RNA–Protein interactions for RNA: ENST00000408749.1

RNU6ATAC-201, Transcript of RNA, U6atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU6ATAC, Length 126 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC-201ENST00000408749 NISCHQ9Y2I1 1504 aa10.01□□□□□ -0.81
RNU6ATAC-201ENST00000408749 ABCC9O60706 1549 aa9.44□□□□□ -0.9
RNU6ATAC-201ENST00000408749 CCDC180Q9P1Z9 1646 aa9.23□□□□□ -0.93
RNU6ATAC-201ENST00000408749 DNAJC5BQ9UF47 199 aa9.01□□□□□ -0.97
RNU6ATAC-201ENST00000408749 RB1CC1Q8TDY2 1594 aa8.93□□□□□ -0.98
RNU6ATAC-201ENST00000408749 NACADO15069 1562 aa8.77□□□□□ -1.01
RNU6ATAC-201ENST00000408749 UNC13AQ9UPW8 1703 aa8.68□□□□□ -1.02
RNU6ATAC-201ENST00000408749 PABPN1Q86U42 306 aaKnown RBP eCLIP8.67□□□□□ -1.02
RNU6ATAC-201ENST00000408749 DNAJC5Q9H3Z4 198 aa8.6□□□□□ -1.03
RNU6ATAC-201ENST00000408749 BICRAQ9NZM4 1560 aa8.58□□□□□ -1.04
RNU6ATAC-201ENST00000408749 DCAF8L2P0C7V8 631 aa8.56□□□□□ -1.04
RNU6ATAC-201ENST00000408749 CECR2Q9BXF3 1484 aa8.56□□□□□ -1.04
RNU6ATAC-201ENST00000408749 SHROOM4Q9ULL8 1493 aa8.56□□□□□ -1.04
RNU6ATAC-201ENST00000408749 CC2D2AQ9P2K1 1620 aa8.54□□□□□ -1.04
RNU6ATAC-201ENST00000408749 MYO15BQ96JP2 1530 aa8.53□□□□□ -1.04
RNU6ATAC-201ENST00000408749 EIF4G1Q04637 1599 aaKnown RBP8.44□□□□□ -1.06
RNU6ATAC-201ENST00000408749 CUX2O14529 1486 aa8.34□□□□□ -1.07
RNU6ATAC-201ENST00000408749 SCRIBQ14160 1630 aa8.32□□□□□ -1.08
RNU6ATAC-201ENST00000408749 DCAF1Q9Y4B6 1507 aa8.29□□□□□ -1.08
RNU6ATAC-201ENST00000408749 ERCC6Q03468 1493 aa8.25□□□□□ -1.09
RNU6ATAC-201ENST00000408749 ZCCHC6Q5VYS8 1495 aaKnown RBP8.24□□□□□ -1.09
RNU6ATAC-201ENST00000408749 TRIM41Q8WV44 630 aa8.13□□□□□ -1.11
RNU6ATAC-201ENST00000408749 NCAPD3P42695 1498 aa8.04□□□□□ -1.12
RNU6ATAC-201ENST00000408749 THOC2Q8NI27 1593 aaKnown RBP8.04□□□□□ -1.12
RNU6ATAC-201ENST00000408749 HMGXB3Q12766 1538 aa8.01□□□□□ -1.13
RNU6ATAC-201ENST00000408749 SMARCA2P51531 1590 aa8□□□□□ -1.13
RNU6ATAC-201ENST00000408749 LAMC3Q9Y6N6 1575 aa7.98□□□□□ -1.13
RNU6ATAC-201ENST00000408749 NESP48681 1621 aa7.98□□□□□ -1.13
RNU6ATAC-201ENST00000408749 ATAD2BQ9ULI0 1458 aa7.96□□□□□ -1.13
RNU6ATAC-201ENST00000408749 KIF21AQ7Z4S6 1674 aa7.95□□□□□ -1.14
RNU6ATAC-201ENST00000408749 BAZ1AQ9NRL2 1556 aaPredicted RBP7.94□□□□□ -1.14
RNU6ATAC-201ENST00000408749 PDS5BQ9NTI5 1447 aa7.93□□□□□ -1.14
RNU6ATAC-201ENST00000408749 BAZ1BQ9UIG0 1483 aaKnown RBP7.92□□□□□ -1.14
RNU6ATAC-201ENST00000408749 SMARCA4P51532 1647 aa7.92□□□□□ -1.14
RNU6ATAC-201ENST00000408749 MRC2Q9UBG0 1479 aa7.87□□□□□ -1.15
RNU6ATAC-201ENST00000408749 WDR62O43379 1518 aa7.86□□□□□ -1.15
RNU6ATAC-201ENST00000408749 OSCARQ8IYS5 282 aa7.84□□□□□ -1.15
RNU6ATAC-201ENST00000408749 PEG3Q9GZU2 1588 aa7.84□□□□□ -1.15
RNU6ATAC-201ENST00000408749 RIMBP3CA6NJZ7 1639 aa7.81□□□□□ -1.16
RNU6ATAC-201ENST00000408749 RIMBP3BA6NNM3 1639 aa7.81□□□□□ -1.16
RNU6ATAC-201ENST00000408749 RIMBP3Q9UFD9 1639 aa7.81□□□□□ -1.16
RNU6ATAC-201ENST00000408749 AEBP2Q6ZN18 517 aaPredicted RBP7.8□□□□□ -1.16
RNU6ATAC-201ENST00000408749 CEP164Q9UPV0 1460 aa7.8□□□□□ -1.16
RNU6ATAC-201ENST00000408749 CADPSQ9ULU8 1353 aa7.77□□□□□ -1.17
RNU6ATAC-201ENST00000408749 ARHGEF11O15085 1522 aa7.74□□□□□ -1.17
RNU6ATAC-201ENST00000408749 TRHP20396 242 aaPredicted RBP7.73□□□□□ -1.17
RNU6ATAC-201ENST00000408749 FANCD2Q9BXW9 1451 aa7.71□□□□□ -1.18
RNU6ATAC-201ENST00000408749 MROH2BQ7Z745 1585 aa7.67□□□□□ -1.18
RNU6ATAC-201ENST00000408749 CYB5RLQ6IPT4 315 aa7.65□□□□□ -1.18
RNU6ATAC-201ENST00000408749 PRDM2Q13029 1718 aa7.64□□□□□ -1.19
RNU6ATAC-201ENST00000408749 URB2Q14146 1524 aaKnown RBP7.63□□□□□ -1.19
RNU6ATAC-201ENST00000408749 IFT140Q96RY7 1462 aa7.63□□□□□ -1.19
RNU6ATAC-201ENST00000408749 CFTRP13569 1480 aa7.62□□□□□ -1.19
RNU6ATAC-201ENST00000408749 ARAP1Q96P48 1450 aa7.62□□□□□ -1.19
RNU6ATAC-201ENST00000408749 RSF1Q96T23 1441 aaPredicted RBP7.61□□□□□ -1.19
RNU6ATAC-201ENST00000408749 CHD1O14646 1710 aa7.61□□□□□ -1.19
RNU6ATAC-201ENST00000408749 EIF4G3O43432 1585 aaKnown RBP7.61□□□□□ -1.19
RNU6ATAC-201ENST00000408749 WIZO95785 1651 aa7.6□□□□□ -1.19
RNU6ATAC-201ENST00000408749 ZNF608Q9ULD9 1512 aaPredicted RBP7.57□□□□□ -1.2
RNU6ATAC-201ENST00000408749 ABCC8Q09428 1581 aa7.55□□□□□ -1.2
RNU6ATAC-201ENST00000408749 TOP2AP11388 1531 aaKnown RBP7.52□□□□□ -1.2
RNU6ATAC-201ENST00000408749 FBLN2P98095 1184 aa7.52□□□□□ -1.21
RNU6ATAC-201ENST00000408749 TOPBP1Q92547 1522 aa7.52□□□□□ -1.21
RNU6ATAC-201ENST00000408749 SYNJ1O43426 1573 aa7.51□□□□□ -1.21
RNU6ATAC-201ENST00000408749 DNMBPQ6XZF7 1577 aa7.5□□□□□ -1.21
RNU6ATAC-201ENST00000408749 CLASP1Q7Z460 1538 aa7.49□□□□□ -1.21
RNU6ATAC-201ENST00000408749 WDR97A6NE52 1622 aa7.48□□□□□ -1.21
RNU6ATAC-201ENST00000408749 TARBP1Q13395 1621 aaKnown RBP7.48□□□□□ -1.21
RNU6ATAC-201ENST00000408749 AQRO60306 1485 aaKnown RBP eCLIP7.47□□□□□ -1.21not detected■■■■■ 37.5
RNU6ATAC-201ENST00000408749 GAPVD1Q14C86 1478 aa7.43□□□□□ -1.22
RNU6ATAC-201ENST00000408749 SNAPC4Q5SXM2 1469 aa7.43□□□□□ -1.22
RNU6ATAC-201ENST00000408749 MAGI1Q96QZ7 1491 aaPredicted RBP7.43□□□□□ -1.22
RNU6ATAC-201ENST00000408749 CHMP7Q8WUX9 453 aaPredicted RBP7.42□□□□□ -1.22
RNU6ATAC-201ENST00000408749 POLA1P09884 1462 aaPredicted RBP7.42□□□□□ -1.22
RNU6ATAC-201ENST00000408749 ILDR1Q86SU0 546 aaPredicted RBP7.41□□□□□ -1.22
RNU6ATAC-201ENST00000408749 SYNJ2O15056 1496 aa7.4□□□□□ -1.22
RNU6ATAC-201ENST00000408749 GRIN2BQ13224 1484 aa7.38□□□□□ -1.23
RNU6ATAC-201ENST00000408749 PBRM1Q86U86 1689 aa7.38□□□□□ -1.23
RNU6ATAC-201ENST00000408749 CCDC88BA6NC98 1476 aa7.37□□□□□ -1.23
RNU6ATAC-201ENST00000408749 SOGA1O94964 1423 aa7.37□□□□□ -1.23
RNU6ATAC-201ENST00000408749 KIF13AQ9H1H9 1805 aa7.37□□□□□ -1.23
RNU6ATAC-201ENST00000408749 TDRD9Q8NDG6 1382 aaKnown RBP7.36□□□□□ -1.23
RNU6ATAC-201ENST00000408749 RAD54L2Q9Y4B4 1467 aa7.36□□□□□ -1.23
RNU6ATAC-201ENST00000408749 KDM6BO15054 1643 aa7.34□□□□□ -1.24
RNU6ATAC-201ENST00000408749 FGD5Q6ZNL6 1462 aa7.33□□□□□ -1.24
RNU6ATAC-201ENST00000408749 ERCC6L2Q5T890 1561 aa7.31□□□□□ -1.24
RNU6ATAC-201ENST00000408749 CEP170Q5SW79 1584 aa7.3□□□□□ -1.24
RNU6ATAC-201ENST00000408749 GRIN2AQ12879 1464 aa7.29□□□□□ -1.24
RNU6ATAC-201ENST00000408749 SHROOM2Q13796 1616 aa7.28□□□□□ -1.24
RNU6ATAC-201ENST00000408749 ABCC10Q5T3U5 1492 aa7.28□□□□□ -1.24
RNU6ATAC-201ENST00000408749 ABCA5Q8WWZ7 1642 aa7.27□□□□□ -1.25
RNU6ATAC-201ENST00000408749 NPM1P06748 294 aaKnown RBP eCLIP7.27□□□□□ -1.25
RNU6ATAC-201ENST00000408749 DIP2BQ9P265 1576 aa7.27□□□□□ -1.25
RNU6ATAC-201ENST00000408749 MAPKBP1O60336 1514 aa7.27□□□□□ -1.25
RNU6ATAC-201ENST00000408749 KDM4FA0A1W2PPD8 638 aa7.26□□□□□ -1.25
RNU6ATAC-201ENST00000408749 FAM69CQ0P6D2 419 aa7.26□□□□□ -1.25
RNU6ATAC-201ENST00000408749 ADAMTS12P58397 1594 aa7.25□□□□□ -1.25
RNU6ATAC-201ENST00000408749 CUX1P39880 1505 aa7.25□□□□□ -1.25
RNU6ATAC-201ENST00000408749 NUP160Q12769 1436 aa7.25□□□□□ -1.25
RNU6ATAC-201ENST00000408749 HECW2Q9P2P5 1572 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms