RNA–Protein interactions for RNA: ENST00000399147.8

NPIPB2-202, Transcript of nuclear pore complex interacting protein family, member B2, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NPIPB2, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB2-202ENST00000399147 NISCHQ9Y2I1 1504 aa27.73■■■□□ 2.03
NPIPB2-202ENST00000399147 ABCC9O60706 1549 aa25.53■■□□□ 1.68
NPIPB2-202ENST00000399147 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
NPIPB2-202ENST00000399147 DNAJC5BQ9UF47 199 aa24.34■■□□□ 1.49
NPIPB2-202ENST00000399147 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
NPIPB2-202ENST00000399147 RB1CC1Q8TDY2 1594 aa24.06■■□□□ 1.44
NPIPB2-202ENST00000399147 NACADO15069 1562 aa23.78■■□□□ 1.4
NPIPB2-202ENST00000399147 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
NPIPB2-202ENST00000399147 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
NPIPB2-202ENST00000399147 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
NPIPB2-202ENST00000399147 BICRAQ9NZM4 1560 aa23.36■■□□□ 1.33
NPIPB2-202ENST00000399147 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
NPIPB2-202ENST00000399147 MYO15BQ96JP2 1530 aa23.26■■□□□ 1.31
NPIPB2-202ENST00000399147 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
NPIPB2-202ENST00000399147 CC2D2AQ9P2K1 1620 aa23■■□□□ 1.27
NPIPB2-202ENST00000399147 SHROOM4Q9ULL8 1493 aa22.93■■□□□ 1.26
NPIPB2-202ENST00000399147 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
NPIPB2-202ENST00000399147 SCRIBQ14160 1630 aa22.85■■□□□ 1.25
NPIPB2-202ENST00000399147 EIF4G1Q04637 1599 aaKnown RBP22.84■■□□□ 1.25
NPIPB2-202ENST00000399147 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
NPIPB2-202ENST00000399147 DNAJC5Q9H3Z4 198 aa22.63■■□□□ 1.21
NPIPB2-202ENST00000399147 CUX2O14529 1486 aa22.1■■□□□ 1.13
NPIPB2-202ENST00000399147 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
NPIPB2-202ENST00000399147 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
NPIPB2-202ENST00000399147 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
NPIPB2-202ENST00000399147 NESP48681 1621 aa21.8■■□□□ 1.08
NPIPB2-202ENST00000399147 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
NPIPB2-202ENST00000399147 HMGXB3Q12766 1538 aa21.74■■□□□ 1.07
NPIPB2-202ENST00000399147 SMARCA4P51532 1647 aa21.71■■□□□ 1.07
NPIPB2-202ENST00000399147 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.05
NPIPB2-202ENST00000399147 THOC2Q8NI27 1593 aaKnown RBP21.6■■□□□ 1.05
NPIPB2-202ENST00000399147 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
NPIPB2-202ENST00000399147 BAZ1AQ9NRL2 1556 aaPredicted RBP21.55■■□□□ 1.04
NPIPB2-202ENST00000399147 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
NPIPB2-202ENST00000399147 KIF21AQ7Z4S6 1674 aa21.48■■□□□ 1.03
NPIPB2-202ENST00000399147 PEG3Q9GZU2 1588 aa21.46■■□□□ 1.03
NPIPB2-202ENST00000399147 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
NPIPB2-202ENST00000399147 MROH2BQ7Z745 1585 aa21.39■■□□□ 1.01
NPIPB2-202ENST00000399147 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
NPIPB2-202ENST00000399147 MRC2Q9UBG0 1479 aa21.27■■□□□ 1
NPIPB2-202ENST00000399147 WDR62O43379 1518 aa21.21■□□□□ 0.99
NPIPB2-202ENST00000399147 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
NPIPB2-202ENST00000399147 WIZO95785 1651 aa21.12■□□□□ 0.97
NPIPB2-202ENST00000399147 OSCARQ8IYS5 282 aa21.11■□□□□ 0.97
NPIPB2-202ENST00000399147 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
NPIPB2-202ENST00000399147 CFTRP13569 1480 aa20.95■□□□□ 0.94
NPIPB2-202ENST00000399147 URB2Q14146 1524 aaKnown RBP20.92■□□□□ 0.94
NPIPB2-202ENST00000399147 RIMBP3CA6NJZ7 1639 aa20.83■□□□□ 0.93
NPIPB2-202ENST00000399147 RIMBP3BA6NNM3 1639 aa20.83■□□□□ 0.93
NPIPB2-202ENST00000399147 RIMBP3Q9UFD9 1639 aa20.83■□□□□ 0.93
NPIPB2-202ENST00000399147 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
NPIPB2-202ENST00000399147 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
NPIPB2-202ENST00000399147 ZNF608Q9ULD9 1512 aaPredicted RBP20.74■□□□□ 0.91
NPIPB2-202ENST00000399147 ARHGEF11O15085 1522 aa20.72■□□□□ 0.91
NPIPB2-202ENST00000399147 IFT140Q96RY7 1462 aa20.7■□□□□ 0.9
NPIPB2-202ENST00000399147 PRDM2Q13029 1718 aa20.68■□□□□ 0.9
NPIPB2-202ENST00000399147 CYB5RLQ6IPT4 315 aa20.68■□□□□ 0.9
NPIPB2-202ENST00000399147 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
NPIPB2-202ENST00000399147 TOPBP1Q92547 1522 aa20.62■□□□□ 0.89
NPIPB2-202ENST00000399147 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
NPIPB2-202ENST00000399147 CCDC88BA6NC98 1476 aa20.59■□□□□ 0.89
NPIPB2-202ENST00000399147 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.88
NPIPB2-202ENST00000399147 FBLN2P98095 1184 aa20.55■□□□□ 0.88
NPIPB2-202ENST00000399147 ABCC8Q09428 1581 aa20.52■□□□□ 0.88
NPIPB2-202ENST00000399147 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.88
NPIPB2-202ENST00000399147 CHD1O14646 1710 aa20.52■□□□□ 0.88
NPIPB2-202ENST00000399147 ARAP1Q96P48 1450 aa20.49■□□□□ 0.87
NPIPB2-202ENST00000399147 DNMBPQ6XZF7 1577 aa20.48■□□□□ 0.87
NPIPB2-202ENST00000399147 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
NPIPB2-202ENST00000399147 TARBP1Q13395 1621 aaKnown RBP20.44■□□□□ 0.86
NPIPB2-202ENST00000399147 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
NPIPB2-202ENST00000399147 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
NPIPB2-202ENST00000399147 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
NPIPB2-202ENST00000399147 SOGA1O94964 1423 aa20.31■□□□□ 0.84
NPIPB2-202ENST00000399147 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
NPIPB2-202ENST00000399147 SNAPC4Q5SXM2 1469 aa20.28■□□□□ 0.84
NPIPB2-202ENST00000399147 CLASP1Q7Z460 1538 aa20.23■□□□□ 0.83
NPIPB2-202ENST00000399147 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
NPIPB2-202ENST00000399147 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
NPIPB2-202ENST00000399147 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
NPIPB2-202ENST00000399147 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
NPIPB2-202ENST00000399147 GRIN2BQ13224 1484 aa20.15■□□□□ 0.82
NPIPB2-202ENST00000399147 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
NPIPB2-202ENST00000399147 CUX1P39880 1505 aa20.11■□□□□ 0.81
NPIPB2-202ENST00000399147 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
NPIPB2-202ENST00000399147 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
NPIPB2-202ENST00000399147 ERCC6L2Q5T890 1561 aa19.94■□□□□ 0.78
NPIPB2-202ENST00000399147 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
NPIPB2-202ENST00000399147 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
NPIPB2-202ENST00000399147 GRIN2AQ12879 1464 aa19.89■□□□□ 0.77
NPIPB2-202ENST00000399147 CEP170Q5SW79 1584 aa19.85■□□□□ 0.77
NPIPB2-202ENST00000399147 NUP160Q12769 1436 aa19.82■□□□□ 0.76
NPIPB2-202ENST00000399147 ADAMTS12P58397 1594 aa19.8■□□□□ 0.76
NPIPB2-202ENST00000399147 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.76
NPIPB2-202ENST00000399147 KIF13AQ9H1H9 1805 aa19.76■□□□□ 0.75
NPIPB2-202ENST00000399147 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
NPIPB2-202ENST00000399147 FHAD1B1AJZ9 1412 aa19.76■□□□□ 0.75
NPIPB2-202ENST00000399147 PRG4Q92954 1404 aaPredicted RBP19.71■□□□□ 0.75
NPIPB2-202ENST00000399147 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
NPIPB2-202ENST00000399147 FAM69CQ0P6D2 419 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms