RNA–Protein interactions for RNA: ENST00000404319.1

NIP7P3-201, Transcript of NIP7, nucleolar pre-rRNA processing protein pseudogene 3, humanhuman

BASIC

Gene NIP7P3, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7P3-201ENST00000404319 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
NIP7P3-201ENST00000404319 ABCC9O60706 1549 aa20.28■□□□□ 0.84
NIP7P3-201ENST00000404319 CCDC180Q9P1Z9 1646 aa19.99■□□□□ 0.79
NIP7P3-201ENST00000404319 DNAJC5BQ9UF47 199 aa19.28■□□□□ 0.68
NIP7P3-201ENST00000404319 RB1CC1Q8TDY2 1594 aa19.24■□□□□ 0.67
NIP7P3-201ENST00000404319 NACADO15069 1562 aa19.04■□□□□ 0.64
NIP7P3-201ENST00000404319 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
NIP7P3-201ENST00000404319 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
NIP7P3-201ENST00000404319 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
NIP7P3-201ENST00000404319 UNC13AQ9UPW8 1703 aa18.64■□□□□ 0.57
NIP7P3-201ENST00000404319 BICRAQ9NZM4 1560 aa18.56■□□□□ 0.56
NIP7P3-201ENST00000404319 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
NIP7P3-201ENST00000404319 SHROOM4Q9ULL8 1493 aa18.43■□□□□ 0.54
NIP7P3-201ENST00000404319 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
NIP7P3-201ENST00000404319 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
NIP7P3-201ENST00000404319 CC2D2AQ9P2K1 1620 aa18.3■□□□□ 0.52
NIP7P3-201ENST00000404319 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
NIP7P3-201ENST00000404319 EIF4G1Q04637 1599 aaKnown RBP18.19■□□□□ 0.5
NIP7P3-201ENST00000404319 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
NIP7P3-201ENST00000404319 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
NIP7P3-201ENST00000404319 DNAJC5Q9H3Z4 198 aa18.06■□□□□ 0.48
NIP7P3-201ENST00000404319 CUX2O14529 1486 aa17.67■□□□□ 0.42
NIP7P3-201ENST00000404319 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
NIP7P3-201ENST00000404319 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
NIP7P3-201ENST00000404319 ATAD2BQ9ULI0 1458 aa17.45■□□□□ 0.38
NIP7P3-201ENST00000404319 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
NIP7P3-201ENST00000404319 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
NIP7P3-201ENST00000404319 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
NIP7P3-201ENST00000404319 NESP48681 1621 aa17.3■□□□□ 0.36
NIP7P3-201ENST00000404319 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
NIP7P3-201ENST00000404319 BAZ1AQ9NRL2 1556 aaPredicted RBP17.26■□□□□ 0.35
NIP7P3-201ENST00000404319 PDS5BQ9NTI5 1447 aa17.22■□□□□ 0.35
NIP7P3-201ENST00000404319 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
NIP7P3-201ENST00000404319 PEG3Q9GZU2 1588 aa17.16■□□□□ 0.34
NIP7P3-201ENST00000404319 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
NIP7P3-201ENST00000404319 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
NIP7P3-201ENST00000404319 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
NIP7P3-201ENST00000404319 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
NIP7P3-201ENST00000404319 MROH2BQ7Z745 1585 aa17.03■□□□□ 0.32
NIP7P3-201ENST00000404319 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
NIP7P3-201ENST00000404319 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
NIP7P3-201ENST00000404319 WDR62O43379 1518 aa16.91■□□□□ 0.3
NIP7P3-201ENST00000404319 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
NIP7P3-201ENST00000404319 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
NIP7P3-201ENST00000404319 WIZO95785 1651 aa16.8■□□□□ 0.28
NIP7P3-201ENST00000404319 CFTRP13569 1480 aa16.77■□□□□ 0.28
NIP7P3-201ENST00000404319 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
NIP7P3-201ENST00000404319 RSF1Q96T23 1441 aaPredicted RBP16.63■□□□□ 0.25
NIP7P3-201ENST00000404319 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
NIP7P3-201ENST00000404319 IFT140Q96RY7 1462 aa16.57■□□□□ 0.24
NIP7P3-201ENST00000404319 RIMBP3CA6NJZ7 1639 aa16.54■□□□□ 0.24
NIP7P3-201ENST00000404319 RIMBP3BA6NNM3 1639 aa16.54■□□□□ 0.24
NIP7P3-201ENST00000404319 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
NIP7P3-201ENST00000404319 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
NIP7P3-201ENST00000404319 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
NIP7P3-201ENST00000404319 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
NIP7P3-201ENST00000404319 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
NIP7P3-201ENST00000404319 TRHP20396 242 aaPredicted RBP16.48■□□□□ 0.23
NIP7P3-201ENST00000404319 ARHGEF11O15085 1522 aa16.48■□□□□ 0.23
NIP7P3-201ENST00000404319 FBLN2P98095 1184 aa16.45■□□□□ 0.22
NIP7P3-201ENST00000404319 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
NIP7P3-201ENST00000404319 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
NIP7P3-201ENST00000404319 DNMBPQ6XZF7 1577 aa16.36■□□□□ 0.21
NIP7P3-201ENST00000404319 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
NIP7P3-201ENST00000404319 EIF4G3O43432 1585 aaKnown RBP16.35■□□□□ 0.21
NIP7P3-201ENST00000404319 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
NIP7P3-201ENST00000404319 CHD1O14646 1710 aa16.28■□□□□ 0.2
NIP7P3-201ENST00000404319 TARBP1Q13395 1621 aaKnown RBP16.28■□□□□ 0.2
NIP7P3-201ENST00000404319 ARAP1Q96P48 1450 aa16.27■□□□□ 0.19
NIP7P3-201ENST00000404319 SOGA1O94964 1423 aa16.27■□□□□ 0.19
NIP7P3-201ENST00000404319 POLA1P09884 1462 aaPredicted RBP16.25■□□□□ 0.19
NIP7P3-201ENST00000404319 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
NIP7P3-201ENST00000404319 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
NIP7P3-201ENST00000404319 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
NIP7P3-201ENST00000404319 SYNJ1O43426 1573 aa16.16■□□□□ 0.18
NIP7P3-201ENST00000404319 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
NIP7P3-201ENST00000404319 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
NIP7P3-201ENST00000404319 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
NIP7P3-201ENST00000404319 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
NIP7P3-201ENST00000404319 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
NIP7P3-201ENST00000404319 CLASP1Q7Z460 1538 aa16.1■□□□□ 0.17
NIP7P3-201ENST00000404319 PHF23Q9BUL5 403 aaPredicted RBP16.08■□□□□ 0.16
NIP7P3-201ENST00000404319 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
NIP7P3-201ENST00000404319 CUX1P39880 1505 aa16.02■□□□□ 0.15
NIP7P3-201ENST00000404319 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
NIP7P3-201ENST00000404319 PBRM1Q86U86 1689 aa15.93■□□□□ 0.14
NIP7P3-201ENST00000404319 WRNQ14191 1432 aaPredicted RBP eCLIP15.91■□□□□ 0.14
NIP7P3-201ENST00000404319 GRIN2AQ12879 1464 aa15.88■□□□□ 0.13
NIP7P3-201ENST00000404319 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
NIP7P3-201ENST00000404319 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
NIP7P3-201ENST00000404319 FHAD1B1AJZ9 1412 aa15.84■□□□□ 0.13
NIP7P3-201ENST00000404319 NUP160Q12769 1436 aa15.83■□□□□ 0.12
NIP7P3-201ENST00000404319 CEP170Q5SW79 1584 aa15.82■□□□□ 0.12
NIP7P3-201ENST00000404319 JPH4Q96JJ6 628 aa15.81■□□□□ 0.12
NIP7P3-201ENST00000404319 SUPT5HO00267 1087 aaKnown RBP15.79■□□□□ 0.12
NIP7P3-201ENST00000404319 ERCC6L2Q5T890 1561 aa15.78■□□□□ 0.12
NIP7P3-201ENST00000404319 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.11
NIP7P3-201ENST00000404319 ADAMTS12P58397 1594 aa15.76■□□□□ 0.11
NIP7P3-201ENST00000404319 FAM69CQ0P6D2 419 aa15.76■□□□□ 0.11
NIP7P3-201ENST00000404319 ERICH3Q5RHP9 1530 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms