RNA–Protein interactions for RNA: ENST00000407122.5

CLHC1-204, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLHC1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-204ENST00000407122 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
CLHC1-204ENST00000407122 AEBP2Q6ZN18 517 aaPredicted RBP16.36■□□□□ 0.21
CLHC1-204ENST00000407122 CHIC1Q5VXU3 224 aa15.92■□□□□ 0.14
CLHC1-204ENST00000407122 ABCC9O60706 1549 aa15.61■□□□□ 0.09
CLHC1-204ENST00000407122 CCDC180Q9P1Z9 1646 aa15.41■□□□□ 0.06
CLHC1-204ENST00000407122 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
CLHC1-204ENST00000407122 RB1CC1Q8TDY2 1594 aa14.75□□□□□ -0.05
CLHC1-204ENST00000407122 NACADO15069 1562 aa14.59□□□□□ -0.07
CLHC1-204ENST00000407122 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
CLHC1-204ENST00000407122 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.09
CLHC1-204ENST00000407122 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
CLHC1-204ENST00000407122 BICRAQ9NZM4 1560 aa14.36□□□□□ -0.11
CLHC1-204ENST00000407122 MYO15BQ96JP2 1530 aa14.31□□□□□ -0.12
CLHC1-204ENST00000407122 PHF23Q9BUL5 403 aaPredicted RBP14.11□□□□□ -0.15
CLHC1-204ENST00000407122 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
CLHC1-204ENST00000407122 CC2D2AQ9P2K1 1620 aa14.1□□□□□ -0.15
CLHC1-204ENST00000407122 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
CLHC1-204ENST00000407122 CECR2Q9BXF3 1484 aa14.07□□□□□ -0.16
CLHC1-204ENST00000407122 DCAF1Q9Y4B6 1507 aa14.06□□□□□ -0.16
CLHC1-204ENST00000407122 SCRIBQ14160 1630 aa14.05□□□□□ -0.16
CLHC1-204ENST00000407122 EIF4G1Q04637 1599 aaKnown RBP14.01□□□□□ -0.17
CLHC1-204ENST00000407122 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
CLHC1-204ENST00000407122 SENP3Q9H4L4 574 aaPredicted RBP13.7□□□□□ -0.22
CLHC1-204ENST00000407122 CUX2O14529 1486 aa13.51□□□□□ -0.25
CLHC1-204ENST00000407122 NCAPD3P42695 1498 aa13.47□□□□□ -0.25
CLHC1-204ENST00000407122 ERCC6Q03468 1493 aa13.46□□□□□ -0.25
CLHC1-204ENST00000407122 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
CLHC1-204ENST00000407122 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
CLHC1-204ENST00000407122 NESP48681 1621 aa13.37□□□□□ -0.27
CLHC1-204ENST00000407122 HMGXB3Q12766 1538 aa13.36□□□□□ -0.27
CLHC1-204ENST00000407122 SMARCA2P51531 1590 aa13.35□□□□□ -0.27
CLHC1-204ENST00000407122 THOC2Q8NI27 1593 aaKnown RBP13.27□□□□□ -0.28
CLHC1-204ENST00000407122 BAZ1BQ9UIG0 1483 aaKnown RBP13.27□□□□□ -0.28
CLHC1-204ENST00000407122 BAZ1AQ9NRL2 1556 aaPredicted RBP13.25□□□□□ -0.29
CLHC1-204ENST00000407122 PEG3Q9GZU2 1588 aa13.23□□□□□ -0.29
CLHC1-204ENST00000407122 LAMC3Q9Y6N6 1575 aa13.21□□□□□ -0.29
CLHC1-204ENST00000407122 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.3
CLHC1-204ENST00000407122 MROH2BQ7Z745 1585 aa13.16□□□□□ -0.3
CLHC1-204ENST00000407122 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
CLHC1-204ENST00000407122 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
CLHC1-204ENST00000407122 CADPSQ9ULU8 1353 aa13.05□□□□□ -0.32
CLHC1-204ENST00000407122 MRC2Q9UBG0 1479 aa13.03□□□□□ -0.32
CLHC1-204ENST00000407122 WDR62O43379 1518 aa13.03□□□□□ -0.32
CLHC1-204ENST00000407122 WIZO95785 1651 aa13.01□□□□□ -0.33
CLHC1-204ENST00000407122 CEP164Q9UPV0 1460 aa12.95□□□□□ -0.34
CLHC1-204ENST00000407122 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
CLHC1-204ENST00000407122 PLPPR3Q6T4P5 718 aa12.9□□□□□ -0.34
CLHC1-204ENST00000407122 CFTRP13569 1480 aa12.87□□□□□ -0.35
CLHC1-204ENST00000407122 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
CLHC1-204ENST00000407122 OSCARQ8IYS5 282 aa12.83□□□□□ -0.35
CLHC1-204ENST00000407122 FOXD1Q16676 465 aa12.82□□□□□ -0.36
CLHC1-204ENST00000407122 TOP2AP11388 1531 aaKnown RBP12.8□□□□□ -0.36
CLHC1-204ENST00000407122 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
CLHC1-204ENST00000407122 PRDM2Q13029 1718 aa12.77□□□□□ -0.37
CLHC1-204ENST00000407122 RIMBP3CA6NJZ7 1639 aa12.75□□□□□ -0.37
CLHC1-204ENST00000407122 RIMBP3BA6NNM3 1639 aa12.75□□□□□ -0.37
CLHC1-204ENST00000407122 RIMBP3Q9UFD9 1639 aa12.75□□□□□ -0.37
CLHC1-204ENST00000407122 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
CLHC1-204ENST00000407122 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
CLHC1-204ENST00000407122 ARHGEF11O15085 1522 aa12.68□□□□□ -0.38
CLHC1-204ENST00000407122 TOPBP1Q92547 1522 aa12.66□□□□□ -0.38
CLHC1-204ENST00000407122 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
CLHC1-204ENST00000407122 EIF4G3O43432 1585 aaKnown RBP12.65□□□□□ -0.38
CLHC1-204ENST00000407122 CHD1O14646 1710 aa12.61□□□□□ -0.39
CLHC1-204ENST00000407122 DNMBPQ6XZF7 1577 aa12.59□□□□□ -0.39
CLHC1-204ENST00000407122 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
CLHC1-204ENST00000407122 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
CLHC1-204ENST00000407122 CYB5RLQ6IPT4 315 aa12.57□□□□□ -0.4
CLHC1-204ENST00000407122 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLHC1-204ENST00000407122 ARAP1Q96P48 1450 aa12.54□□□□□ -0.4
CLHC1-204ENST00000407122 POLA1P09884 1462 aaPredicted RBP12.51□□□□□ -0.41
CLHC1-204ENST00000407122 FBLN2P98095 1184 aa12.5□□□□□ -0.41
CLHC1-204ENST00000407122 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
CLHC1-204ENST00000407122 RAD54L2Q9Y4B4 1467 aa12.48□□□□□ -0.41
CLHC1-204ENST00000407122 PPP6R1Q9UPN7 881 aa12.46□□□□□ -0.42
CLHC1-204ENST00000407122 TDRD9Q8NDG6 1382 aaKnown RBP12.45□□□□□ -0.42
CLHC1-204ENST00000407122 SNAPC4Q5SXM2 1469 aa12.43□□□□□ -0.42
CLHC1-204ENST00000407122 CLASP1Q7Z460 1538 aa12.43□□□□□ -0.42
CLHC1-204ENST00000407122 SOGA1O94964 1423 aa12.43□□□□□ -0.42
CLHC1-204ENST00000407122 FGD5Q6ZNL6 1462 aa12.41□□□□□ -0.42
CLHC1-204ENST00000407122 ADRA2BP18089 450 aa12.4□□□□□ -0.42
CLHC1-204ENST00000407122 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
CLHC1-204ENST00000407122 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
CLHC1-204ENST00000407122 CUX1P39880 1505 aa12.38□□□□□ -0.43
CLHC1-204ENST00000407122 MAGI1Q96QZ7 1491 aaPredicted RBP12.37□□□□□ -0.43
CLHC1-204ENST00000407122 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
CLHC1-204ENST00000407122 GRIN2BQ13224 1484 aa12.35□□□□□ -0.43
CLHC1-204ENST00000407122 PBRM1Q86U86 1689 aa12.34□□□□□ -0.43
CLHC1-204ENST00000407122 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
CLHC1-204ENST00000407122 GAPVD1Q14C86 1478 aa12.29□□□□□ -0.44
CLHC1-204ENST00000407122 ABCA5Q8WWZ7 1642 aa12.27□□□□□ -0.44
CLHC1-204ENST00000407122 ERCC6L2Q5T890 1561 aa12.25□□□□□ -0.45
CLHC1-204ENST00000407122 ABCA10Q8WWZ4 1543 aa12.25□□□□□ -0.45
CLHC1-204ENST00000407122 GRIN2AQ12879 1464 aa12.2□□□□□ -0.46
CLHC1-204ENST00000407122 ADAMTS12P58397 1594 aa12.19□□□□□ -0.46
CLHC1-204ENST00000407122 CEP170Q5SW79 1584 aa12.19□□□□□ -0.46
CLHC1-204ENST00000407122 NUP160Q12769 1436 aa12.16□□□□□ -0.46
CLHC1-204ENST00000407122 SHROOM2Q13796 1616 aa12.16□□□□□ -0.46
CLHC1-204ENST00000407122 KIF13AQ9H1H9 1805 aa12.14□□□□□ -0.47
CLHC1-204ENST00000407122 WRNQ14191 1432 aaPredicted RBP eCLIP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms