RNA–Protein interactions for RNA: ENST00000408028.6

SLC8A1-209, Transcript of solute carrier family 8 member A1, humanhuman

TSL 5 BASIC

Gene SLC8A1, Length 2,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-209ENST00000408028 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
SLC8A1-209ENST00000408028 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.53
SLC8A1-209ENST00000408028 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
SLC8A1-209ENST00000408028 DCAF1Q9Y4B6 1507 aa17.3■□□□□ 0.36
SLC8A1-209ENST00000408028 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
SLC8A1-209ENST00000408028 ABCC9O60706 1549 aa17.22■□□□□ 0.35
SLC8A1-209ENST00000408028 NACADO15069 1562 aa17.12■□□□□ 0.33
SLC8A1-209ENST00000408028 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
SLC8A1-209ENST00000408028 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
SLC8A1-209ENST00000408028 DCAF8L2P0C7V8 631 aa16.57■□□□□ 0.24
SLC8A1-209ENST00000408028 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
SLC8A1-209ENST00000408028 SCRIBQ14160 1630 aa16.49■□□□□ 0.23
SLC8A1-209ENST00000408028 BICRAQ9NZM4 1560 aa16.42■□□□□ 0.22
SLC8A1-209ENST00000408028 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
SLC8A1-209ENST00000408028 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
SLC8A1-209ENST00000408028 SMARCA4P51532 1647 aa15.95■□□□□ 0.14
SLC8A1-209ENST00000408028 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
SLC8A1-209ENST00000408028 PEG3Q9GZU2 1588 aa15.94■□□□□ 0.14
SLC8A1-209ENST00000408028 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
SLC8A1-209ENST00000408028 SMARCA2P51531 1590 aa15.82■□□□□ 0.12
SLC8A1-209ENST00000408028 MROH2BQ7Z745 1585 aa15.81■□□□□ 0.12
SLC8A1-209ENST00000408028 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.11
SLC8A1-209ENST00000408028 HMGXB3Q12766 1538 aa15.77■□□□□ 0.11
SLC8A1-209ENST00000408028 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
SLC8A1-209ENST00000408028 NCAPD3P42695 1498 aa15.73■□□□□ 0.11
SLC8A1-209ENST00000408028 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
SLC8A1-209ENST00000408028 WIZO95785 1651 aa15.65■□□□□ 0.1
SLC8A1-209ENST00000408028 TOP2AP11388 1531 aaKnown RBP15.64■□□□□ 0.09
SLC8A1-209ENST00000408028 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
SLC8A1-209ENST00000408028 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
SLC8A1-209ENST00000408028 PRDM2Q13029 1718 aa15.33■□□□□ 0.04
SLC8A1-209ENST00000408028 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
SLC8A1-209ENST00000408028 LAMC3Q9Y6N6 1575 aa15.3■□□□□ 0.04
SLC8A1-209ENST00000408028 SUPT5HO00267 1087 aaKnown RBP15.29■□□□□ 0.04
SLC8A1-209ENST00000408028 CFTRP13569 1480 aa15.25■□□□□ 0.03
SLC8A1-209ENST00000408028 CADPSQ9ULU8 1353 aa15.2■□□□□ 0.02
SLC8A1-209ENST00000408028 PDS5BQ9NTI5 1447 aa15.08■□□□□ 0
SLC8A1-209ENST00000408028 NESP48681 1621 aa15.01□□□□□ -0.01
SLC8A1-209ENST00000408028 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
SLC8A1-209ENST00000408028 KIF21AQ7Z4S6 1674 aa15□□□□□ -0.01
SLC8A1-209ENST00000408028 ABCC8Q09428 1581 aa14.99□□□□□ -0.01
SLC8A1-209ENST00000408028 CEP164Q9UPV0 1460 aa14.99□□□□□ -0.01
SLC8A1-209ENST00000408028 BIVM-ERCC5R4GMW8 1640 aa14.95□□□□□ -0.02
SLC8A1-209ENST00000408028 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
SLC8A1-209ENST00000408028 WDR62O43379 1518 aa14.93□□□□□ -0.02
SLC8A1-209ENST00000408028 DNMBPQ6XZF7 1577 aa14.93□□□□□ -0.02
SLC8A1-209ENST00000408028 MRC2Q9UBG0 1479 aa14.92□□□□□ -0.02
SLC8A1-209ENST00000408028 TOP2BQ02880 1626 aa14.9□□□□□ -0.02
SLC8A1-209ENST00000408028 ERCC6Q03468 1493 aa14.86□□□□□ -0.03
SLC8A1-209ENST00000408028 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
SLC8A1-209ENST00000408028 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
SLC8A1-209ENST00000408028 CUX1P39880 1505 aa14.84□□□□□ -0.03
SLC8A1-209ENST00000408028 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
SLC8A1-209ENST00000408028 TOPBP1Q92547 1522 aa14.83□□□□□ -0.03
SLC8A1-209ENST00000408028 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
SLC8A1-209ENST00000408028 CUX2O14529 1486 aa14.8□□□□□ -0.04
SLC8A1-209ENST00000408028 POLA1P09884 1462 aaPredicted RBP14.72□□□□□ -0.05
SLC8A1-209ENST00000408028 TARBP1Q13395 1621 aaKnown RBP14.72□□□□□ -0.05
SLC8A1-209ENST00000408028 IFT140Q96RY7 1462 aa14.71□□□□□ -0.05
SLC8A1-209ENST00000408028 FGD5Q6ZNL6 1462 aa14.71□□□□□ -0.05
SLC8A1-209ENST00000408028 ABCA10Q8WWZ4 1543 aa14.69□□□□□ -0.06
SLC8A1-209ENST00000408028 CHIC1Q5VXU3 224 aa14.64□□□□□ -0.07
SLC8A1-209ENST00000408028 EEA1Q15075 1411 aa14.63□□□□□ -0.07
SLC8A1-209ENST00000408028 ABCA5Q8WWZ7 1642 aa14.63□□□□□ -0.07
SLC8A1-209ENST00000408028 SOGA1O94964 1423 aa14.61□□□□□ -0.07
SLC8A1-209ENST00000408028 TRIM41Q8WV44 630 aa14.57□□□□□ -0.08
SLC8A1-209ENST00000408028 ERICH3Q5RHP9 1530 aa14.56□□□□□ -0.08
SLC8A1-209ENST00000408028 EIF4G3O43432 1585 aaKnown RBP14.54□□□□□ -0.08
SLC8A1-209ENST00000408028 KIF27Q86VH2 1401 aa14.54□□□□□ -0.08
SLC8A1-209ENST00000408028 PBRM1Q86U86 1689 aa14.54□□□□□ -0.08
SLC8A1-209ENST00000408028 RAD54L2Q9Y4B4 1467 aa14.53□□□□□ -0.08
SLC8A1-209ENST00000408028 CUL7Q14999 1698 aa14.53□□□□□ -0.08
SLC8A1-209ENST00000408028 GAPVD1Q14C86 1478 aa14.49□□□□□ -0.09
SLC8A1-209ENST00000408028 GRIN2BQ13224 1484 aa14.49□□□□□ -0.09
SLC8A1-209ENST00000408028 MAGI1Q96QZ7 1491 aaPredicted RBP14.48□□□□□ -0.09
SLC8A1-209ENST00000408028 KIF21BO75037 1637 aa14.44□□□□□ -0.1
SLC8A1-209ENST00000408028 ZNF608Q9ULD9 1512 aaPredicted RBP14.44□□□□□ -0.1
SLC8A1-209ENST00000408028 ADAMTS12P58397 1594 aa14.44□□□□□ -0.1
SLC8A1-209ENST00000408028 PRXQ9BXM0 1461 aa14.4□□□□□ -0.1
SLC8A1-209ENST00000408028 IGF1RP08069 1367 aa14.39□□□□□ -0.11
SLC8A1-209ENST00000408028 FHAD1B1AJZ9 1412 aa14.39□□□□□ -0.11
SLC8A1-209ENST00000408028 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
SLC8A1-209ENST00000408028 TDRD9Q8NDG6 1382 aaKnown RBP14.37□□□□□ -0.11
SLC8A1-209ENST00000408028 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
SLC8A1-209ENST00000408028 RUSC2Q8N2Y8 1516 aa14.35□□□□□ -0.11
SLC8A1-209ENST00000408028 SNAPC4Q5SXM2 1469 aa14.34□□□□□ -0.11
SLC8A1-209ENST00000408028 RAPGEF2Q9Y4G8 1499 aa14.33□□□□□ -0.12
SLC8A1-209ENST00000408028 CSRNP3Q8WYN3 585 aa14.31□□□□□ -0.12
SLC8A1-209ENST00000408028 CARMIL1Q5VZK9 1371 aa14.3□□□□□ -0.12
SLC8A1-209ENST00000408028 GRIN2AQ12879 1464 aa14.29□□□□□ -0.12
SLC8A1-209ENST00000408028 GOLGA3Q08378 1498 aa14.28□□□□□ -0.12
SLC8A1-209ENST00000408028 CHD1O14646 1710 aa14.27□□□□□ -0.12
SLC8A1-209ENST00000408028 CTTNBP2Q8WZ74 1663 aa14.27□□□□□ -0.13
SLC8A1-209ENST00000408028 NUP160Q12769 1436 aa14.26□□□□□ -0.13
SLC8A1-209ENST00000408028 CLASP1Q7Z460 1538 aa14.21□□□□□ -0.13
SLC8A1-209ENST00000408028 CEP170Q5SW79 1584 aa14.2□□□□□ -0.14
SLC8A1-209ENST00000408028 SHROOM2Q13796 1616 aa14.19□□□□□ -0.14
SLC8A1-209ENST00000408028 KIAA0586Q9BVV6 1533 aa14.19□□□□□ -0.14
SLC8A1-209ENST00000408028 IQGAP2Q13576 1575 aa14.16□□□□□ -0.14
SLC8A1-209ENST00000408028 TNIKQ9UKE5 1360 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms