RNA–Protein interactions for RNA: ENST00000400940.3

RFKP1-201, Transcript of riboflavin kinase pseudogene 1, humanhuman

BASIC

Gene RFKP1, Length 428 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFKP1-201ENST00000400940 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
RFKP1-201ENST00000400940 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
RFKP1-201ENST00000400940 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
RFKP1-201ENST00000400940 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
RFKP1-201ENST00000400940 ABCC9O60706 1549 aa18.9■□□□□ 0.62
RFKP1-201ENST00000400940 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
RFKP1-201ENST00000400940 PHF23Q9BUL5 403 aaPredicted RBP18.21■□□□□ 0.51
RFKP1-201ENST00000400940 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
RFKP1-201ENST00000400940 NACADO15069 1562 aa18.1■□□□□ 0.49
RFKP1-201ENST00000400940 MYO15BQ96JP2 1530 aa17.97■□□□□ 0.47
RFKP1-201ENST00000400940 UNC13AQ9UPW8 1703 aa17.87■□□□□ 0.45
RFKP1-201ENST00000400940 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
RFKP1-201ENST00000400940 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
RFKP1-201ENST00000400940 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
RFKP1-201ENST00000400940 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
RFKP1-201ENST00000400940 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
RFKP1-201ENST00000400940 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
RFKP1-201ENST00000400940 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
RFKP1-201ENST00000400940 FOXD1Q16676 465 aa17.32■□□□□ 0.36
RFKP1-201ENST00000400940 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
RFKP1-201ENST00000400940 SCRIBQ14160 1630 aa17.22■□□□□ 0.35
RFKP1-201ENST00000400940 EIF4G1Q04637 1599 aaKnown RBP17.22■□□□□ 0.35
RFKP1-201ENST00000400940 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
RFKP1-201ENST00000400940 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
RFKP1-201ENST00000400940 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
RFKP1-201ENST00000400940 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
RFKP1-201ENST00000400940 SMARCA2P51531 1590 aa16.58■□□□□ 0.24
RFKP1-201ENST00000400940 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
RFKP1-201ENST00000400940 CUX2O14529 1486 aa16.56■□□□□ 0.24
RFKP1-201ENST00000400940 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
RFKP1-201ENST00000400940 ATAD2BQ9ULI0 1458 aa16.53■□□□□ 0.24
RFKP1-201ENST00000400940 MSH5O43196 834 aa16.5■□□□□ 0.23
RFKP1-201ENST00000400940 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
RFKP1-201ENST00000400940 DNAJC5Q9H3Z4 198 aa16.44■□□□□ 0.22
RFKP1-201ENST00000400940 ERCC6Q03468 1493 aa16.36■□□□□ 0.21
RFKP1-201ENST00000400940 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
RFKP1-201ENST00000400940 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
RFKP1-201ENST00000400940 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
RFKP1-201ENST00000400940 NESP48681 1621 aa16.23■□□□□ 0.19
RFKP1-201ENST00000400940 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.19
RFKP1-201ENST00000400940 KIF21AQ7Z4S6 1674 aa16.21■□□□□ 0.18
RFKP1-201ENST00000400940 PDS5BQ9NTI5 1447 aa16.13■□□□□ 0.17
RFKP1-201ENST00000400940 WDR62O43379 1518 aa16.08■□□□□ 0.16
RFKP1-201ENST00000400940 PIAS4Q8N2W9 510 aaPredicted RBP16.07■□□□□ 0.16
RFKP1-201ENST00000400940 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
RFKP1-201ENST00000400940 WIZO95785 1651 aa16.03■□□□□ 0.16
RFKP1-201ENST00000400940 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.15
RFKP1-201ENST00000400940 PRDM2Q13029 1718 aa15.98■□□□□ 0.15
RFKP1-201ENST00000400940 CFTRP13569 1480 aa15.93■□□□□ 0.14
RFKP1-201ENST00000400940 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
RFKP1-201ENST00000400940 TOP2AP11388 1531 aaKnown RBP15.93■□□□□ 0.14
RFKP1-201ENST00000400940 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
RFKP1-201ENST00000400940 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
RFKP1-201ENST00000400940 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
RFKP1-201ENST00000400940 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
RFKP1-201ENST00000400940 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
RFKP1-201ENST00000400940 ADRA2BP18089 450 aa15.65■□□□□ 0.1
RFKP1-201ENST00000400940 ABCC8Q09428 1581 aa15.65■□□□□ 0.1
RFKP1-201ENST00000400940 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
RFKP1-201ENST00000400940 CCDC88BA6NC98 1476 aa15.6■□□□□ 0.09
RFKP1-201ENST00000400940 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
RFKP1-201ENST00000400940 TOPBP1Q92547 1522 aa15.58■□□□□ 0.09
RFKP1-201ENST00000400940 EIF4G3O43432 1585 aaKnown RBP15.56■□□□□ 0.08
RFKP1-201ENST00000400940 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
RFKP1-201ENST00000400940 OSCARQ8IYS5 282 aa15.55■□□□□ 0.08
RFKP1-201ENST00000400940 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
RFKP1-201ENST00000400940 RIMBP3CA6NJZ7 1639 aa15.52■□□□□ 0.08
RFKP1-201ENST00000400940 RIMBP3BA6NNM3 1639 aa15.52■□□□□ 0.08
RFKP1-201ENST00000400940 RIMBP3Q9UFD9 1639 aa15.52■□□□□ 0.08
RFKP1-201ENST00000400940 ZNF608Q9ULD9 1512 aaPredicted RBP15.5■□□□□ 0.07
RFKP1-201ENST00000400940 CHD1O14646 1710 aa15.46■□□□□ 0.07
RFKP1-201ENST00000400940 ARHGEF11O15085 1522 aa15.45■□□□□ 0.06
RFKP1-201ENST00000400940 TRIM41Q8WV44 630 aa15.44■□□□□ 0.06
RFKP1-201ENST00000400940 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
RFKP1-201ENST00000400940 MAGI1Q96QZ7 1491 aaPredicted RBP15.31■□□□□ 0.04
RFKP1-201ENST00000400940 CLASP1Q7Z460 1538 aa15.31■□□□□ 0.04
RFKP1-201ENST00000400940 AQRO60306 1485 aaKnown RBP eCLIP15.3■□□□□ 0.04
RFKP1-201ENST00000400940 FGD5Q6ZNL6 1462 aa15.27■□□□□ 0.04
RFKP1-201ENST00000400940 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
RFKP1-201ENST00000400940 CUX1P39880 1505 aa15.27■□□□□ 0.03
RFKP1-201ENST00000400940 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
RFKP1-201ENST00000400940 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
RFKP1-201ENST00000400940 SOGA1O94964 1423 aa15.25■□□□□ 0.03
RFKP1-201ENST00000400940 ABCA5Q8WWZ7 1642 aa15.24■□□□□ 0.03
RFKP1-201ENST00000400940 GRIN2BQ13224 1484 aa15.22■□□□□ 0.03
RFKP1-201ENST00000400940 SNAPC4Q5SXM2 1469 aa15.22■□□□□ 0.03
RFKP1-201ENST00000400940 RAD54L2Q9Y4B4 1467 aa15.22■□□□□ 0.03
RFKP1-201ENST00000400940 SYNJ2O15056 1496 aa15.21■□□□□ 0.03
RFKP1-201ENST00000400940 ABCA10Q8WWZ4 1543 aa15.19■□□□□ 0.02
RFKP1-201ENST00000400940 BIVM-ERCC5R4GMW8 1640 aa15.15■□□□□ 0.02
RFKP1-201ENST00000400940 TDRD9Q8NDG6 1382 aaKnown RBP15.14■□□□□ 0.01
RFKP1-201ENST00000400940 GAPVD1Q14C86 1478 aa15.13■□□□□ 0.01
RFKP1-201ENST00000400940 TOP2BQ02880 1626 aa15.1■□□□□ 0.01
RFKP1-201ENST00000400940 ADAMTS12P58397 1594 aa15.09■□□□□ 0.01
RFKP1-201ENST00000400940 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
RFKP1-201ENST00000400940 SHROOM2Q13796 1616 aa15.07■□□□□ 0
RFKP1-201ENST00000400940 GRIN2AQ12879 1464 aa15.04■□□□□ -0
RFKP1-201ENST00000400940 NUP160Q12769 1436 aa15.04■□□□□ -0
RFKP1-201ENST00000400940 ERICH3Q5RHP9 1530 aa15.03■□□□□ -0
RFKP1-201ENST00000400940 WRNQ14191 1432 aaPredicted RBP eCLIP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms