RNA–Protein interactions for RNA: ENST00000402419.1

RPL35P2-201, Transcript of ribosomal protein L35 pseudogene 2, humanhuman

BASIC

Gene RPL35P2, Length 363 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P2-201ENST00000402419 NISCHQ9Y2I1 1504 aa24.64■■□□□ 1.53
RPL35P2-201ENST00000402419 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
RPL35P2-201ENST00000402419 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
RPL35P2-201ENST00000402419 ABCC9O60706 1549 aa21.96■■□□□ 1.11
RPL35P2-201ENST00000402419 CCDC180Q9P1Z9 1646 aa21.92■■□□□ 1.1
RPL35P2-201ENST00000402419 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
RPL35P2-201ENST00000402419 SENP3Q9H4L4 574 aaPredicted RBP20.93■□□□□ 0.94
RPL35P2-201ENST00000402419 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
RPL35P2-201ENST00000402419 DCAF8L2P0C7V8 631 aa20.77■□□□□ 0.92
RPL35P2-201ENST00000402419 NACADO15069 1562 aa20.76■□□□□ 0.91
RPL35P2-201ENST00000402419 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
RPL35P2-201ENST00000402419 PABPN1Q86U42 306 aaKnown RBP eCLIP20.54■□□□□ 0.88
RPL35P2-201ENST00000402419 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.87
RPL35P2-201ENST00000402419 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
RPL35P2-201ENST00000402419 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
RPL35P2-201ENST00000402419 BICRAQ9NZM4 1560 aa20.35■□□□□ 0.85
RPL35P2-201ENST00000402419 DCAF1Q9Y4B6 1507 aa20.31■□□□□ 0.84
RPL35P2-201ENST00000402419 SCRIBQ14160 1630 aa20.08■□□□□ 0.8
RPL35P2-201ENST00000402419 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
RPL35P2-201ENST00000402419 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
RPL35P2-201ENST00000402419 EIF4G1Q04637 1599 aaKnown RBP19.79■□□□□ 0.76
RPL35P2-201ENST00000402419 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
RPL35P2-201ENST00000402419 PLPPR3Q6T4P5 718 aa19.66■□□□□ 0.74
RPL35P2-201ENST00000402419 FOXD1Q16676 465 aa19.3■□□□□ 0.68
RPL35P2-201ENST00000402419 NCAPD3P42695 1498 aa19.23■□□□□ 0.67
RPL35P2-201ENST00000402419 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
RPL35P2-201ENST00000402419 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
RPL35P2-201ENST00000402419 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
RPL35P2-201ENST00000402419 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
RPL35P2-201ENST00000402419 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
RPL35P2-201ENST00000402419 MROH2BQ7Z745 1585 aa19.03■□□□□ 0.64
RPL35P2-201ENST00000402419 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
RPL35P2-201ENST00000402419 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
RPL35P2-201ENST00000402419 NESP48681 1621 aa18.94■□□□□ 0.62
RPL35P2-201ENST00000402419 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
RPL35P2-201ENST00000402419 CUX2O14529 1486 aa18.8■□□□□ 0.6
RPL35P2-201ENST00000402419 DNAJC5Q9H3Z4 198 aa18.76■□□□□ 0.59
RPL35P2-201ENST00000402419 WIZO95785 1651 aa18.76■□□□□ 0.59
RPL35P2-201ENST00000402419 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
RPL35P2-201ENST00000402419 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
RPL35P2-201ENST00000402419 CADPSQ9ULU8 1353 aa18.66■□□□□ 0.58
RPL35P2-201ENST00000402419 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.57
RPL35P2-201ENST00000402419 PDS5BQ9NTI5 1447 aa18.61■□□□□ 0.57
RPL35P2-201ENST00000402419 ADRA2BP18089 450 aa18.6■□□□□ 0.57
RPL35P2-201ENST00000402419 KIF21AQ7Z4S6 1674 aa18.58■□□□□ 0.57
RPL35P2-201ENST00000402419 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.56
RPL35P2-201ENST00000402419 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
RPL35P2-201ENST00000402419 CFTRP13569 1480 aa18.46■□□□□ 0.55
RPL35P2-201ENST00000402419 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.54
RPL35P2-201ENST00000402419 FANCD2Q9BXW9 1451 aa18.43■□□□□ 0.54
RPL35P2-201ENST00000402419 WDR62O43379 1518 aa18.41■□□□□ 0.54
RPL35P2-201ENST00000402419 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
RPL35P2-201ENST00000402419 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
RPL35P2-201ENST00000402419 URB2Q14146 1524 aaKnown RBP18.31■□□□□ 0.52
RPL35P2-201ENST00000402419 PIAS4Q8N2W9 510 aaPredicted RBP18.3■□□□□ 0.52
RPL35P2-201ENST00000402419 PRDM2Q13029 1718 aa18.11■□□□□ 0.49
RPL35P2-201ENST00000402419 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
RPL35P2-201ENST00000402419 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.49
RPL35P2-201ENST00000402419 IFT140Q96RY7 1462 aa18.03■□□□□ 0.48
RPL35P2-201ENST00000402419 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
RPL35P2-201ENST00000402419 DNMBPQ6XZF7 1577 aa18■□□□□ 0.47
RPL35P2-201ENST00000402419 ABCC8Q09428 1581 aa17.97■□□□□ 0.47
RPL35P2-201ENST00000402419 TRIM41Q8WV44 630 aa17.97■□□□□ 0.47
RPL35P2-201ENST00000402419 SUPT5HO00267 1087 aaKnown RBP17.94■□□□□ 0.46
RPL35P2-201ENST00000402419 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.46
RPL35P2-201ENST00000402419 POLA1P09884 1462 aaPredicted RBP17.93■□□□□ 0.46
RPL35P2-201ENST00000402419 TARBP1Q13395 1621 aaKnown RBP17.92■□□□□ 0.46
RPL35P2-201ENST00000402419 RAD54L2Q9Y4B4 1467 aa17.91■□□□□ 0.46
RPL35P2-201ENST00000402419 MSH5O43196 834 aa17.9■□□□□ 0.46
RPL35P2-201ENST00000402419 EIF4G3O43432 1585 aaKnown RBP17.88■□□□□ 0.45
RPL35P2-201ENST00000402419 CUX1P39880 1505 aa17.86■□□□□ 0.45
RPL35P2-201ENST00000402419 SOGA1O94964 1423 aa17.85■□□□□ 0.45
RPL35P2-201ENST00000402419 TDRD9Q8NDG6 1382 aaKnown RBP17.84■□□□□ 0.45
RPL35P2-201ENST00000402419 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
RPL35P2-201ENST00000402419 RIMBP3CA6NJZ7 1639 aa17.74■□□□□ 0.43
RPL35P2-201ENST00000402419 RIMBP3BA6NNM3 1639 aa17.74■□□□□ 0.43
RPL35P2-201ENST00000402419 RIMBP3Q9UFD9 1639 aa17.74■□□□□ 0.43
RPL35P2-201ENST00000402419 FBLN2P98095 1184 aa17.74■□□□□ 0.43
RPL35P2-201ENST00000402419 ARHGEF11O15085 1522 aa17.72■□□□□ 0.43
RPL35P2-201ENST00000402419 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
RPL35P2-201ENST00000402419 CHD1O14646 1710 aa17.69■□□□□ 0.42
RPL35P2-201ENST00000402419 GRIN2BQ13224 1484 aa17.64■□□□□ 0.41
RPL35P2-201ENST00000402419 WDR97A6NE52 1622 aa17.63■□□□□ 0.41
RPL35P2-201ENST00000402419 CYB5RLQ6IPT4 315 aa17.62■□□□□ 0.41
RPL35P2-201ENST00000402419 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
RPL35P2-201ENST00000402419 CHMP7Q8WUX9 453 aaPredicted RBP17.61■□□□□ 0.41
RPL35P2-201ENST00000402419 GAPVD1Q14C86 1478 aa17.61■□□□□ 0.41
RPL35P2-201ENST00000402419 MAGI1Q96QZ7 1491 aaPredicted RBP17.61■□□□□ 0.41
RPL35P2-201ENST00000402419 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
RPL35P2-201ENST00000402419 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
RPL35P2-201ENST00000402419 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
RPL35P2-201ENST00000402419 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
RPL35P2-201ENST00000402419 WRNQ14191 1432 aaPredicted RBP eCLIP17.56■□□□□ 0.4
RPL35P2-201ENST00000402419 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
RPL35P2-201ENST00000402419 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
RPL35P2-201ENST00000402419 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
RPL35P2-201ENST00000402419 PBRM1Q86U86 1689 aa17.51■□□□□ 0.39
RPL35P2-201ENST00000402419 GRIN2AQ12879 1464 aa17.43■□□□□ 0.38
RPL35P2-201ENST00000402419 ADAMTS12P58397 1594 aa17.41■□□□□ 0.38
RPL35P2-201ENST00000402419 NUP160Q12769 1436 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms