RNA–Protein interactions for RNA: ENST00000404337.1

KRT18P50-201, Transcript of keratin 18 pseudogene 50, humanhuman

BASIC

Gene KRT18P50, Length 1,243 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P50-201ENST00000404337 NISCHQ9Y2I1 1504 aa28.34■■■□□ 2.13
KRT18P50-201ENST00000404337 AEBP2Q6ZN18 517 aaPredicted RBP28.19■■■□□ 2.1
KRT18P50-201ENST00000404337 CHIC1Q5VXU3 224 aa26.44■■□□□ 1.82
KRT18P50-201ENST00000404337 CCDC180Q9P1Z9 1646 aa25.33■■□□□ 1.65
KRT18P50-201ENST00000404337 ABCC9O60706 1549 aa25.31■■□□□ 1.64
KRT18P50-201ENST00000404337 RB1CC1Q8TDY2 1594 aa24.12■■□□□ 1.45
KRT18P50-201ENST00000404337 DCAF8L2P0C7V8 631 aa24.03■■□□□ 1.44
KRT18P50-201ENST00000404337 NACADO15069 1562 aa23.99■■□□□ 1.43
KRT18P50-201ENST00000404337 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
KRT18P50-201ENST00000404337 MYO15BQ96JP2 1530 aa23.69■■□□□ 1.38
KRT18P50-201ENST00000404337 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
KRT18P50-201ENST00000404337 DNAJC5BQ9UF47 199 aa23.62■■□□□ 1.37
KRT18P50-201ENST00000404337 PHF23Q9BUL5 403 aaPredicted RBP23.6■■□□□ 1.37
KRT18P50-201ENST00000404337 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
KRT18P50-201ENST00000404337 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
KRT18P50-201ENST00000404337 UNC13AQ9UPW8 1703 aa23.41■■□□□ 1.34
KRT18P50-201ENST00000404337 BICRAQ9NZM4 1560 aa23.34■■□□□ 1.33
KRT18P50-201ENST00000404337 SHROOM4Q9ULL8 1493 aa23.12■■□□□ 1.29
KRT18P50-201ENST00000404337 SCRIBQ14160 1630 aa23.12■■□□□ 1.29
KRT18P50-201ENST00000404337 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
KRT18P50-201ENST00000404337 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
KRT18P50-201ENST00000404337 CECR2Q9BXF3 1484 aa22.8■■□□□ 1.24
KRT18P50-201ENST00000404337 FOXD1Q16676 465 aa22.41■■□□□ 1.18
KRT18P50-201ENST00000404337 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
KRT18P50-201ENST00000404337 ATAD2BQ9ULI0 1458 aa22.09■■□□□ 1.13
KRT18P50-201ENST00000404337 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
KRT18P50-201ENST00000404337 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
KRT18P50-201ENST00000404337 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
KRT18P50-201ENST00000404337 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
KRT18P50-201ENST00000404337 BAZ1BQ9UIG0 1483 aaKnown RBP21.91■■□□□ 1.1
KRT18P50-201ENST00000404337 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
KRT18P50-201ENST00000404337 PEG3Q9GZU2 1588 aa21.83■■□□□ 1.09
KRT18P50-201ENST00000404337 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
KRT18P50-201ENST00000404337 CUX2O14529 1486 aa21.77■■□□□ 1.08
KRT18P50-201ENST00000404337 NESP48681 1621 aa21.73■■□□□ 1.07
KRT18P50-201ENST00000404337 DNAJC5Q9H3Z4 198 aa21.68■■□□□ 1.06
KRT18P50-201ENST00000404337 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
KRT18P50-201ENST00000404337 PDS5BQ9NTI5 1447 aa21.56■■□□□ 1.04
KRT18P50-201ENST00000404337 WIZO95785 1651 aa21.53■■□□□ 1.04
KRT18P50-201ENST00000404337 CADPSQ9ULU8 1353 aa21.52■■□□□ 1.04
KRT18P50-201ENST00000404337 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
KRT18P50-201ENST00000404337 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
KRT18P50-201ENST00000404337 KIF21AQ7Z4S6 1674 aa21.38■■□□□ 1.01
KRT18P50-201ENST00000404337 MRC2Q9UBG0 1479 aa21.32■■□□□ 1
KRT18P50-201ENST00000404337 TOP2AP11388 1531 aaKnown RBP21.31■■□□□ 1
KRT18P50-201ENST00000404337 CEP164Q9UPV0 1460 aa21.27■■□□□ 1
KRT18P50-201ENST00000404337 CFTRP13569 1480 aa21.26■□□□□ 0.99
KRT18P50-201ENST00000404337 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
KRT18P50-201ENST00000404337 WDR62O43379 1518 aa21.23■□□□□ 0.99
KRT18P50-201ENST00000404337 CCDC88BA6NC98 1476 aa21.09■□□□□ 0.97
KRT18P50-201ENST00000404337 URB2Q14146 1524 aaKnown RBP21.03■□□□□ 0.96
KRT18P50-201ENST00000404337 POTEDQ86YR6 584 aa20.96■□□□□ 0.95
KRT18P50-201ENST00000404337 MSH5O43196 834 aa20.95■□□□□ 0.94
KRT18P50-201ENST00000404337 PLPPR3Q6T4P5 718 aa20.93■□□□□ 0.94
KRT18P50-201ENST00000404337 PRDM2Q13029 1718 aa20.92■□□□□ 0.94
KRT18P50-201ENST00000404337 OSCARQ8IYS5 282 aa20.89■□□□□ 0.93
KRT18P50-201ENST00000404337 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
KRT18P50-201ENST00000404337 IFT140Q96RY7 1462 aa20.85■□□□□ 0.93
KRT18P50-201ENST00000404337 TOPBP1Q92547 1522 aa20.83■□□□□ 0.93
KRT18P50-201ENST00000404337 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
KRT18P50-201ENST00000404337 PPP6R1Q9UPN7 881 aa20.81■□□□□ 0.92
KRT18P50-201ENST00000404337 PIAS4Q8N2W9 510 aaPredicted RBP20.8■□□□□ 0.92
KRT18P50-201ENST00000404337 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
KRT18P50-201ENST00000404337 ZNF608Q9ULD9 1512 aaPredicted RBP20.76■□□□□ 0.91
KRT18P50-201ENST00000404337 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
KRT18P50-201ENST00000404337 ADRA2BP18089 450 aa20.66■□□□□ 0.9
KRT18P50-201ENST00000404337 POLA1P09884 1462 aaPredicted RBP20.63■□□□□ 0.89
KRT18P50-201ENST00000404337 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.89
KRT18P50-201ENST00000404337 EIF4G3O43432 1585 aaKnown RBP20.62■□□□□ 0.89
KRT18P50-201ENST00000404337 SOGA1O94964 1423 aa20.6■□□□□ 0.89
KRT18P50-201ENST00000404337 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
KRT18P50-201ENST00000404337 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
KRT18P50-201ENST00000404337 FBLN2P98095 1184 aa20.56■□□□□ 0.88
KRT18P50-201ENST00000404337 TDRD9Q8NDG6 1382 aaKnown RBP20.54■□□□□ 0.88
KRT18P50-201ENST00000404337 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
KRT18P50-201ENST00000404337 CUX1P39880 1505 aa20.49■□□□□ 0.87
KRT18P50-201ENST00000404337 RIMBP3CA6NJZ7 1639 aa20.45■□□□□ 0.87
KRT18P50-201ENST00000404337 RIMBP3BA6NNM3 1639 aa20.45■□□□□ 0.87
KRT18P50-201ENST00000404337 RIMBP3Q9UFD9 1639 aa20.45■□□□□ 0.87
KRT18P50-201ENST00000404337 ARHGEF11O15085 1522 aa20.44■□□□□ 0.86
KRT18P50-201ENST00000404337 WDR97A6NE52 1622 aa20.43■□□□□ 0.86
KRT18P50-201ENST00000404337 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
KRT18P50-201ENST00000404337 CHD1O14646 1710 aa20.4■□□□□ 0.86
KRT18P50-201ENST00000404337 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
KRT18P50-201ENST00000404337 GRIN2BQ13224 1484 aa20.39■□□□□ 0.85
KRT18P50-201ENST00000404337 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
KRT18P50-201ENST00000404337 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
KRT18P50-201ENST00000404337 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
KRT18P50-201ENST00000404337 ABCA10Q8WWZ4 1543 aa20.31■□□□□ 0.84
KRT18P50-201ENST00000404337 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
KRT18P50-201ENST00000404337 WRNQ14191 1432 aaPredicted RBP eCLIP20.3■□□□□ 0.84
KRT18P50-201ENST00000404337 SYNJ1O43426 1573 aa20.27■□□□□ 0.84
KRT18P50-201ENST00000404337 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
KRT18P50-201ENST00000404337 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
KRT18P50-201ENST00000404337 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
KRT18P50-201ENST00000404337 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
KRT18P50-201ENST00000404337 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
KRT18P50-201ENST00000404337 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
KRT18P50-201ENST00000404337 TRHP20396 242 aaPredicted RBP20.15■□□□□ 0.82
KRT18P50-201ENST00000404337 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms