RNA–Protein interactions for RNA: ENST00000398997.2

MED18-202, Transcript of mediator complex subunit 18, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MED18, Length 1,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED18-202ENST00000398997 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
MED18-202ENST00000398997 ABCC9O60706 1549 aa23.33■■□□□ 1.33
MED18-202ENST00000398997 CCDC180Q9P1Z9 1646 aa22.69■■□□□ 1.22
MED18-202ENST00000398997 DNAJC5BQ9UF47 199 aa22.69■■□□□ 1.22
MED18-202ENST00000398997 AEBP2Q6ZN18 517 aaPredicted RBP21.82■■□□□ 1.08
MED18-202ENST00000398997 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
MED18-202ENST00000398997 PABPN1Q86U42 306 aaKnown RBP eCLIP21.55■■□□□ 1.04
MED18-202ENST00000398997 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
MED18-202ENST00000398997 NACADO15069 1562 aa21.5■■□□□ 1.03
MED18-202ENST00000398997 DCAF8L2P0C7V8 631 aa21.37■■□□□ 1.01
MED18-202ENST00000398997 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
MED18-202ENST00000398997 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
MED18-202ENST00000398997 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.98
MED18-202ENST00000398997 CECR2Q9BXF3 1484 aa21.11■□□□□ 0.97
MED18-202ENST00000398997 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
MED18-202ENST00000398997 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
MED18-202ENST00000398997 DCAF1Q9Y4B6 1507 aa20.97■□□□□ 0.95
MED18-202ENST00000398997 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
MED18-202ENST00000398997 EIF4G1Q04637 1599 aaKnown RBP20.72■□□□□ 0.91
MED18-202ENST00000398997 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
MED18-202ENST00000398997 CUX2O14529 1486 aa20.49■□□□□ 0.87
MED18-202ENST00000398997 CHIC1Q5VXU3 224 aa20.37■□□□□ 0.85
MED18-202ENST00000398997 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
MED18-202ENST00000398997 ERCC6Q03468 1493 aa20.23■□□□□ 0.83
MED18-202ENST00000398997 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
MED18-202ENST00000398997 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
MED18-202ENST00000398997 SMARCA4P51532 1647 aa19.77■□□□□ 0.76
MED18-202ENST00000398997 NESP48681 1621 aa19.76■□□□□ 0.75
MED18-202ENST00000398997 THOC2Q8NI27 1593 aaKnown RBP19.75■□□□□ 0.75
MED18-202ENST00000398997 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
MED18-202ENST00000398997 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
MED18-202ENST00000398997 BAZ1AQ9NRL2 1556 aaPredicted RBP19.65■□□□□ 0.74
MED18-202ENST00000398997 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
MED18-202ENST00000398997 MROH2BQ7Z745 1585 aa19.59■□□□□ 0.73
MED18-202ENST00000398997 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.72
MED18-202ENST00000398997 KIF21AQ7Z4S6 1674 aa19.47■□□□□ 0.71
MED18-202ENST00000398997 LAMC3Q9Y6N6 1575 aa19.44■□□□□ 0.7
MED18-202ENST00000398997 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
MED18-202ENST00000398997 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
MED18-202ENST00000398997 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
MED18-202ENST00000398997 WIZO95785 1651 aa19.3■□□□□ 0.68
MED18-202ENST00000398997 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
MED18-202ENST00000398997 RIMBP3CA6NJZ7 1639 aa19.26■□□□□ 0.67
MED18-202ENST00000398997 RIMBP3BA6NNM3 1639 aa19.26■□□□□ 0.67
MED18-202ENST00000398997 RIMBP3Q9UFD9 1639 aa19.26■□□□□ 0.67
MED18-202ENST00000398997 WDR62O43379 1518 aa19.25■□□□□ 0.67
MED18-202ENST00000398997 RSF1Q96T23 1441 aaPredicted RBP19.2■□□□□ 0.66
MED18-202ENST00000398997 TRHP20396 242 aaPredicted RBP19.13■□□□□ 0.65
MED18-202ENST00000398997 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
MED18-202ENST00000398997 CFTRP13569 1480 aa19.09■□□□□ 0.65
MED18-202ENST00000398997 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
MED18-202ENST00000398997 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
MED18-202ENST00000398997 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
MED18-202ENST00000398997 CYB5RLQ6IPT4 315 aa19■□□□□ 0.63
MED18-202ENST00000398997 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
MED18-202ENST00000398997 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
MED18-202ENST00000398997 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
MED18-202ENST00000398997 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
MED18-202ENST00000398997 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
MED18-202ENST00000398997 ZNF608Q9ULD9 1512 aaPredicted RBP18.73■□□□□ 0.59
MED18-202ENST00000398997 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
MED18-202ENST00000398997 IFT140Q96RY7 1462 aa18.67■□□□□ 0.58
MED18-202ENST00000398997 CHD1O14646 1710 aa18.63■□□□□ 0.57
MED18-202ENST00000398997 ILDR1Q86SU0 546 aaPredicted RBP18.62■□□□□ 0.57
MED18-202ENST00000398997 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
MED18-202ENST00000398997 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
MED18-202ENST00000398997 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
MED18-202ENST00000398997 TARBP1Q13395 1621 aaKnown RBP18.54■□□□□ 0.56
MED18-202ENST00000398997 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.56
MED18-202ENST00000398997 FBLN2P98095 1184 aa18.52■□□□□ 0.56
MED18-202ENST00000398997 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.55
MED18-202ENST00000398997 RAD54L2Q9Y4B4 1467 aa18.47■□□□□ 0.55
MED18-202ENST00000398997 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
MED18-202ENST00000398997 SOGA1O94964 1423 aa18.41■□□□□ 0.54
MED18-202ENST00000398997 CUX1P39880 1505 aa18.4■□□□□ 0.54
MED18-202ENST00000398997 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.53
MED18-202ENST00000398997 FGD5Q6ZNL6 1462 aa18.38■□□□□ 0.53
MED18-202ENST00000398997 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
MED18-202ENST00000398997 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
MED18-202ENST00000398997 SYNJ1O43426 1573 aa18.29■□□□□ 0.52
MED18-202ENST00000398997 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.52
MED18-202ENST00000398997 WDR97A6NE52 1622 aa18.27■□□□□ 0.51
MED18-202ENST00000398997 SUPT5HO00267 1087 aaKnown RBP18.26■□□□□ 0.51
MED18-202ENST00000398997 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
MED18-202ENST00000398997 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
MED18-202ENST00000398997 CHMP7Q8WUX9 453 aaPredicted RBP18.21■□□□□ 0.51
MED18-202ENST00000398997 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
MED18-202ENST00000398997 SYNJ2O15056 1496 aa18.18■□□□□ 0.5
MED18-202ENST00000398997 KDM4FA0A1W2PPD8 638 aa18.15■□□□□ 0.5
MED18-202ENST00000398997 ABCA5Q8WWZ7 1642 aa18.13■□□□□ 0.49
MED18-202ENST00000398997 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
MED18-202ENST00000398997 PBRM1Q86U86 1689 aa18.09■□□□□ 0.49
MED18-202ENST00000398997 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.49
MED18-202ENST00000398997 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
MED18-202ENST00000398997 ERCC6L2Q5T890 1561 aa18.04■□□□□ 0.48
MED18-202ENST00000398997 BIVM-ERCC5R4GMW8 1640 aa18.03■□□□□ 0.48
MED18-202ENST00000398997 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
MED18-202ENST00000398997 NUP160Q12769 1436 aa18■□□□□ 0.47
MED18-202ENST00000398997 ADAMTS12P58397 1594 aa17.99■□□□□ 0.47
MED18-202ENST00000398997 CEP170Q5SW79 1584 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms