RNA–Protein interactions for RNA: ENST00000403712.6

SH3YL1-205, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SH3YL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-205ENST00000403712 AEBP2Q6ZN18 517 aaPredicted RBP23.99■■□□□ 1.43
SH3YL1-205ENST00000403712 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
SH3YL1-205ENST00000403712 NISCHQ9Y2I1 1504 aa22.29■■□□□ 1.16
SH3YL1-205ENST00000403712 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
SH3YL1-205ENST00000403712 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
SH3YL1-205ENST00000403712 ABCC9O60706 1549 aa19.94■□□□□ 0.78
SH3YL1-205ENST00000403712 CCDC180Q9P1Z9 1646 aa19.92■□□□□ 0.78
SH3YL1-205ENST00000403712 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
SH3YL1-205ENST00000403712 FOXD1Q16676 465 aa19.31■□□□□ 0.68
SH3YL1-205ENST00000403712 RB1CC1Q8TDY2 1594 aa18.94■□□□□ 0.62
SH3YL1-205ENST00000403712 DCAF8L2P0C7V8 631 aa18.92■□□□□ 0.62
SH3YL1-205ENST00000403712 NACADO15069 1562 aa18.82■□□□□ 0.6
SH3YL1-205ENST00000403712 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
SH3YL1-205ENST00000403712 PABPN1Q86U42 306 aaKnown RBP eCLIP18.63■□□□□ 0.577e-9■■■□□ 17.2
SH3YL1-205ENST00000403712 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
SH3YL1-205ENST00000403712 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
SH3YL1-205ENST00000403712 ZCCHC6Q5VYS8 1495 aaKnown RBP18.48■□□□□ 0.55
SH3YL1-205ENST00000403712 MSH5O43196 834 aa18.44■□□□□ 0.54
SH3YL1-205ENST00000403712 BICRAQ9NZM4 1560 aa18.41■□□□□ 0.54
SH3YL1-205ENST00000403712 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
SH3YL1-205ENST00000403712 SCRIBQ14160 1630 aa18.24■□□□□ 0.51
SH3YL1-205ENST00000403712 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
SH3YL1-205ENST00000403712 CC2D2AQ9P2K1 1620 aa17.99■□□□□ 0.47
SH3YL1-205ENST00000403712 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.47
SH3YL1-205ENST00000403712 CECR2Q9BXF3 1484 aa17.92■□□□□ 0.46
SH3YL1-205ENST00000403712 PIAS4Q8N2W9 510 aaPredicted RBP17.87■□□□□ 0.45
SH3YL1-205ENST00000403712 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
SH3YL1-205ENST00000403712 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
SH3YL1-205ENST00000403712 SMARCA4P51532 1647 aa17.37■□□□□ 0.37
SH3YL1-205ENST00000403712 ATAD2BQ9ULI0 1458 aa17.37■□□□□ 0.37
SH3YL1-205ENST00000403712 ADRA2BP18089 450 aa17.32■□□□□ 0.36
SH3YL1-205ENST00000403712 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
SH3YL1-205ENST00000403712 DNAJC5Q9H3Z4 198 aa17.29■□□□□ 0.36
SH3YL1-205ENST00000403712 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
SH3YL1-205ENST00000403712 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
SH3YL1-205ENST00000403712 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
SH3YL1-205ENST00000403712 BAZ1BQ9UIG0 1483 aaKnown RBP17.21■□□□□ 0.35
SH3YL1-205ENST00000403712 MROH2BQ7Z745 1585 aa17.21■□□□□ 0.35
SH3YL1-205ENST00000403712 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
SH3YL1-205ENST00000403712 NESP48681 1621 aa17.16■□□□□ 0.34
SH3YL1-205ENST00000403712 PEG3Q9GZU2 1588 aa17.16■□□□□ 0.34
SH3YL1-205ENST00000403712 CUX2O14529 1486 aa17.06■□□□□ 0.32
SH3YL1-205ENST00000403712 WIZO95785 1651 aa17.02■□□□□ 0.32
SH3YL1-205ENST00000403712 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
SH3YL1-205ENST00000403712 KIF21AQ7Z4S6 1674 aa16.92■□□□□ 0.3
SH3YL1-205ENST00000403712 THOC2Q8NI27 1593 aaKnown RBP16.9■□□□□ 0.3
SH3YL1-205ENST00000403712 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
SH3YL1-205ENST00000403712 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
SH3YL1-205ENST00000403712 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
SH3YL1-205ENST00000403712 TOP2AP11388 1531 aaKnown RBP16.76■□□□□ 0.27
SH3YL1-205ENST00000403712 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
SH3YL1-205ENST00000403712 CFTRP13569 1480 aa16.7■□□□□ 0.26
SH3YL1-205ENST00000403712 FANCD2Q9BXW9 1451 aa16.7■□□□□ 0.26
SH3YL1-205ENST00000403712 CEP164Q9UPV0 1460 aa16.7■□□□□ 0.26
SH3YL1-205ENST00000403712 WDR62O43379 1518 aa16.69■□□□□ 0.26
SH3YL1-205ENST00000403712 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
SH3YL1-205ENST00000403712 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
SH3YL1-205ENST00000403712 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
SH3YL1-205ENST00000403712 TOPBP1Q92547 1522 aa16.39■□□□□ 0.21
SH3YL1-205ENST00000403712 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
SH3YL1-205ENST00000403712 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
SH3YL1-205ENST00000403712 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
SH3YL1-205ENST00000403712 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
SH3YL1-205ENST00000403712 ABCC8Q09428 1581 aa16.32■□□□□ 0.2
SH3YL1-205ENST00000403712 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
SH3YL1-205ENST00000403712 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
SH3YL1-205ENST00000403712 SUPT5HO00267 1087 aaKnown RBP16.3■□□□□ 0.2
SH3YL1-205ENST00000403712 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
SH3YL1-205ENST00000403712 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.19
SH3YL1-205ENST00000403712 POLA1P09884 1462 aaPredicted RBP16.24■□□□□ 0.19
SH3YL1-205ENST00000403712 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
SH3YL1-205ENST00000403712 TARBP1Q13395 1621 aaKnown RBP16.23■□□□□ 0.19
SH3YL1-205ENST00000403712 RAD54L2Q9Y4B4 1467 aa16.21■□□□□ 0.19
SH3YL1-205ENST00000403712 SOGA1O94964 1423 aa16.18■□□□□ 0.18
SH3YL1-205ENST00000403712 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
SH3YL1-205ENST00000403712 FBLN2P98095 1184 aa16.17■□□□□ 0.18
SH3YL1-205ENST00000403712 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
SH3YL1-205ENST00000403712 CUX1P39880 1505 aa16.16■□□□□ 0.18
SH3YL1-205ENST00000403712 MAPK8IP2Q13387 824 aaPredicted RBP16.15■□□□□ 0.18
SH3YL1-205ENST00000403712 CHD1O14646 1710 aa16.14■□□□□ 0.17
SH3YL1-205ENST00000403712 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
SH3YL1-205ENST00000403712 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
SH3YL1-205ENST00000403712 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
SH3YL1-205ENST00000403712 ARHGEF11O15085 1522 aa16.08■□□□□ 0.17
SH3YL1-205ENST00000403712 SNAPC4Q5SXM2 1469 aa16.05■□□□□ 0.16
SH3YL1-205ENST00000403712 CYB5RLQ6IPT4 315 aa16.03■□□□□ 0.16
SH3YL1-205ENST00000403712 CHMP7Q8WUX9 453 aaPredicted RBP16.02■□□□□ 0.16
SH3YL1-205ENST00000403712 WDR97A6NE52 1622 aa16■□□□□ 0.15
SH3YL1-205ENST00000403712 GRIN2BQ13224 1484 aa16■□□□□ 0.15
SH3YL1-205ENST00000403712 GAPVD1Q14C86 1478 aa15.98■□□□□ 0.15
SH3YL1-205ENST00000403712 MAGI1Q96QZ7 1491 aaPredicted RBP15.98■□□□□ 0.15
SH3YL1-205ENST00000403712 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
SH3YL1-205ENST00000403712 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
SH3YL1-205ENST00000403712 SYNJ2O15056 1496 aa15.94■□□□□ 0.14
SH3YL1-205ENST00000403712 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
SH3YL1-205ENST00000403712 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
SH3YL1-205ENST00000403712 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
SH3YL1-205ENST00000403712 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
SH3YL1-205ENST00000403712 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
SH3YL1-205ENST00000403712 CLASP1Q7Z460 1538 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms