RNA–Protein interactions for RNA: ENST00000398065.3

PMS2P5-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 5, humanhuman

BASIC

Gene PMS2P5, Length 516 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P5-201ENST00000398065 NISCHQ9Y2I1 1504 aa22.25■■□□□ 1.15
PMS2P5-201ENST00000398065 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
PMS2P5-201ENST00000398065 ABCC9O60706 1549 aa19.81■□□□□ 0.76
PMS2P5-201ENST00000398065 RB1CC1Q8TDY2 1594 aa18.92■□□□□ 0.62
PMS2P5-201ENST00000398065 NACADO15069 1562 aa18.78■□□□□ 0.6
PMS2P5-201ENST00000398065 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
PMS2P5-201ENST00000398065 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
PMS2P5-201ENST00000398065 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
PMS2P5-201ENST00000398065 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
PMS2P5-201ENST00000398065 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.54
PMS2P5-201ENST00000398065 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
PMS2P5-201ENST00000398065 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
PMS2P5-201ENST00000398065 DCAF1Q9Y4B6 1507 aa18.34■□□□□ 0.53
PMS2P5-201ENST00000398065 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
PMS2P5-201ENST00000398065 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
PMS2P5-201ENST00000398065 SHROOM4Q9ULL8 1493 aa18.03■□□□□ 0.48
PMS2P5-201ENST00000398065 CC2D2AQ9P2K1 1620 aa17.92■□□□□ 0.46
PMS2P5-201ENST00000398065 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
PMS2P5-201ENST00000398065 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
PMS2P5-201ENST00000398065 SMARCA4P51532 1647 aa17.39■□□□□ 0.37
PMS2P5-201ENST00000398065 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
PMS2P5-201ENST00000398065 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
PMS2P5-201ENST00000398065 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
PMS2P5-201ENST00000398065 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
PMS2P5-201ENST00000398065 CHIC1Q5VXU3 224 aa17.24■□□□□ 0.35
PMS2P5-201ENST00000398065 HMGXB3Q12766 1538 aa17.22■□□□□ 0.35
PMS2P5-201ENST00000398065 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
PMS2P5-201ENST00000398065 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
PMS2P5-201ENST00000398065 PEG3Q9GZU2 1588 aa17.14■□□□□ 0.33
PMS2P5-201ENST00000398065 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
PMS2P5-201ENST00000398065 NESP48681 1621 aa17.06■□□□□ 0.32
PMS2P5-201ENST00000398065 WIZO95785 1651 aa17.05■□□□□ 0.32
PMS2P5-201ENST00000398065 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
PMS2P5-201ENST00000398065 CUX2O14529 1486 aa16.95■□□□□ 0.3
PMS2P5-201ENST00000398065 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
PMS2P5-201ENST00000398065 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
PMS2P5-201ENST00000398065 RSF1Q96T23 1441 aaPredicted RBP16.82■□□□□ 0.28
PMS2P5-201ENST00000398065 PDS5BQ9NTI5 1447 aa16.8■□□□□ 0.28
PMS2P5-201ENST00000398065 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.28
PMS2P5-201ENST00000398065 TOP2AP11388 1531 aaKnown RBP16.77■□□□□ 0.28
PMS2P5-201ENST00000398065 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
PMS2P5-201ENST00000398065 PRDM2Q13029 1718 aa16.68■□□□□ 0.26
PMS2P5-201ENST00000398065 MRC2Q9UBG0 1479 aa16.67■□□□□ 0.26
PMS2P5-201ENST00000398065 CEP164Q9UPV0 1460 aa16.66■□□□□ 0.26
PMS2P5-201ENST00000398065 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
PMS2P5-201ENST00000398065 WDR62O43379 1518 aa16.63■□□□□ 0.25
PMS2P5-201ENST00000398065 CFTRP13569 1480 aa16.62■□□□□ 0.25
PMS2P5-201ENST00000398065 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
PMS2P5-201ENST00000398065 URB2Q14146 1524 aaKnown RBP16.5■□□□□ 0.23
PMS2P5-201ENST00000398065 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
PMS2P5-201ENST00000398065 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
PMS2P5-201ENST00000398065 ABCC8Q09428 1581 aa16.29■□□□□ 0.2
PMS2P5-201ENST00000398065 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
PMS2P5-201ENST00000398065 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
PMS2P5-201ENST00000398065 ZNF608Q9ULD9 1512 aaPredicted RBP16.27■□□□□ 0.2
PMS2P5-201ENST00000398065 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
PMS2P5-201ENST00000398065 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
PMS2P5-201ENST00000398065 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
PMS2P5-201ENST00000398065 CHD1O14646 1710 aa16.18■□□□□ 0.18
PMS2P5-201ENST00000398065 POLA1P09884 1462 aaPredicted RBP16.17■□□□□ 0.18
PMS2P5-201ENST00000398065 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
PMS2P5-201ENST00000398065 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
PMS2P5-201ENST00000398065 RAD54L2Q9Y4B4 1467 aa16.14■□□□□ 0.17
PMS2P5-201ENST00000398065 CUX1P39880 1505 aa16.13■□□□□ 0.17
PMS2P5-201ENST00000398065 FGD5Q6ZNL6 1462 aa16.12■□□□□ 0.17
PMS2P5-201ENST00000398065 SOGA1O94964 1423 aa16.1■□□□□ 0.17
PMS2P5-201ENST00000398065 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
PMS2P5-201ENST00000398065 RIMBP3CA6NJZ7 1639 aa16.07■□□□□ 0.16
PMS2P5-201ENST00000398065 RIMBP3BA6NNM3 1639 aa16.07■□□□□ 0.16
PMS2P5-201ENST00000398065 RIMBP3Q9UFD9 1639 aa16.07■□□□□ 0.16
PMS2P5-201ENST00000398065 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
PMS2P5-201ENST00000398065 FBLN2P98095 1184 aa16.04■□□□□ 0.16
PMS2P5-201ENST00000398065 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
PMS2P5-201ENST00000398065 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
PMS2P5-201ENST00000398065 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
PMS2P5-201ENST00000398065 BIVM-ERCC5R4GMW8 1640 aa15.96■□□□□ 0.15
PMS2P5-201ENST00000398065 GRIN2BQ13224 1484 aa15.94■□□□□ 0.14
PMS2P5-201ENST00000398065 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
PMS2P5-201ENST00000398065 MAGI1Q96QZ7 1491 aaPredicted RBP15.93■□□□□ 0.14
PMS2P5-201ENST00000398065 TOP2BQ02880 1626 aa15.93■□□□□ 0.14
PMS2P5-201ENST00000398065 ABCA5Q8WWZ7 1642 aa15.93■□□□□ 0.14
PMS2P5-201ENST00000398065 GAPVD1Q14C86 1478 aa15.92■□□□□ 0.14
PMS2P5-201ENST00000398065 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
PMS2P5-201ENST00000398065 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
PMS2P5-201ENST00000398065 WRNQ14191 1432 aaPredicted RBP eCLIP15.9■□□□□ 0.14
PMS2P5-201ENST00000398065 SYNJ2O15056 1496 aa15.87■□□□□ 0.13
PMS2P5-201ENST00000398065 CLASP1Q7Z460 1538 aa15.86■□□□□ 0.13
PMS2P5-201ENST00000398065 CYB5RLQ6IPT4 315 aa15.84■□□□□ 0.13
PMS2P5-201ENST00000398065 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
PMS2P5-201ENST00000398065 ADAMTS12P58397 1594 aa15.8■□□□□ 0.12
PMS2P5-201ENST00000398065 GRIN2AQ12879 1464 aa15.75■□□□□ 0.11
PMS2P5-201ENST00000398065 CEP170Q5SW79 1584 aa15.73■□□□□ 0.11
PMS2P5-201ENST00000398065 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
PMS2P5-201ENST00000398065 FHAD1B1AJZ9 1412 aa15.7■□□□□ 0.1
PMS2P5-201ENST00000398065 ERCC6L2Q5T890 1561 aa15.66■□□□□ 0.1
PMS2P5-201ENST00000398065 TRHP20396 242 aaPredicted RBP15.66■□□□□ 0.1
PMS2P5-201ENST00000398065 NUP160Q12769 1436 aa15.65■□□□□ 0.1
PMS2P5-201ENST00000398065 SHROOM2Q13796 1616 aa15.64■□□□□ 0.09
PMS2P5-201ENST00000398065 CUL7Q14999 1698 aa15.6■□□□□ 0.09
PMS2P5-201ENST00000398065 SENP3Q9H4L4 574 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms