RNA–Protein interactions for RNA: ENST00000408983.2

RBFOX2-206, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 3

Gene RBFOX2, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-206ENST00000408983 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
RBFOX2-206ENST00000408983 ABCC9O60706 1549 aa17.89■□□□□ 0.45
RBFOX2-206ENST00000408983 CCDC180Q9P1Z9 1646 aa17.53■□□□□ 0.4
RBFOX2-206ENST00000408983 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
RBFOX2-206ENST00000408983 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.28
RBFOX2-206ENST00000408983 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
RBFOX2-206ENST00000408983 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
RBFOX2-206ENST00000408983 NACADO15069 1562 aa16.6■□□□□ 0.25
RBFOX2-206ENST00000408983 UNC13AQ9UPW8 1703 aa16.53■□□□□ 0.24
RBFOX2-206ENST00000408983 BICRAQ9NZM4 1560 aa16.44■□□□□ 0.22
RBFOX2-206ENST00000408983 MYO15BQ96JP2 1530 aa16.24■□□□□ 0.19
RBFOX2-206ENST00000408983 ZCCHC6Q5VYS8 1495 aaKnown RBP16.22■□□□□ 0.19
RBFOX2-206ENST00000408983 SCRIBQ14160 1630 aa16.19■□□□□ 0.18
RBFOX2-206ENST00000408983 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.17
RBFOX2-206ENST00000408983 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
RBFOX2-206ENST00000408983 CECR2Q9BXF3 1484 aa16.04■□□□□ 0.16
RBFOX2-206ENST00000408983 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
RBFOX2-206ENST00000408983 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
RBFOX2-206ENST00000408983 DNAJC5Q9H3Z4 198 aa15.48■□□□□ 0.07
RBFOX2-206ENST00000408983 ATAD2BQ9ULI0 1458 aa15.39■□□□□ 0.05
RBFOX2-206ENST00000408983 NESP48681 1621 aa15.38■□□□□ 0.05
RBFOX2-206ENST00000408983 NCAPD3P42695 1498 aa15.37■□□□□ 0.05
RBFOX2-206ENST00000408983 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
RBFOX2-206ENST00000408983 SMARCA4P51532 1647 aa15.34■□□□□ 0.05
RBFOX2-206ENST00000408983 CUX2O14529 1486 aa15.26■□□□□ 0.03
RBFOX2-206ENST00000408983 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
RBFOX2-206ENST00000408983 HMGXB3Q12766 1538 aa15.23■□□□□ 0.03
RBFOX2-206ENST00000408983 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
RBFOX2-206ENST00000408983 MROH2BQ7Z745 1585 aa15.21■□□□□ 0.03
RBFOX2-206ENST00000408983 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
RBFOX2-206ENST00000408983 CHIC1Q5VXU3 224 aa15.15■□□□□ 0.02
RBFOX2-206ENST00000408983 THOC2Q8NI27 1593 aaKnown RBP15.12■□□□□ 0.01
RBFOX2-206ENST00000408983 KIF21AQ7Z4S6 1674 aa15.09■□□□□ 0.01
RBFOX2-206ENST00000408983 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
RBFOX2-206ENST00000408983 WIZO95785 1651 aa15.03■□□□□ -0
RBFOX2-206ENST00000408983 LAMC3Q9Y6N6 1575 aa15.02□□□□□ -0.01
RBFOX2-206ENST00000408983 AEBP2Q6ZN18 517 aaPredicted RBP14.96□□□□□ -0.01
RBFOX2-206ENST00000408983 CADPSQ9ULU8 1353 aa14.94□□□□□ -0.02
RBFOX2-206ENST00000408983 PDS5BQ9NTI5 1447 aa14.93□□□□□ -0.02
RBFOX2-206ENST00000408983 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
RBFOX2-206ENST00000408983 MRC2Q9UBG0 1479 aa14.89□□□□□ -0.03
RBFOX2-206ENST00000408983 WDR62O43379 1518 aa14.85□□□□□ -0.03
RBFOX2-206ENST00000408983 RSF1Q96T23 1441 aaPredicted RBP14.81□□□□□ -0.04
RBFOX2-206ENST00000408983 FANCD2Q9BXW9 1451 aa14.81□□□□□ -0.04
RBFOX2-206ENST00000408983 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
RBFOX2-206ENST00000408983 URB2Q14146 1524 aaKnown RBP14.75□□□□□ -0.05
RBFOX2-206ENST00000408983 CFTRP13569 1480 aa14.74□□□□□ -0.05
RBFOX2-206ENST00000408983 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
RBFOX2-206ENST00000408983 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
RBFOX2-206ENST00000408983 CCDC88BA6NC98 1476 aa14.63□□□□□ -0.07
RBFOX2-206ENST00000408983 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
RBFOX2-206ENST00000408983 PRDM2Q13029 1718 aa14.52□□□□□ -0.08
RBFOX2-206ENST00000408983 TOPBP1Q92547 1522 aa14.52□□□□□ -0.08
RBFOX2-206ENST00000408983 RIMBP3CA6NJZ7 1639 aa14.51□□□□□ -0.09
RBFOX2-206ENST00000408983 RIMBP3BA6NNM3 1639 aa14.51□□□□□ -0.09
RBFOX2-206ENST00000408983 RIMBP3Q9UFD9 1639 aa14.51□□□□□ -0.09
RBFOX2-206ENST00000408983 AQRO60306 1485 aaKnown RBP eCLIP14.47□□□□□ -0.09
RBFOX2-206ENST00000408983 IFT140Q96RY7 1462 aa14.47□□□□□ -0.09
RBFOX2-206ENST00000408983 EIF4G3O43432 1585 aaKnown RBP14.46□□□□□ -0.09
RBFOX2-206ENST00000408983 ARHGEF11O15085 1522 aa14.44□□□□□ -0.1
RBFOX2-206ENST00000408983 RAD54L2Q9Y4B4 1467 aa14.42□□□□□ -0.1
RBFOX2-206ENST00000408983 DNMBPQ6XZF7 1577 aa14.41□□□□□ -0.1
RBFOX2-206ENST00000408983 CHD1O14646 1710 aa14.4□□□□□ -0.1
RBFOX2-206ENST00000408983 TARBP1Q13395 1621 aaKnown RBP14.4□□□□□ -0.1
RBFOX2-206ENST00000408983 FBLN2P98095 1184 aa14.39□□□□□ -0.11
RBFOX2-206ENST00000408983 CYB5RLQ6IPT4 315 aa14.39□□□□□ -0.11
RBFOX2-206ENST00000408983 POLA1P09884 1462 aaPredicted RBP14.38□□□□□ -0.11
RBFOX2-206ENST00000408983 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
RBFOX2-206ENST00000408983 ARAP1Q96P48 1450 aa14.32□□□□□ -0.12
RBFOX2-206ENST00000408983 ABCC8Q09428 1581 aa14.29□□□□□ -0.12
RBFOX2-206ENST00000408983 SOGA1O94964 1423 aa14.28□□□□□ -0.12
RBFOX2-206ENST00000408983 CUX1P39880 1505 aa14.28□□□□□ -0.12
RBFOX2-206ENST00000408983 FGD5Q6ZNL6 1462 aa14.28□□□□□ -0.12
RBFOX2-206ENST00000408983 SNAPC4Q5SXM2 1469 aa14.27□□□□□ -0.12
RBFOX2-206ENST00000408983 TRHP20396 242 aaPredicted RBP14.24□□□□□ -0.13
RBFOX2-206ENST00000408983 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
RBFOX2-206ENST00000408983 CLASP1Q7Z460 1538 aa14.19□□□□□ -0.14
RBFOX2-206ENST00000408983 CHMP7Q8WUX9 453 aaPredicted RBP14.17□□□□□ -0.14
RBFOX2-206ENST00000408983 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
RBFOX2-206ENST00000408983 GRIN2BQ13224 1484 aa14.12□□□□□ -0.15
RBFOX2-206ENST00000408983 PBRM1Q86U86 1689 aa14.11□□□□□ -0.15
RBFOX2-206ENST00000408983 ERCC6L2Q5T890 1561 aa14.11□□□□□ -0.15
RBFOX2-206ENST00000408983 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
RBFOX2-206ENST00000408983 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
RBFOX2-206ENST00000408983 MAGI1Q96QZ7 1491 aaPredicted RBP14.1□□□□□ -0.15
RBFOX2-206ENST00000408983 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
RBFOX2-206ENST00000408983 ABCA5Q8WWZ7 1642 aa14.06□□□□□ -0.16
RBFOX2-206ENST00000408983 ABCA10Q8WWZ4 1543 aa14.04□□□□□ -0.16
RBFOX2-206ENST00000408983 CEP170Q5SW79 1584 aa14□□□□□ -0.17
RBFOX2-206ENST00000408983 GRIN2AQ12879 1464 aa13.99□□□□□ -0.17
RBFOX2-206ENST00000408983 ADAMTS12P58397 1594 aa13.98□□□□□ -0.17
RBFOX2-206ENST00000408983 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
RBFOX2-206ENST00000408983 TOP2BQ02880 1626 aa13.93□□□□□ -0.18
RBFOX2-206ENST00000408983 NUP160Q12769 1436 aa13.92□□□□□ -0.18
RBFOX2-206ENST00000408983 BIVM-ERCC5R4GMW8 1640 aa13.92□□□□□ -0.18
RBFOX2-206ENST00000408983 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
RBFOX2-206ENST00000408983 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
RBFOX2-206ENST00000408983 PRG4Q92954 1404 aaPredicted RBP13.85□□□□□ -0.19
RBFOX2-206ENST00000408983 ERICH3Q5RHP9 1530 aa13.81□□□□□ -0.2
RBFOX2-206ENST00000408983 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms