RNA–Protein interactions for RNA: ENST00000397468.5

RFPL3-202, Transcript of ret finger protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFPL3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-202ENST00000397468 AEBP2Q6ZN18 517 aaPredicted RBP24.75■■□□□ 1.55
RFPL3-202ENST00000397468 NISCHQ9Y2I1 1504 aa24.06■■□□□ 1.44
RFPL3-202ENST00000397468 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
RFPL3-202ENST00000397468 CCDC180Q9P1Z9 1646 aa21.66■■□□□ 1.06
RFPL3-202ENST00000397468 ABCC9O60706 1549 aa21.63■■□□□ 1.05
RFPL3-202ENST00000397468 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
RFPL3-202ENST00000397468 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
RFPL3-202ENST00000397468 RB1CC1Q8TDY2 1594 aa20.62■□□□□ 0.89
RFPL3-202ENST00000397468 DCAF8L2P0C7V8 631 aa20.44■□□□□ 0.86
RFPL3-202ENST00000397468 NACADO15069 1562 aa20.43■□□□□ 0.86
RFPL3-202ENST00000397468 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
RFPL3-202ENST00000397468 PABPN1Q86U42 306 aaKnown RBP eCLIP20.11■□□□□ 0.81
RFPL3-202ENST00000397468 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
RFPL3-202ENST00000397468 MYO15BQ96JP2 1530 aa20.09■□□□□ 0.81
RFPL3-202ENST00000397468 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
RFPL3-202ENST00000397468 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
RFPL3-202ENST00000397468 DCAF1Q9Y4B6 1507 aa19.85■□□□□ 0.77
RFPL3-202ENST00000397468 FOXD1Q16676 465 aa19.81■□□□□ 0.76
RFPL3-202ENST00000397468 SCRIBQ14160 1630 aa19.79■□□□□ 0.76
RFPL3-202ENST00000397468 SHROOM4Q9ULL8 1493 aa19.69■□□□□ 0.74
RFPL3-202ENST00000397468 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
RFPL3-202ENST00000397468 EIF4G1Q04637 1599 aaKnown RBP19.49■□□□□ 0.71
RFPL3-202ENST00000397468 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
RFPL3-202ENST00000397468 POTEDQ86YR6 584 aa18.95■□□□□ 0.62
RFPL3-202ENST00000397468 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
RFPL3-202ENST00000397468 NCAPD3P42695 1498 aa18.79■□□□□ 0.6
RFPL3-202ENST00000397468 SMARCA2P51531 1590 aa18.79■□□□□ 0.6
RFPL3-202ENST00000397468 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
RFPL3-202ENST00000397468 MSH5O43196 834 aa18.75■□□□□ 0.59
RFPL3-202ENST00000397468 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
RFPL3-202ENST00000397468 BAZ1AQ9NRL2 1556 aaPredicted RBP18.74■□□□□ 0.59
RFPL3-202ENST00000397468 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
RFPL3-202ENST00000397468 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
RFPL3-202ENST00000397468 BAZ1BQ9UIG0 1483 aaKnown RBP18.68■□□□□ 0.58
RFPL3-202ENST00000397468 CUX2O14529 1486 aa18.62■□□□□ 0.57
RFPL3-202ENST00000397468 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
RFPL3-202ENST00000397468 NESP48681 1621 aa18.55■□□□□ 0.56
RFPL3-202ENST00000397468 MROH2BQ7Z745 1585 aa18.54■□□□□ 0.56
RFPL3-202ENST00000397468 DNAJC5Q9H3Z4 198 aa18.5■□□□□ 0.55
RFPL3-202ENST00000397468 LAMC3Q9Y6N6 1575 aa18.47■□□□□ 0.55
RFPL3-202ENST00000397468 PIAS4Q8N2W9 510 aaPredicted RBP18.42■□□□□ 0.54
RFPL3-202ENST00000397468 KIF21AQ7Z4S6 1674 aa18.39■□□□□ 0.53
RFPL3-202ENST00000397468 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
RFPL3-202ENST00000397468 WIZO95785 1651 aa18.38■□□□□ 0.53
RFPL3-202ENST00000397468 PDS5BQ9NTI5 1447 aa18.35■□□□□ 0.53
RFPL3-202ENST00000397468 CADPSQ9ULU8 1353 aa18.26■□□□□ 0.51
RFPL3-202ENST00000397468 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
RFPL3-202ENST00000397468 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
RFPL3-202ENST00000397468 ADRA2BP18089 450 aa18.18■□□□□ 0.5
RFPL3-202ENST00000397468 CEP164Q9UPV0 1460 aa18.15■□□□□ 0.5
RFPL3-202ENST00000397468 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
RFPL3-202ENST00000397468 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.49
RFPL3-202ENST00000397468 WDR62O43379 1518 aa18.13■□□□□ 0.49
RFPL3-202ENST00000397468 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
RFPL3-202ENST00000397468 CFTRP13569 1480 aa18.04■□□□□ 0.48
RFPL3-202ENST00000397468 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
RFPL3-202ENST00000397468 URB2Q14146 1524 aaKnown RBP17.92■□□□□ 0.46
RFPL3-202ENST00000397468 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
RFPL3-202ENST00000397468 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
RFPL3-202ENST00000397468 OSCARQ8IYS5 282 aa17.77■□□□□ 0.44
RFPL3-202ENST00000397468 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
RFPL3-202ENST00000397468 TOPBP1Q92547 1522 aa17.75■□□□□ 0.43
RFPL3-202ENST00000397468 ABCC8Q09428 1581 aa17.73■□□□□ 0.43
RFPL3-202ENST00000397468 DNMBPQ6XZF7 1577 aa17.72■□□□□ 0.43
RFPL3-202ENST00000397468 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
RFPL3-202ENST00000397468 EIF4G3O43432 1585 aaKnown RBP17.67■□□□□ 0.42
RFPL3-202ENST00000397468 CHD1O14646 1710 aa17.58■□□□□ 0.4
RFPL3-202ENST00000397468 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.4
RFPL3-202ENST00000397468 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.4
RFPL3-202ENST00000397468 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.4
RFPL3-202ENST00000397468 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.4
RFPL3-202ENST00000397468 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
RFPL3-202ENST00000397468 AQRO60306 1485 aaKnown RBP eCLIP17.55■□□□□ 0.4
RFPL3-202ENST00000397468 FBLN2P98095 1184 aa17.53■□□□□ 0.4
RFPL3-202ENST00000397468 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
RFPL3-202ENST00000397468 SOGA1O94964 1423 aa17.49■□□□□ 0.39
RFPL3-202ENST00000397468 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
RFPL3-202ENST00000397468 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
RFPL3-202ENST00000397468 FGD5Q6ZNL6 1462 aa17.48■□□□□ 0.39
RFPL3-202ENST00000397468 WDR97A6NE52 1622 aa17.44■□□□□ 0.38
RFPL3-202ENST00000397468 TDRD9Q8NDG6 1382 aaKnown RBP17.44■□□□□ 0.38
RFPL3-202ENST00000397468 CUX1P39880 1505 aa17.43■□□□□ 0.38
RFPL3-202ENST00000397468 SNAPC4Q5SXM2 1469 aa17.41■□□□□ 0.38
RFPL3-202ENST00000397468 PBRM1Q86U86 1689 aa17.37■□□□□ 0.37
RFPL3-202ENST00000397468 CYB5RLQ6IPT4 315 aa17.37■□□□□ 0.37
RFPL3-202ENST00000397468 CHMP7Q8WUX9 453 aaPredicted RBP17.36■□□□□ 0.37
RFPL3-202ENST00000397468 GRIN2BQ13224 1484 aa17.35■□□□□ 0.37
RFPL3-202ENST00000397468 MAGI1Q96QZ7 1491 aaPredicted RBP17.35■□□□□ 0.37
RFPL3-202ENST00000397468 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
RFPL3-202ENST00000397468 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
RFPL3-202ENST00000397468 ARAP1Q96P48 1450 aa17.3■□□□□ 0.36
RFPL3-202ENST00000397468 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
RFPL3-202ENST00000397468 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
RFPL3-202ENST00000397468 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
RFPL3-202ENST00000397468 ABCA5Q8WWZ7 1642 aa17.25■□□□□ 0.35
RFPL3-202ENST00000397468 TRHP20396 242 aaPredicted RBP17.25■□□□□ 0.35
RFPL3-202ENST00000397468 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.35
RFPL3-202ENST00000397468 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
RFPL3-202ENST00000397468 TOP2BQ02880 1626 aa17.19■□□□□ 0.34
RFPL3-202ENST00000397468 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms