RNA–Protein interactions for RNA: ENST00000404625.5

IL6-204, Transcript of interleukin 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IL6, Length 1,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IL6-204ENST00000404625 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
IL6-204ENST00000404625 AEBP2Q6ZN18 517 aaPredicted RBP24.8■■□□□ 1.56
IL6-204ENST00000404625 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
IL6-204ENST00000404625 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.28
IL6-204ENST00000404625 ABCC9O60706 1549 aa23.07■■□□□ 1.28
IL6-204ENST00000404625 RB1CC1Q8TDY2 1594 aa21.98■■□□□ 1.11
IL6-204ENST00000404625 NACADO15069 1562 aa21.82■■□□□ 1.08
IL6-204ENST00000404625 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
IL6-204ENST00000404625 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
IL6-204ENST00000404625 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
IL6-204ENST00000404625 UNC13AQ9UPW8 1703 aa21.49■■□□□ 1.03
IL6-204ENST00000404625 PABPN1Q86U42 306 aaKnown RBP eCLIP21.47■■□□□ 1.03
IL6-204ENST00000404625 BICRAQ9NZM4 1560 aa21.32■■□□□ 1
IL6-204ENST00000404625 ZCCHC6Q5VYS8 1495 aaKnown RBP21.3■■□□□ 1
IL6-204ENST00000404625 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
IL6-204ENST00000404625 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
IL6-204ENST00000404625 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
IL6-204ENST00000404625 SCRIBQ14160 1630 aa21.02■□□□□ 0.96
IL6-204ENST00000404625 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
IL6-204ENST00000404625 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.92
IL6-204ENST00000404625 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
IL6-204ENST00000404625 CECR2Q9BXF3 1484 aa20.79■□□□□ 0.92
IL6-204ENST00000404625 NCAPD3P42695 1498 aa20.13■□□□□ 0.81
IL6-204ENST00000404625 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
IL6-204ENST00000404625 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
IL6-204ENST00000404625 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
IL6-204ENST00000404625 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
IL6-204ENST00000404625 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
IL6-204ENST00000404625 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
IL6-204ENST00000404625 CUX2O14529 1486 aa19.91■□□□□ 0.78
IL6-204ENST00000404625 DNAJC5Q9H3Z4 198 aa19.89■□□□□ 0.77
IL6-204ENST00000404625 BAZ1BQ9UIG0 1483 aaKnown RBP19.88■□□□□ 0.77
IL6-204ENST00000404625 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
IL6-204ENST00000404625 NESP48681 1621 aa19.81■□□□□ 0.76
IL6-204ENST00000404625 MROH2BQ7Z745 1585 aa19.79■□□□□ 0.76
IL6-204ENST00000404625 FOXD1Q16676 465 aa19.7■□□□□ 0.74
IL6-204ENST00000404625 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
IL6-204ENST00000404625 THOC2Q8NI27 1593 aaKnown RBP19.63■□□□□ 0.73
IL6-204ENST00000404625 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.73
IL6-204ENST00000404625 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.72
IL6-204ENST00000404625 WIZO95785 1651 aa19.56■□□□□ 0.72
IL6-204ENST00000404625 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.72
IL6-204ENST00000404625 MRC2Q9UBG0 1479 aa19.4■□□□□ 0.7
IL6-204ENST00000404625 RSF1Q96T23 1441 aaPredicted RBP19.37■□□□□ 0.69
IL6-204ENST00000404625 WDR62O43379 1518 aa19.36■□□□□ 0.69
IL6-204ENST00000404625 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.69
IL6-204ENST00000404625 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
IL6-204ENST00000404625 FANCD2Q9BXW9 1451 aa19.3■□□□□ 0.68
IL6-204ENST00000404625 CFTRP13569 1480 aa19.3■□□□□ 0.68
IL6-204ENST00000404625 URB2Q14146 1524 aaKnown RBP19.14■□□□□ 0.65
IL6-204ENST00000404625 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
IL6-204ENST00000404625 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
IL6-204ENST00000404625 TRIM41Q8WV44 630 aa19.03■□□□□ 0.64
IL6-204ENST00000404625 OSCARQ8IYS5 282 aa18.99■□□□□ 0.63
IL6-204ENST00000404625 IFT140Q96RY7 1462 aa18.94■□□□□ 0.62
IL6-204ENST00000404625 TOPBP1Q92547 1522 aa18.94■□□□□ 0.62
IL6-204ENST00000404625 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
IL6-204ENST00000404625 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
IL6-204ENST00000404625 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
IL6-204ENST00000404625 EIF4G3O43432 1585 aaKnown RBP18.82■□□□□ 0.6
IL6-204ENST00000404625 TARBP1Q13395 1621 aaKnown RBP18.77■□□□□ 0.6
IL6-204ENST00000404625 RIMBP3CA6NJZ7 1639 aa18.75■□□□□ 0.59
IL6-204ENST00000404625 RIMBP3BA6NNM3 1639 aa18.75■□□□□ 0.59
IL6-204ENST00000404625 RIMBP3Q9UFD9 1639 aa18.75■□□□□ 0.59
IL6-204ENST00000404625 POLA1P09884 1462 aaPredicted RBP18.74■□□□□ 0.59
IL6-204ENST00000404625 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.59
IL6-204ENST00000404625 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
IL6-204ENST00000404625 ARHGEF11O15085 1522 aa18.69■□□□□ 0.58
IL6-204ENST00000404625 CHD1O14646 1710 aa18.68■□□□□ 0.58
IL6-204ENST00000404625 RAD54L2Q9Y4B4 1467 aa18.66■□□□□ 0.58
IL6-204ENST00000404625 SOGA1O94964 1423 aa18.65■□□□□ 0.58
IL6-204ENST00000404625 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
IL6-204ENST00000404625 FBLN2P98095 1184 aa18.62■□□□□ 0.57
IL6-204ENST00000404625 TDRD9Q8NDG6 1382 aaKnown RBP18.61■□□□□ 0.57
IL6-204ENST00000404625 CUX1P39880 1505 aa18.6■□□□□ 0.57
IL6-204ENST00000404625 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
IL6-204ENST00000404625 SNAPC4Q5SXM2 1469 aa18.54■□□□□ 0.56
IL6-204ENST00000404625 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
IL6-204ENST00000404625 MAGI1Q96QZ7 1491 aaPredicted RBP18.51■□□□□ 0.55
IL6-204ENST00000404625 SUPT5HO00267 1087 aaKnown RBP18.5■□□□□ 0.55
IL6-204ENST00000404625 GRIN2BQ13224 1484 aa18.5■□□□□ 0.55
IL6-204ENST00000404625 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
IL6-204ENST00000404625 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
IL6-204ENST00000404625 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
IL6-204ENST00000404625 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
IL6-204ENST00000404625 PBRM1Q86U86 1689 aa18.44■□□□□ 0.54
IL6-204ENST00000404625 SYNJ2O15056 1496 aa18.44■□□□□ 0.54
IL6-204ENST00000404625 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
IL6-204ENST00000404625 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
IL6-204ENST00000404625 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
IL6-204ENST00000404625 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.54
IL6-204ENST00000404625 MSH5O43196 834 aa18.37■□□□□ 0.53
IL6-204ENST00000404625 PIAS4Q8N2W9 510 aaPredicted RBP18.37■□□□□ 0.53
IL6-204ENST00000404625 ADRA2BP18089 450 aa18.36■□□□□ 0.53
IL6-204ENST00000404625 TRHP20396 242 aaPredicted RBP18.34■□□□□ 0.53
IL6-204ENST00000404625 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.53
IL6-204ENST00000404625 BIVM-ERCC5R4GMW8 1640 aa18.31■□□□□ 0.52
IL6-204ENST00000404625 TOP2BQ02880 1626 aa18.3■□□□□ 0.52
IL6-204ENST00000404625 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
IL6-204ENST00000404625 ADAMTS12P58397 1594 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms