RNA–Protein interactions for RNA: ENST00000399154.3

SMTNL1-201, Transcript of smoothelin like 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMTNL1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTNL1-201ENST00000399154 NISCHQ9Y2I1 1504 aa28.88■■■□□ 2.21
SMTNL1-201ENST00000399154 CCDC180Q9P1Z9 1646 aa25.64■■□□□ 1.69
SMTNL1-201ENST00000399154 ABCC9O60706 1549 aa25.15■■□□□ 1.62
SMTNL1-201ENST00000399154 DCAF8L2P0C7V8 631 aa24.14■■□□□ 1.45
SMTNL1-201ENST00000399154 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
SMTNL1-201ENST00000399154 ZCCHC6Q5VYS8 1495 aaKnown RBP24.08■■□□□ 1.45
SMTNL1-201ENST00000399154 NACADO15069 1562 aa24.07■■□□□ 1.44
SMTNL1-201ENST00000399154 MYO15BQ96JP2 1530 aa23.91■■□□□ 1.42
SMTNL1-201ENST00000399154 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.41
SMTNL1-201ENST00000399154 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
SMTNL1-201ENST00000399154 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
SMTNL1-201ENST00000399154 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
SMTNL1-201ENST00000399154 BICRAQ9NZM4 1560 aa23.45■■□□□ 1.34
SMTNL1-201ENST00000399154 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.29
SMTNL1-201ENST00000399154 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
SMTNL1-201ENST00000399154 EIF4G1Q04637 1599 aaKnown RBP22.82■■□□□ 1.24
SMTNL1-201ENST00000399154 CC2D2AQ9P2K1 1620 aa22.73■■□□□ 1.23
SMTNL1-201ENST00000399154 CECR2Q9BXF3 1484 aa22.56■■□□□ 1.2
SMTNL1-201ENST00000399154 SMARCA4P51532 1647 aa22.42■■□□□ 1.18
SMTNL1-201ENST00000399154 BAZ1AQ9NRL2 1556 aaPredicted RBP22.36■■□□□ 1.17
SMTNL1-201ENST00000399154 MROH2BQ7Z745 1585 aa22.31■■□□□ 1.16
SMTNL1-201ENST00000399154 ATAD2BQ9ULI0 1458 aa22.28■■□□□ 1.16
SMTNL1-201ENST00000399154 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
SMTNL1-201ENST00000399154 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
SMTNL1-201ENST00000399154 PEG3Q9GZU2 1588 aa22.17■■□□□ 1.14
SMTNL1-201ENST00000399154 HMGXB3Q12766 1538 aa22.14■■□□□ 1.13
SMTNL1-201ENST00000399154 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
SMTNL1-201ENST00000399154 WIZO95785 1651 aa22.08■■□□□ 1.12
SMTNL1-201ENST00000399154 RSF1Q96T23 1441 aaPredicted RBP22.02■■□□□ 1.12
SMTNL1-201ENST00000399154 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
SMTNL1-201ENST00000399154 NESP48681 1621 aa21.79■■□□□ 1.08
SMTNL1-201ENST00000399154 LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.06
SMTNL1-201ENST00000399154 ERCC6Q03468 1493 aa21.63■■□□□ 1.05
SMTNL1-201ENST00000399154 CADPSQ9ULU8 1353 aa21.58■■□□□ 1.05
SMTNL1-201ENST00000399154 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
SMTNL1-201ENST00000399154 KIF21AQ7Z4S6 1674 aa21.52■■□□□ 1.04
SMTNL1-201ENST00000399154 SUPT5HO00267 1087 aaKnown RBP21.51■■□□□ 1.03
SMTNL1-201ENST00000399154 CFTRP13569 1480 aa21.48■■□□□ 1.03
SMTNL1-201ENST00000399154 PDS5BQ9NTI5 1447 aa21.47■■□□□ 1.03
SMTNL1-201ENST00000399154 THOC2Q8NI27 1593 aaKnown RBP21.43■■□□□ 1.02
SMTNL1-201ENST00000399154 FANCD2Q9BXW9 1451 aa21.38■■□□□ 1.01
SMTNL1-201ENST00000399154 CUX2O14529 1486 aa21.35■■□□□ 1.01
SMTNL1-201ENST00000399154 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
SMTNL1-201ENST00000399154 PRDM2Q13029 1718 aa21.33■■□□□ 1
SMTNL1-201ENST00000399154 MRC2Q9UBG0 1479 aa21.3■■□□□ 1
SMTNL1-201ENST00000399154 WDR62O43379 1518 aa21.24■□□□□ 0.99
SMTNL1-201ENST00000399154 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
SMTNL1-201ENST00000399154 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
SMTNL1-201ENST00000399154 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
SMTNL1-201ENST00000399154 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
SMTNL1-201ENST00000399154 CUX1P39880 1505 aa20.92■□□□□ 0.94
SMTNL1-201ENST00000399154 POLA1P09884 1462 aaPredicted RBP20.87■□□□□ 0.93
SMTNL1-201ENST00000399154 IFT140Q96RY7 1462 aa20.86■□□□□ 0.93
SMTNL1-201ENST00000399154 ZNF608Q9ULD9 1512 aaPredicted RBP20.85■□□□□ 0.93
SMTNL1-201ENST00000399154 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
SMTNL1-201ENST00000399154 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
SMTNL1-201ENST00000399154 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
SMTNL1-201ENST00000399154 SYNJ1O43426 1573 aa20.76■□□□□ 0.91
SMTNL1-201ENST00000399154 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
SMTNL1-201ENST00000399154 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
SMTNL1-201ENST00000399154 SOGA1O94964 1423 aa20.75■□□□□ 0.91
SMTNL1-201ENST00000399154 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
SMTNL1-201ENST00000399154 AQRO60306 1485 aaKnown RBP eCLIP20.71■□□□□ 0.91
SMTNL1-201ENST00000399154 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
SMTNL1-201ENST00000399154 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
SMTNL1-201ENST00000399154 TDRD9Q8NDG6 1382 aaKnown RBP20.68■□□□□ 0.9
SMTNL1-201ENST00000399154 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
SMTNL1-201ENST00000399154 ABCA10Q8WWZ4 1543 aa20.59■□□□□ 0.89
SMTNL1-201ENST00000399154 ABCA5Q8WWZ7 1642 aa20.55■□□□□ 0.88
SMTNL1-201ENST00000399154 SNAPC4Q5SXM2 1469 aa20.53■□□□□ 0.88
SMTNL1-201ENST00000399154 PBRM1Q86U86 1689 aa20.52■□□□□ 0.88
SMTNL1-201ENST00000399154 GAPVD1Q14C86 1478 aa20.52■□□□□ 0.88
SMTNL1-201ENST00000399154 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
SMTNL1-201ENST00000399154 CHD1O14646 1710 aa20.49■□□□□ 0.87
SMTNL1-201ENST00000399154 FBLN2P98095 1184 aa20.44■□□□□ 0.86
SMTNL1-201ENST00000399154 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
SMTNL1-201ENST00000399154 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
SMTNL1-201ENST00000399154 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
SMTNL1-201ENST00000399154 ADAMTS12P58397 1594 aa20.36■□□□□ 0.85
SMTNL1-201ENST00000399154 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
SMTNL1-201ENST00000399154 ERICH3Q5RHP9 1530 aa20.33■□□□□ 0.85
SMTNL1-201ENST00000399154 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
SMTNL1-201ENST00000399154 FHAD1B1AJZ9 1412 aa20.26■□□□□ 0.83
SMTNL1-201ENST00000399154 GRIN2AQ12879 1464 aa20.26■□□□□ 0.83
SMTNL1-201ENST00000399154 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
SMTNL1-201ENST00000399154 CLASP1Q7Z460 1538 aa20.25■□□□□ 0.83
SMTNL1-201ENST00000399154 IGF1RP08069 1367 aa20.22■□□□□ 0.83
SMTNL1-201ENST00000399154 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
SMTNL1-201ENST00000399154 RIMBP3CA6NJZ7 1639 aa20.21■□□□□ 0.83
SMTNL1-201ENST00000399154 RIMBP3BA6NNM3 1639 aa20.21■□□□□ 0.83
SMTNL1-201ENST00000399154 RIMBP3Q9UFD9 1639 aa20.21■□□□□ 0.83
SMTNL1-201ENST00000399154 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
SMTNL1-201ENST00000399154 ARHGEF11O15085 1522 aa20.2■□□□□ 0.82
SMTNL1-201ENST00000399154 CUL7Q14999 1698 aa20.16■□□□□ 0.82
SMTNL1-201ENST00000399154 NUP160Q12769 1436 aa20.16■□□□□ 0.82
SMTNL1-201ENST00000399154 CARMIL1Q5VZK9 1371 aa20.09■□□□□ 0.81
SMTNL1-201ENST00000399154 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
SMTNL1-201ENST00000399154 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
SMTNL1-201ENST00000399154 ERCC6L2Q5T890 1561 aa20.04■□□□□ 0.8
SMTNL1-201ENST00000399154 SHROOM2Q13796 1616 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms