RNA–Protein interactions for RNA: ENST00000407997.3

APOBEC3G-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3G, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3G, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3G-201ENST00000407997 NISCHQ9Y2I1 1504 aa23.04■■□□□ 1.28
APOBEC3G-201ENST00000407997 AEBP2Q6ZN18 517 aaPredicted RBP21.33■■□□□ 1.01
APOBEC3G-201ENST00000407997 CCDC180Q9P1Z9 1646 aa20.68■□□□□ 0.9
APOBEC3G-201ENST00000407997 ABCC9O60706 1549 aa20.62■□□□□ 0.89
APOBEC3G-201ENST00000407997 CHIC1Q5VXU3 224 aa20.34■□□□□ 0.85
APOBEC3G-201ENST00000407997 POTEDQ86YR6 584 aa19.75■□□□□ 0.75
APOBEC3G-201ENST00000407997 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
APOBEC3G-201ENST00000407997 NACADO15069 1562 aa19.59■□□□□ 0.73
APOBEC3G-201ENST00000407997 DCAF8L2P0C7V8 631 aa19.45■□□□□ 0.7
APOBEC3G-201ENST00000407997 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
APOBEC3G-201ENST00000407997 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
APOBEC3G-201ENST00000407997 PABPN1Q86U42 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
APOBEC3G-201ENST00000407997 ZCCHC6Q5VYS8 1495 aaKnown RBP19.1■□□□□ 0.65
APOBEC3G-201ENST00000407997 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
APOBEC3G-201ENST00000407997 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
APOBEC3G-201ENST00000407997 BICRAQ9NZM4 1560 aa19.03■□□□□ 0.64
APOBEC3G-201ENST00000407997 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
APOBEC3G-201ENST00000407997 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
APOBEC3G-201ENST00000407997 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
APOBEC3G-201ENST00000407997 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
APOBEC3G-201ENST00000407997 CECR2Q9BXF3 1484 aa18.62■□□□□ 0.57
APOBEC3G-201ENST00000407997 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
APOBEC3G-201ENST00000407997 PHF23Q9BUL5 403 aaPredicted RBP18.21■□□□□ 0.51
APOBEC3G-201ENST00000407997 NCAPD3P42695 1498 aa18.09■□□□□ 0.49
APOBEC3G-201ENST00000407997 ATAD2BQ9ULI0 1458 aa17.99■□□□□ 0.47
APOBEC3G-201ENST00000407997 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
APOBEC3G-201ENST00000407997 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
APOBEC3G-201ENST00000407997 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
APOBEC3G-201ENST00000407997 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
APOBEC3G-201ENST00000407997 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
APOBEC3G-201ENST00000407997 CUX2O14529 1486 aa17.86■□□□□ 0.45
APOBEC3G-201ENST00000407997 BAZ1BQ9UIG0 1483 aaKnown RBP17.84■□□□□ 0.45
APOBEC3G-201ENST00000407997 DNAJC5Q9H3Z4 198 aa17.82■□□□□ 0.44
APOBEC3G-201ENST00000407997 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
APOBEC3G-201ENST00000407997 MROH2BQ7Z745 1585 aa17.71■□□□□ 0.43
APOBEC3G-201ENST00000407997 NESP48681 1621 aa17.68■□□□□ 0.42
APOBEC3G-201ENST00000407997 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
APOBEC3G-201ENST00000407997 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
APOBEC3G-201ENST00000407997 FOXD1Q16676 465 aa17.56■□□□□ 0.4
APOBEC3G-201ENST00000407997 CADPSQ9ULU8 1353 aa17.54■□□□□ 0.4
APOBEC3G-201ENST00000407997 THOC2Q8NI27 1593 aaKnown RBP17.52■□□□□ 0.39
APOBEC3G-201ENST00000407997 WIZO95785 1651 aa17.46■□□□□ 0.39
APOBEC3G-201ENST00000407997 KIF21AQ7Z4S6 1674 aa17.43■□□□□ 0.38
APOBEC3G-201ENST00000407997 MSH5O43196 834 aa17.42■□□□□ 0.38
APOBEC3G-201ENST00000407997 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
APOBEC3G-201ENST00000407997 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.37
APOBEC3G-201ENST00000407997 WDR62O43379 1518 aa17.34■□□□□ 0.37
APOBEC3G-201ENST00000407997 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
APOBEC3G-201ENST00000407997 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
APOBEC3G-201ENST00000407997 CFTRP13569 1480 aa17.32■□□□□ 0.36
APOBEC3G-201ENST00000407997 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
APOBEC3G-201ENST00000407997 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
APOBEC3G-201ENST00000407997 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
APOBEC3G-201ENST00000407997 SUPT5HO00267 1087 aaKnown RBP17.08■□□□□ 0.33
APOBEC3G-201ENST00000407997 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
APOBEC3G-201ENST00000407997 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
APOBEC3G-201ENST00000407997 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
APOBEC3G-201ENST00000407997 IFT140Q96RY7 1462 aa17.02■□□□□ 0.31
APOBEC3G-201ENST00000407997 TRIM41Q8WV44 630 aa17■□□□□ 0.31
APOBEC3G-201ENST00000407997 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
APOBEC3G-201ENST00000407997 DNMBPQ6XZF7 1577 aa16.92■□□□□ 0.3
APOBEC3G-201ENST00000407997 ZNF608Q9ULD9 1512 aaPredicted RBP16.89■□□□□ 0.29
APOBEC3G-201ENST00000407997 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
APOBEC3G-201ENST00000407997 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
APOBEC3G-201ENST00000407997 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
APOBEC3G-201ENST00000407997 AQRO60306 1485 aaKnown RBP eCLIP16.76■□□□□ 0.27
APOBEC3G-201ENST00000407997 SOGA1O94964 1423 aa16.75■□□□□ 0.27
APOBEC3G-201ENST00000407997 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
APOBEC3G-201ENST00000407997 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
APOBEC3G-201ENST00000407997 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
APOBEC3G-201ENST00000407997 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
APOBEC3G-201ENST00000407997 ARHGEF11O15085 1522 aa16.71■□□□□ 0.27
APOBEC3G-201ENST00000407997 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
APOBEC3G-201ENST00000407997 FBLN2P98095 1184 aa16.7■□□□□ 0.26
APOBEC3G-201ENST00000407997 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
APOBEC3G-201ENST00000407997 FGD5Q6ZNL6 1462 aa16.68■□□□□ 0.26
APOBEC3G-201ENST00000407997 CUX1P39880 1505 aa16.64■□□□□ 0.25
APOBEC3G-201ENST00000407997 CHD1O14646 1710 aa16.63■□□□□ 0.25
APOBEC3G-201ENST00000407997 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
APOBEC3G-201ENST00000407997 MAGI1Q96QZ7 1491 aaPredicted RBP16.62■□□□□ 0.25
APOBEC3G-201ENST00000407997 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
APOBEC3G-201ENST00000407997 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
APOBEC3G-201ENST00000407997 CYB5RLQ6IPT4 315 aa16.61■□□□□ 0.25
APOBEC3G-201ENST00000407997 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
APOBEC3G-201ENST00000407997 SYNJ2O15056 1496 aa16.55■□□□□ 0.24
APOBEC3G-201ENST00000407997 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
APOBEC3G-201ENST00000407997 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
APOBEC3G-201ENST00000407997 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
APOBEC3G-201ENST00000407997 CLASP1Q7Z460 1538 aa16.51■□□□□ 0.23
APOBEC3G-201ENST00000407997 WRNQ14191 1432 aaPredicted RBP eCLIP16.5■□□□□ 0.23
APOBEC3G-201ENST00000407997 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
APOBEC3G-201ENST00000407997 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
APOBEC3G-201ENST00000407997 PBRM1Q86U86 1689 aa16.44■□□□□ 0.22
APOBEC3G-201ENST00000407997 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
APOBEC3G-201ENST00000407997 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
APOBEC3G-201ENST00000407997 GRIN2AQ12879 1464 aa16.37■□□□□ 0.21
APOBEC3G-201ENST00000407997 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
APOBEC3G-201ENST00000407997 ADAMTS12P58397 1594 aa16.33■□□□□ 0.21
APOBEC3G-201ENST00000407997 ERICH3Q5RHP9 1530 aa16.33■□□□□ 0.2
APOBEC3G-201ENST00000407997 NUP160Q12769 1436 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms