RNA–Protein interactions for RNA: ENST00000399287.7

HPS5-204, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 1 (best)

Gene HPS5, Length 711 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-204ENST00000399287 NISCHQ9Y2I1 1504 aa28.6■■■□□ 2.17
HPS5-204ENST00000399287 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
HPS5-204ENST00000399287 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
HPS5-204ENST00000399287 ABCC9O60706 1549 aa25.95■■□□□ 1.74
HPS5-204ENST00000399287 CCDC180Q9P1Z9 1646 aa25.75■■□□□ 1.71
HPS5-204ENST00000399287 DNAJC5BQ9UF47 199 aa24.56■■□□□ 1.52
HPS5-204ENST00000399287 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
HPS5-204ENST00000399287 NACADO15069 1562 aa24.34■■□□□ 1.49
HPS5-204ENST00000399287 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
HPS5-204ENST00000399287 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
HPS5-204ENST00000399287 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
HPS5-204ENST00000399287 BICRAQ9NZM4 1560 aa23.97■■□□□ 1.43
HPS5-204ENST00000399287 MYO15BQ96JP2 1530 aa23.91■■□□□ 1.42
HPS5-204ENST00000399287 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
HPS5-204ENST00000399287 DCAF1Q9Y4B6 1507 aa23.57■■□□□ 1.36
HPS5-204ENST00000399287 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
HPS5-204ENST00000399287 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
HPS5-204ENST00000399287 SHROOM4Q9ULL8 1493 aa23.44■■□□□ 1.34
HPS5-204ENST00000399287 PHF23Q9BUL5 403 aaPredicted RBP23.38■■□□□ 1.33
HPS5-204ENST00000399287 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
HPS5-204ENST00000399287 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
HPS5-204ENST00000399287 SENP3Q9H4L4 574 aaPredicted RBP22.59■■□□□ 1.21
HPS5-204ENST00000399287 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
HPS5-204ENST00000399287 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
HPS5-204ENST00000399287 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
HPS5-204ENST00000399287 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
HPS5-204ENST00000399287 CUX2O14529 1486 aa22.35■■□□□ 1.17
HPS5-204ENST00000399287 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
HPS5-204ENST00000399287 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
HPS5-204ENST00000399287 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
HPS5-204ENST00000399287 NESP48681 1621 aa22.29■■□□□ 1.16
HPS5-204ENST00000399287 BAZ1AQ9NRL2 1556 aaPredicted RBP22.18■■□□□ 1.14
HPS5-204ENST00000399287 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
HPS5-204ENST00000399287 PEG3Q9GZU2 1588 aa22.14■■□□□ 1.13
HPS5-204ENST00000399287 THOC2Q8NI27 1593 aaKnown RBP22.1■■□□□ 1.13
HPS5-204ENST00000399287 MROH2BQ7Z745 1585 aa22.09■■□□□ 1.13
HPS5-204ENST00000399287 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
HPS5-204ENST00000399287 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
HPS5-204ENST00000399287 WIZO95785 1651 aa21.85■■□□□ 1.09
HPS5-204ENST00000399287 PDS5BQ9NTI5 1447 aa21.82■■□□□ 1.08
HPS5-204ENST00000399287 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
HPS5-204ENST00000399287 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
HPS5-204ENST00000399287 WDR62O43379 1518 aa21.7■■□□□ 1.06
HPS5-204ENST00000399287 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
HPS5-204ENST00000399287 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.04
HPS5-204ENST00000399287 FANCD2Q9BXW9 1451 aa21.56■■□□□ 1.04
HPS5-204ENST00000399287 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
HPS5-204ENST00000399287 CFTRP13569 1480 aa21.52■■□□□ 1.03
HPS5-204ENST00000399287 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
HPS5-204ENST00000399287 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
HPS5-204ENST00000399287 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
HPS5-204ENST00000399287 PRDM2Q13029 1718 aa21.36■■□□□ 1.01
HPS5-204ENST00000399287 OSCARQ8IYS5 282 aa21.27■■□□□ 1
HPS5-204ENST00000399287 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
HPS5-204ENST00000399287 ZNF608Q9ULD9 1512 aaPredicted RBP21.23■□□□□ 0.99
HPS5-204ENST00000399287 TOPBP1Q92547 1522 aa21.15■□□□□ 0.98
HPS5-204ENST00000399287 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
HPS5-204ENST00000399287 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
HPS5-204ENST00000399287 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
HPS5-204ENST00000399287 IFT140Q96RY7 1462 aa21.13■□□□□ 0.97
HPS5-204ENST00000399287 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
HPS5-204ENST00000399287 DNMBPQ6XZF7 1577 aa21.05■□□□□ 0.96
HPS5-204ENST00000399287 ARHGEF11O15085 1522 aa21.04■□□□□ 0.96
HPS5-204ENST00000399287 TARBP1Q13395 1621 aaKnown RBP21.02■□□□□ 0.96
HPS5-204ENST00000399287 CHD1O14646 1710 aa21.01■□□□□ 0.95
HPS5-204ENST00000399287 FOXD1Q16676 465 aa21■□□□□ 0.95
HPS5-204ENST00000399287 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
HPS5-204ENST00000399287 AQRO60306 1485 aaKnown RBP eCLIP20.97■□□□□ 0.95
HPS5-204ENST00000399287 POLA1P09884 1462 aaPredicted RBP20.93■□□□□ 0.94
HPS5-204ENST00000399287 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
HPS5-204ENST00000399287 ARAP1Q96P48 1450 aa20.83■□□□□ 0.93
HPS5-204ENST00000399287 CYB5RLQ6IPT4 315 aa20.83■□□□□ 0.93
HPS5-204ENST00000399287 TDRD9Q8NDG6 1382 aaKnown RBP20.8■□□□□ 0.92
HPS5-204ENST00000399287 FBLN2P98095 1184 aa20.79■□□□□ 0.92
HPS5-204ENST00000399287 SOGA1O94964 1423 aa20.78■□□□□ 0.92
HPS5-204ENST00000399287 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
HPS5-204ENST00000399287 CUX1P39880 1505 aa20.76■□□□□ 0.91
HPS5-204ENST00000399287 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
HPS5-204ENST00000399287 CLASP1Q7Z460 1538 aa20.72■□□□□ 0.91
HPS5-204ENST00000399287 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
HPS5-204ENST00000399287 PBRM1Q86U86 1689 aa20.63■□□□□ 0.89
HPS5-204ENST00000399287 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
HPS5-204ENST00000399287 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
HPS5-204ENST00000399287 SYNJ1O43426 1573 aa20.61■□□□□ 0.89
HPS5-204ENST00000399287 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
HPS5-204ENST00000399287 SYNJ2O15056 1496 aa20.58■□□□□ 0.89
HPS5-204ENST00000399287 CHMP7Q8WUX9 453 aaPredicted RBP20.58■□□□□ 0.89
HPS5-204ENST00000399287 ABCA5Q8WWZ7 1642 aa20.55■□□□□ 0.88
HPS5-204ENST00000399287 ADRA2BP18089 450 aa20.53■□□□□ 0.88
HPS5-204ENST00000399287 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
HPS5-204ENST00000399287 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
HPS5-204ENST00000399287 ABCA10Q8WWZ4 1543 aa20.49■□□□□ 0.87
HPS5-204ENST00000399287 SUPT5HO00267 1087 aaKnown RBP20.49■□□□□ 0.87
HPS5-204ENST00000399287 ERCC6L2Q5T890 1561 aa20.45■□□□□ 0.86
HPS5-204ENST00000399287 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
HPS5-204ENST00000399287 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
HPS5-204ENST00000399287 GRIN2AQ12879 1464 aa20.38■□□□□ 0.85
HPS5-204ENST00000399287 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
HPS5-204ENST00000399287 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
HPS5-204ENST00000399287 NUP160Q12769 1436 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms