 aa21.22■□□□□ 0.99
INO80B-202ENST00000409493 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
INO80B-202ENST00000409493 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
INO80B-202ENST00000409493 URB2Q14146 1524 aaKnown RBP21.09■□□□□ 0.97
INO80B-202ENST00000409493 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
INO80B-202ENST00000409493 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
INO80B-202ENST00000409493 IFT140Q96RY7 1462 aa20.84■□□□□ 0.93
INO80B-202ENST00000409493 ABCC8Q09428 1581 aa20.84■□□□□ 0.93
INO80B-202ENST00000409493 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
INO80B-202ENST00000409493 EIF4G3O43432 1585 aaKnown RBP20.74■□□□□ 0.91
INO80B-202ENST00000409493 TARBP1Q13395 1621 aaKnown RBP20.72■□□□□ 0.91
INO80B-202ENST00000409493 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
INO80B-202ENST00000409493 POLA1P09884 1462 aaPredicted RBP20.68■□□□□ 0.9
INO80B-202ENST00000409493 CUX1P39880 1505 aa20.59■□□□□ 0.89
INO80B-202ENST00000409493 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.881e-7■■■■□ 20.1
INO80B-202ENST00000409493 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
INO80B-202ENST00000409493 CHD1O14646 1710 aa20.57■□□□□ 0.88
INO80B-202ENST00000409493 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
INO80B-202ENST00000409493 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
INO80B-202ENST00000409493 TRIM41Q8WV44 630 aa20.55■□□□□ 0.88
INO80B-202ENST00000409493 SOGA1O94964 1423 aa20.53■□□□□ 0.88
INO80B-202ENST00000409493 RIMBP3CA6NJZ7 1639 aa20.51■□□□□ 0.87
INO80B-202ENST00000409493 RIMBP3BA6NNM3 1639 aa20.51■□□□□ 0.87
INO80B-202ENST00000409493 RIMBP3Q9UFD9 1639 aa20.51■□□□□ 0.87
INO80B-202ENST00000409493 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
INO80B-202ENST00000409493 ARHGEF11O15085 1522 aa20.44■□□□□ 0.86
INO80B-202ENST00000409493 SNAPC4Q5SXM2 1469 aa20.42■□□□□ 0.86
INO80B-202ENST00000409493 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
INO80B-202ENST00000409493 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
INO80B-202ENST00000409493 MAGI1Q96QZ7 1491 aaPredicted RBP20.38■□□□□ 0.85
INO80B-202ENST00000409493 ABCA5Q8WWZ7 1642 aa20.36■□□□□ 0.85
INO80B-202ENST00000409493 ABCA10Q8WWZ4 1543 aa20.36■□□□□ 0.85
INO80B-202ENST00000409493 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
INO80B-202ENST00000409493 FBLN2P98095 1184 aa20.35■□□□□ 0.85
INO80B-202ENST00000409493 TOP2BQ02880 1626 aa20.33■□□□□ 0.84
INO80B-202ENST00000409493 GAPVD1Q14C86 1478 aa20.32■□□□□ 0.84
INO80B-202ENST00000409493 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
INO80B-202ENST00000409493 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
INO80B-202ENST00000409493 SYNJ1O43426 1573 aa20.3■□□□□ 0.84
INO80B-202ENST00000409493 WRNQ14191 1432 aaPredicted RBP eCLIP20.27■□□□□ 0.84
INO80B-202ENST00000409493 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
INO80B-202ENST00000409493 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
INO80B-202ENST00000409493 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
INO80B-202ENST00000409493 CYB5RLQ6IPT4 315 aa20.17■□□□□ 0.82
INO80B-202ENST00000409493 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
INO80B-202ENST00000409493 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
INO80B-202ENST00000409493 CEP170Q5SW79 1584 aa20.08■□□□□ 0.8
INO80B-202ENST00000409493 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
INO80B-202ENST00000409493 NUP160Q12769 1436 aa20.06■□□□□ 0.8
INO80B-202ENST00000409493 SHROOM2Q13796 1616 aa20.01■□□□□ 0.79
INO80B-202ENST00000409493 ERCC6L2Q5T890 1561 aa19.98■□□□□ 0.79
INO80B-202ENST00000409493 RUSC2Q8N2Y8 1516 aa19.91■□□□□ 0.78
INO80B-202ENST00000409493 CUL7Q14999 1698 aa19.9■□□□□ 0.78
INO80B-202ENST00000409493 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms