RNA–Protein interactions for RNA: ENST00000401096.2

CDK11A-207, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-207ENST00000401096 NISCHQ9Y2I1 1504 aa47.71■■■■■ 5.23
CDK11A-207ENST00000401096 ABCC9O60706 1549 aa43.29■■■■■ 4.52
CDK11A-207ENST00000401096 CCDC180Q9P1Z9 1646 aa43.08■■■■■ 4.49
CDK11A-207ENST00000401096 RB1CC1Q8TDY2 1594 aa41.15■■■■■ 4.18
CDK11A-207ENST00000401096 NACADO15069 1562 aa40.75■■■■■ 4.11
CDK11A-207ENST00000401096 DNAJC5BQ9UF47 199 aa40.73■■■■■ 4.11
CDK11A-207ENST00000401096 DCAF8L2P0C7V8 631 aa40.4■■■■■ 4.06
CDK11A-207ENST00000401096 UNC13AQ9UPW8 1703 aa40.19■■■■■ 4.02
CDK11A-207ENST00000401096 PABPN1Q86U42 306 aaKnown RBP eCLIP40.18■■■■■ 4.02
CDK11A-207ENST00000401096 MYO15BQ96JP2 1530 aa40.06■■■■■ 4
CDK11A-207ENST00000401096 BICRAQ9NZM4 1560 aa39.84■■■■□ 3.97
CDK11A-207ENST00000401096 ZCCHC6Q5VYS8 1495 aaKnown RBP39.49■■■■□ 3.91
CDK11A-207ENST00000401096 DCAF1Q9Y4B6 1507 aa39.42■■■■□ 3.9
CDK11A-207ENST00000401096 SHROOM4Q9ULL8 1493 aa39.41■■■■□ 3.9
CDK11A-207ENST00000401096 SCRIBQ14160 1630 aa39.18■■■■□ 3.86
CDK11A-207ENST00000401096 CC2D2AQ9P2K1 1620 aa39.11■■■■□ 3.85
CDK11A-207ENST00000401096 CECR2Q9BXF3 1484 aa39.05■■■■□ 3.84
CDK11A-207ENST00000401096 EIF4G1Q04637 1599 aaKnown RBP38.95■■■■□ 3.83
CDK11A-207ENST00000401096 DNAJC5Q9H3Z4 198 aa37.74■■■■□ 3.63
CDK11A-207ENST00000401096 NCAPD3P42695 1498 aa37.56■■■■□ 3.6
CDK11A-207ENST00000401096 CUX2O14529 1486 aa37.51■■■■□ 3.59
CDK11A-207ENST00000401096 ERCC6Q03468 1493 aa37.49■■■■□ 3.59
CDK11A-207ENST00000401096 ATAD2BQ9ULI0 1458 aa37.4■■■■□ 3.58
CDK11A-207ENST00000401096 SMARCA2P51531 1590 aa37.37■■■■□ 3.57
CDK11A-207ENST00000401096 SMARCA4P51532 1647 aa37.34■■■■□ 3.57
CDK11A-207ENST00000401096 HMGXB3Q12766 1538 aa37.33■■■■□ 3.57
CDK11A-207ENST00000401096 BAZ1AQ9NRL2 1556 aaPredicted RBP37.12■■■■□ 3.53
CDK11A-207ENST00000401096 BAZ1BQ9UIG0 1483 aaKnown RBP37.09■■■■□ 3.53
CDK11A-207ENST00000401096 NESP48681 1621 aa37.06■■■■□ 3.52
CDK11A-207ENST00000401096 PEG3Q9GZU2 1588 aa36.96■■■■□ 3.51
CDK11A-207ENST00000401096 LAMC3Q9Y6N6 1575 aa36.85■■■■□ 3.49
CDK11A-207ENST00000401096 THOC2Q8NI27 1593 aaKnown RBP36.83■■■■□ 3.49
CDK11A-207ENST00000401096 MROH2BQ7Z745 1585 aa36.73■■■■□ 3.47
CDK11A-207ENST00000401096 KIF21AQ7Z4S6 1674 aa36.67■■■■□ 3.46
CDK11A-207ENST00000401096 PDS5BQ9NTI5 1447 aa36.63■■■■□ 3.45
CDK11A-207ENST00000401096 CADPSQ9ULU8 1353 aa36.4■■■■□ 3.42
CDK11A-207ENST00000401096 MRC2Q9UBG0 1479 aa36.33■■■■□ 3.41
CDK11A-207ENST00000401096 WIZO95785 1651 aa36.32■■■■□ 3.4
CDK11A-207ENST00000401096 WDR62O43379 1518 aa36.25■■■■□ 3.39
CDK11A-207ENST00000401096 CEP164Q9UPV0 1460 aa36.15■■■■□ 3.38
CDK11A-207ENST00000401096 FANCD2Q9BXW9 1451 aa36.04■■■■□ 3.36
CDK11A-207ENST00000401096 TRIM41Q8WV44 630 aa36.01■■■■□ 3.36
CDK11A-207ENST00000401096 CFTRP13569 1480 aa35.92■■■■□ 3.34
CDK11A-207ENST00000401096 TOP2AP11388 1531 aaKnown RBP35.88■■■■□ 3.33
CDK11A-207ENST00000401096 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
CDK11A-207ENST00000401096 URB2Q14146 1524 aaKnown RBP35.72■■■■□ 3.31
CDK11A-207ENST00000401096 PRDM2Q13029 1718 aa35.69■■■■□ 3.3
CDK11A-207ENST00000401096 OSCARQ8IYS5 282 aa35.67■■■■□ 3.3
CDK11A-207ENST00000401096 IFT140Q96RY7 1462 aa35.41■■■■□ 3.26
CDK11A-207ENST00000401096 CCDC88BA6NC98 1476 aa35.39■■■■□ 3.26
CDK11A-207ENST00000401096 SUPT5HO00267 1087 aaKnown RBP35.35■■■■□ 3.25
CDK11A-207ENST00000401096 ZNF608Q9ULD9 1512 aaPredicted RBP35.32■■■■□ 3.24
CDK11A-207ENST00000401096 TOPBP1Q92547 1522 aa35.31■■■■□ 3.24
CDK11A-207ENST00000401096 RIMBP3CA6NJZ7 1639 aa35.29■■■■□ 3.24
CDK11A-207ENST00000401096 RIMBP3BA6NNM3 1639 aa35.29■■■■□ 3.24
CDK11A-207ENST00000401096 RIMBP3Q9UFD9 1639 aa35.29■■■■□ 3.24
CDK11A-207ENST00000401096 ABCC8Q09428 1581 aa35.25■■■■□ 3.23
CDK11A-207ENST00000401096 EIF4G3O43432 1585 aaKnown RBP35.21■■■■□ 3.23
CDK11A-207ENST00000401096 DNMBPQ6XZF7 1577 aa35.19■■■■□ 3.22
CDK11A-207ENST00000401096 ARHGEF11O15085 1522 aa35.15■■■■□ 3.22
CDK11A-207ENST00000401096 CHD1O14646 1710 aa35.02■■■■□ 3.2
CDK11A-207ENST00000401096 TARBP1Q13395 1621 aaKnown RBP35.01■■■■□ 3.19
CDK11A-207ENST00000401096 AQRO60306 1485 aaKnown RBP eCLIP34.95■■■■□ 3.191e-14■■■■■ 33.2
CDK11A-207ENST00000401096 POLA1P09884 1462 aaPredicted RBP34.92■■■■□ 3.18
CDK11A-207ENST00000401096 FBLN2P98095 1184 aa34.84■■■■□ 3.17
CDK11A-207ENST00000401096 CYB5RLQ6IPT4 315 aa34.84■■■■□ 3.17
CDK11A-207ENST00000401096 RAD54L2Q9Y4B4 1467 aa34.76■■■■□ 3.15
CDK11A-207ENST00000401096 ARAP1Q96P48 1450 aa34.75■■■■□ 3.15
CDK11A-207ENST00000401096 SOGA1O94964 1423 aa34.74■■■■□ 3.15
CDK11A-207ENST00000401096 WDR97A6NE52 1622 aa34.73■■■■□ 3.15
CDK11A-207ENST00000401096 TDRD9Q8NDG6 1382 aaKnown RBP34.69■■■■□ 3.14
CDK11A-207ENST00000401096 FGD5Q6ZNL6 1462 aa34.66■■■■□ 3.14
CDK11A-207ENST00000401096 SNAPC4Q5SXM2 1469 aa34.65■■■■□ 3.14
CDK11A-207ENST00000401096 TRHP20396 242 aaPredicted RBP34.63■■■■□ 3.13
CDK11A-207ENST00000401096 SYNJ1O43426 1573 aa34.58■■■■□ 3.13
CDK11A-207ENST00000401096 MAGI1Q96QZ7 1491 aaPredicted RBP34.58■■■■□ 3.13
CDK11A-207ENST00000401096 CLASP1Q7Z460 1538 aa34.55■■■■□ 3.12
CDK11A-207ENST00000401096 CUX1P39880 1505 aa34.55■■■■□ 3.12
CDK11A-207ENST00000401096 CHMP7Q8WUX9 453 aaPredicted RBP34.53■■■■□ 3.12
CDK11A-207ENST00000401096 GRIN2BQ13224 1484 aa34.52■■■■□ 3.12
CDK11A-207ENST00000401096 SYNJ2O15056 1496 aa34.45■■■■□ 3.1
CDK11A-207ENST00000401096 PBRM1Q86U86 1689 aa34.42■■■■□ 3.1
CDK11A-207ENST00000401096 GAPVD1Q14C86 1478 aa34.34■■■■□ 3.09
CDK11A-207ENST00000401096 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
CDK11A-207ENST00000401096 ABCA10Q8WWZ4 1543 aa34.25■■■■□ 3.07
CDK11A-207ENST00000401096 GRIN2AQ12879 1464 aa34.07■■■■□ 3.05
CDK11A-207ENST00000401096 WRNQ14191 1432 aaPredicted RBP eCLIP34.07■■■■□ 3.04
CDK11A-207ENST00000401096 ADAMTS12P58397 1594 aa34.04■■■■□ 3.04
CDK11A-207ENST00000401096 BIVM-ERCC5R4GMW8 1640 aa33.98■■■■□ 3.03
CDK11A-207ENST00000401096 TOP2BQ02880 1626 aa33.96■■■■□ 3.03
CDK11A-207ENST00000401096 CEP170Q5SW79 1584 aa33.95■■■■□ 3.03
CDK11A-207ENST00000401096 NUP160Q12769 1436 aa33.94■■■■□ 3.02
CDK11A-207ENST00000401096 ERCC6L2Q5T890 1561 aa33.94■■■■□ 3.02
CDK11A-207ENST00000401096 AEBP2Q6ZN18 517 aaPredicted RBP33.91■■■■□ 3.02
CDK11A-207ENST00000401096 FHAD1B1AJZ9 1412 aa33.89■■■■□ 3.02
CDK11A-207ENST00000401096 SHROOM2Q13796 1616 aa33.86■■■■□ 3.01
CDK11A-207ENST00000401096 ERICH3Q5RHP9 1530 aa33.84■■■■□ 3.01
CDK11A-207ENST00000401096 CHIC1Q5VXU3 224 aa33.72■■■□□ 2.99
CDK11A-207ENST00000401096 PRG4Q92954 1404 aaPredicted RBP33.65■■■□□ 2.98
CDK11A-207ENST00000401096 KIF13AQ9H1H9 1805 aa33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms