RNA–Protein interactions for RNA: ENST00000404261.8

ANKLE1-203, Transcript of ankyrin repeat and LEM domain containing 1, humanhuman

TSL 2

Gene ANKLE1, Length 1,821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKLE1-203ENST00000404261 NISCHQ9Y2I1 1504 aa51.24■■■■■ 5.79
ANKLE1-203ENST00000404261 CCDC180Q9P1Z9 1646 aa44.47■■■■■ 4.71
ANKLE1-203ENST00000404261 ZCCHC6Q5VYS8 1495 aaKnown RBP43.08■■■■■ 4.49
ANKLE1-203ENST00000404261 DCAF8L2P0C7V8 631 aa42.41■■■■■ 4.38
ANKLE1-203ENST00000404261 DCAF1Q9Y4B6 1507 aa42.25■■■■■ 4.35
ANKLE1-203ENST00000404261 SHROOM4Q9ULL8 1493 aa42.16■■■■■ 4.34
ANKLE1-203ENST00000404261 ABCC9O60706 1549 aa42.06■■■■■ 4.32
ANKLE1-203ENST00000404261 MYO15BQ96JP2 1530 aa41.63■■■■■ 4.25
ANKLE1-203ENST00000404261 NACADO15069 1562 aa41.38■■■■■ 4.22
ANKLE1-203ENST00000404261 SCRIBQ14160 1630 aa41.11■■■■■ 4.17
ANKLE1-203ENST00000404261 RB1CC1Q8TDY2 1594 aa40.99■■■■■ 4.15
ANKLE1-203ENST00000404261 SUPT5HO00267 1087 aaKnown RBP40.65■■■■■ 4.1
ANKLE1-203ENST00000404261 UNC13AQ9UPW8 1703 aa40.33■■■■■ 4.05
ANKLE1-203ENST00000404261 CECR2Q9BXF3 1484 aa39.92■■■■□ 3.98
ANKLE1-203ENST00000404261 RSF1Q96T23 1441 aaPredicted RBP39.89■■■■□ 3.98
ANKLE1-203ENST00000404261 BICRAQ9NZM4 1560 aa39.88■■■■□ 3.98
ANKLE1-203ENST00000404261 PABPN1Q86U42 306 aaKnown RBP eCLIP39.78■■■■□ 3.96
ANKLE1-203ENST00000404261 MROH2BQ7Z745 1585 aa39.68■■■■□ 3.94
ANKLE1-203ENST00000404261 BAZ1AQ9NRL2 1556 aaPredicted RBP39.49■■■■□ 3.91
ANKLE1-203ENST00000404261 WIZO95785 1651 aa39.39■■■■□ 3.9
ANKLE1-203ENST00000404261 SMARCA4P51532 1647 aa39.35■■■■□ 3.89
ANKLE1-203ENST00000404261 CHIC1Q5VXU3 224 aa38.99■■■■□ 3.83
ANKLE1-203ENST00000404261 TOP2AP11388 1531 aaKnown RBP38.86■■■■□ 3.81
ANKLE1-203ENST00000404261 PEG3Q9GZU2 1588 aa38.79■■■■□ 3.8
ANKLE1-203ENST00000404261 ATAD2BQ9ULI0 1458 aa38.66■■■■□ 3.78
ANKLE1-203ENST00000404261 EIF4G1Q04637 1599 aaKnown RBP38.61■■■■□ 3.77
ANKLE1-203ENST00000404261 SMARCA2P51531 1590 aa38.57■■■■□ 3.76
ANKLE1-203ENST00000404261 CCDC88BA6NC98 1476 aa38.56■■■■□ 3.76
ANKLE1-203ENST00000404261 BAZ1BQ9UIG0 1483 aaKnown RBP38.43■■■■□ 3.74
ANKLE1-203ENST00000404261 NCAPD3P42695 1498 aa38.24■■■■□ 3.71
ANKLE1-203ENST00000404261 HMGXB3Q12766 1538 aa38.17■■■■□ 3.7
ANKLE1-203ENST00000404261 TRIM41Q8WV44 630 aa38.11■■■■□ 3.69
ANKLE1-203ENST00000404261 CC2D2AQ9P2K1 1620 aa38.02■■■■□ 3.68
ANKLE1-203ENST00000404261 ABCC8Q09428 1581 aa37.88■■■■□ 3.65
ANKLE1-203ENST00000404261 LOC105371045A0A1W2PR82 267 aa37.62■■■■□ 3.61
ANKLE1-203ENST00000404261 FAM9AQ8IZU1 332 aaPredicted RBP37.55■■■■□ 3.6
ANKLE1-203ENST00000404261 WRNQ14191 1432 aaPredicted RBP eCLIP37.5■■■■□ 3.59
ANKLE1-203ENST00000404261 CFTRP13569 1480 aa37.47■■■■□ 3.59
ANKLE1-203ENST00000404261 SYNJ1O43426 1573 aa37.4■■■■□ 3.58
ANKLE1-203ENST00000404261 CADPSQ9ULU8 1353 aa37.3■■■■□ 3.56
ANKLE1-203ENST00000404261 PRDM2Q13029 1718 aa37.26■■■■□ 3.55
ANKLE1-203ENST00000404261 DNAJC5BQ9UF47 199 aa37.23■■■■□ 3.55
ANKLE1-203ENST00000404261 SOGA1O94964 1423 aa37.22■■■■□ 3.55
ANKLE1-203ENST00000404261 TOP2BQ02880 1626 aa37.15■■■■□ 3.54
ANKLE1-203ENST00000404261 RUSC2Q8N2Y8 1516 aa37.11■■■■□ 3.53
ANKLE1-203ENST00000404261 BIVM-ERCC5R4GMW8 1640 aa37.1■■■■□ 3.53
ANKLE1-203ENST00000404261 EHMT2Q96KQ7 1210 aa37.1■■■■□ 3.53
ANKLE1-203ENST00000404261 CUX1P39880 1505 aa37.07■■■■□ 3.53
ANKLE1-203ENST00000404261 NESP48681 1621 aa37.03■■■■□ 3.52
ANKLE1-203ENST00000404261 EEA1Q15075 1411 aa36.96■■■■□ 3.51
ANKLE1-203ENST00000404261 FANCD2Q9BXW9 1451 aa36.91■■■■□ 3.5
ANKLE1-203ENST00000404261 CSRNP3Q8WYN3 585 aa36.89■■■■□ 3.5
ANKLE1-203ENST00000404261 LAMC3Q9Y6N6 1575 aa36.87■■■■□ 3.49
ANKLE1-203ENST00000404261 CEP164Q9UPV0 1460 aa36.61■■■■□ 3.45
ANKLE1-203ENST00000404261 FGD5Q6ZNL6 1462 aa36.6■■■■□ 3.45
ANKLE1-203ENST00000404261 DNMBPQ6XZF7 1577 aa36.58■■■■□ 3.45
ANKLE1-203ENST00000404261 PDS5BQ9NTI5 1447 aa36.58■■■■□ 3.45
ANKLE1-203ENST00000404261 GOLGA3Q08378 1498 aa36.55■■■■□ 3.44
ANKLE1-203ENST00000404261 TOPBP1Q92547 1522 aa36.55■■■■□ 3.44
ANKLE1-203ENST00000404261 KIF21BO75037 1637 aa36.55■■■■□ 3.44
ANKLE1-203ENST00000404261 KIF21AQ7Z4S6 1674 aa36.53■■■■□ 3.44
ANKLE1-203ENST00000404261 KIF27Q86VH2 1401 aa36.49■■■■□ 3.43
ANKLE1-203ENST00000404261 TNIKQ9UKE5 1360 aa36.49■■■■□ 3.43
ANKLE1-203ENST00000404261 URB2Q14146 1524 aaKnown RBP36.48■■■■□ 3.43
ANKLE1-203ENST00000404261 UBTFP17480 764 aaKnown RBP36.46■■■■□ 3.43
ANKLE1-203ENST00000404261 CUX2O14529 1486 aa36.41■■■■□ 3.42
ANKLE1-203ENST00000404261 RAPGEF2Q9Y4G8 1499 aa36.41■■■■□ 3.42
ANKLE1-203ENST00000404261 POLA1P09884 1462 aaPredicted RBP36.39■■■■□ 3.42
ANKLE1-203ENST00000404261 CEP162Q5TB80 1403 aa36.36■■■■□ 3.41
ANKLE1-203ENST00000404261 RAD54L2Q9Y4B4 1467 aa36.35■■■■□ 3.41
ANKLE1-203ENST00000404261 PRXQ9BXM0 1461 aa36.34■■■■□ 3.41
ANKLE1-203ENST00000404261 ERICH3Q5RHP9 1530 aa36.24■■■■□ 3.39
ANKLE1-203ENST00000404261 IGF1RP08069 1367 aa36.23■■■■□ 3.39
ANKLE1-203ENST00000404261 ABCA10Q8WWZ4 1543 aa36.23■■■■□ 3.39
ANKLE1-203ENST00000404261 MRC2Q9UBG0 1479 aa36.13■■■■□ 3.37
ANKLE1-203ENST00000404261 WDR97A6NE52 1622 aa36.12■■■■□ 3.37
ANKLE1-203ENST00000404261 PCGF6Q9BYE7 350 aa36.07■■■■□ 3.36
ANKLE1-203ENST00000404261 CARMIL1Q5VZK9 1371 aa36.02■■■■□ 3.36
ANKLE1-203ENST00000404261 CLIP1P30622 1438 aa36.01■■■■□ 3.36
ANKLE1-203ENST00000404261 TARBP1Q13395 1621 aaKnown RBP35.99■■■■□ 3.35
ANKLE1-203ENST00000404261 TDRD9Q8NDG6 1382 aaKnown RBP35.97■■■■□ 3.35
ANKLE1-203ENST00000404261 RANGAP1P46060 587 aaPredicted RBP35.94■■■■□ 3.34
ANKLE1-203ENST00000404261 ERCC6Q03468 1493 aa35.94■■■■□ 3.34
ANKLE1-203ENST00000404261 ABCA5Q8WWZ7 1642 aa35.94■■■■□ 3.34
ANKLE1-203ENST00000404261 WDR62O43379 1518 aa35.93■■■■□ 3.34
ANKLE1-203ENST00000404261 TRIM26Q12899 539 aaPredicted RBP35.9■■■■□ 3.34
ANKLE1-203ENST00000404261 PPARGC1BQ86YN6 1023 aaKnown RBP35.9■■■■□ 3.34
ANKLE1-203ENST00000404261 GAPVD1Q14C86 1478 aa35.86■■■■□ 3.33
ANKLE1-203ENST00000404261 THOC2Q8NI27 1593 aaKnown RBP35.81■■■■□ 3.32
ANKLE1-203ENST00000404261 CUL7Q14999 1698 aa35.81■■■■□ 3.32
ANKLE1-203ENST00000404261 AQRO60306 1485 aaKnown RBP eCLIP35.71■■■■□ 3.31
ANKLE1-203ENST00000404261 VPS8Q8N3P4 1428 aa35.71■■■■□ 3.31
ANKLE1-203ENST00000404261 IFT140Q96RY7 1462 aa35.7■■■■□ 3.31
ANKLE1-203ENST00000404261 ARAP1Q96P48 1450 aa35.68■■■■□ 3.3
ANKLE1-203ENST00000404261 ZNF608Q9ULD9 1512 aaPredicted RBP35.65■■■■□ 3.3
ANKLE1-203ENST00000404261 PBRM1Q86U86 1689 aa35.65■■■■□ 3.3
ANKLE1-203ENST00000404261 ARHGAP35Q9NRY4 1499 aa35.62■■■■□ 3.29
ANKLE1-203ENST00000404261 TTBK1Q5TCY1 1321 aaPredicted RBP35.54■■■■□ 3.28
ANKLE1-203ENST00000404261 GRIN2BQ13224 1484 aa35.51■■■■□ 3.28
ANKLE1-203ENST00000404261 CTTNBP2Q8WZ74 1663 aa35.51■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms