RNA–Protein interactions for RNA: ENST00000397006.2

PRKAA1-203, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 3

Gene PRKAA1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-203ENST00000397006 NISCHQ9Y2I1 1504 aa21.78■■□□□ 1.08
PRKAA1-203ENST00000397006 CCDC180Q9P1Z9 1646 aa19.51■□□□□ 0.71
PRKAA1-203ENST00000397006 AEBP2Q6ZN18 517 aaPredicted RBP19.4■□□□□ 0.7
PRKAA1-203ENST00000397006 ABCC9O60706 1549 aa19.26■□□□□ 0.67
PRKAA1-203ENST00000397006 CHIC1Q5VXU3 224 aa18.65■□□□□ 0.58
PRKAA1-203ENST00000397006 RB1CC1Q8TDY2 1594 aa18.51■□□□□ 0.55
PRKAA1-203ENST00000397006 NACADO15069 1562 aa18.42■□□□□ 0.54
PRKAA1-203ENST00000397006 DCAF8L2P0C7V8 631 aa18.39■□□□□ 0.53
PRKAA1-203ENST00000397006 MYO15BQ96JP2 1530 aa18.24■□□□□ 0.51
PRKAA1-203ENST00000397006 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
PRKAA1-203ENST00000397006 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
PRKAA1-203ENST00000397006 PABPN1Q86U42 306 aaKnown RBP eCLIP17.95■□□□□ 0.46
PRKAA1-203ENST00000397006 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
PRKAA1-203ENST00000397006 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
PRKAA1-203ENST00000397006 SHROOM4Q9ULL8 1493 aa17.8■□□□□ 0.44
PRKAA1-203ENST00000397006 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
PRKAA1-203ENST00000397006 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
PRKAA1-203ENST00000397006 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
PRKAA1-203ENST00000397006 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
PRKAA1-203ENST00000397006 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
PRKAA1-203ENST00000397006 NCAPD3P42695 1498 aa16.98■□□□□ 0.31
PRKAA1-203ENST00000397006 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
PRKAA1-203ENST00000397006 BAZ1AQ9NRL2 1556 aaPredicted RBP16.95■□□□□ 0.3
PRKAA1-203ENST00000397006 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
PRKAA1-203ENST00000397006 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
PRKAA1-203ENST00000397006 HMGXB3Q12766 1538 aa16.87■□□□□ 0.29
PRKAA1-203ENST00000397006 BAZ1BQ9UIG0 1483 aaKnown RBP16.82■□□□□ 0.28
PRKAA1-203ENST00000397006 PEG3Q9GZU2 1588 aa16.79■□□□□ 0.28
PRKAA1-203ENST00000397006 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
PRKAA1-203ENST00000397006 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
PRKAA1-203ENST00000397006 CUX2O14529 1486 aa16.62■□□□□ 0.25
PRKAA1-203ENST00000397006 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
PRKAA1-203ENST00000397006 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
PRKAA1-203ENST00000397006 NESP48681 1621 aa16.54■□□□□ 0.24
PRKAA1-203ENST00000397006 WIZO95785 1651 aa16.53■□□□□ 0.24
PRKAA1-203ENST00000397006 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
PRKAA1-203ENST00000397006 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
PRKAA1-203ENST00000397006 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
PRKAA1-203ENST00000397006 TOP2AP11388 1531 aaKnown RBP16.41■□□□□ 0.22
PRKAA1-203ENST00000397006 SENP3Q9H4L4 574 aaPredicted RBP16.41■□□□□ 0.22
PRKAA1-203ENST00000397006 THOC2Q8NI27 1593 aaKnown RBP16.36■□□□□ 0.21
PRKAA1-203ENST00000397006 DNAJC5Q9H3Z4 198 aa16.36■□□□□ 0.21
PRKAA1-203ENST00000397006 KIF21AQ7Z4S6 1674 aa16.35■□□□□ 0.21
PRKAA1-203ENST00000397006 MRC2Q9UBG0 1479 aa16.32■□□□□ 0.2
PRKAA1-203ENST00000397006 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
PRKAA1-203ENST00000397006 CFTRP13569 1480 aa16.3■□□□□ 0.2
PRKAA1-203ENST00000397006 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
PRKAA1-203ENST00000397006 WDR62O43379 1518 aa16.23■□□□□ 0.19
PRKAA1-203ENST00000397006 CCDC88BA6NC98 1476 aa16.19■□□□□ 0.18
PRKAA1-203ENST00000397006 PRDM2Q13029 1718 aa16.15■□□□□ 0.18
PRKAA1-203ENST00000397006 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
PRKAA1-203ENST00000397006 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
PRKAA1-203ENST00000397006 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
PRKAA1-203ENST00000397006 TOPBP1Q92547 1522 aa15.97■□□□□ 0.15
PRKAA1-203ENST00000397006 SUPT5HO00267 1087 aaKnown RBP15.96■□□□□ 0.15
PRKAA1-203ENST00000397006 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.14
PRKAA1-203ENST00000397006 OSCARQ8IYS5 282 aa15.93■□□□□ 0.14
PRKAA1-203ENST00000397006 ZNF608Q9ULD9 1512 aaPredicted RBP15.82■□□□□ 0.12
PRKAA1-203ENST00000397006 POLA1P09884 1462 aaPredicted RBP15.8■□□□□ 0.12
PRKAA1-203ENST00000397006 SOGA1O94964 1423 aa15.8■□□□□ 0.12
PRKAA1-203ENST00000397006 EIF4G3O43432 1585 aaKnown RBP15.79■□□□□ 0.12
PRKAA1-203ENST00000397006 WDR97A6NE52 1622 aa15.76■□□□□ 0.11
PRKAA1-203ENST00000397006 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
PRKAA1-203ENST00000397006 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.11
PRKAA1-203ENST00000397006 FGD5Q6ZNL6 1462 aa15.74■□□□□ 0.11
PRKAA1-203ENST00000397006 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
PRKAA1-203ENST00000397006 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
PRKAA1-203ENST00000397006 FBLN2P98095 1184 aa15.71■□□□□ 0.11
PRKAA1-203ENST00000397006 CUX1P39880 1505 aa15.71■□□□□ 0.11
PRKAA1-203ENST00000397006 TDRD9Q8NDG6 1382 aaKnown RBP15.69■□□□□ 0.1
PRKAA1-203ENST00000397006 CHMP7Q8WUX9 453 aaPredicted RBP15.65■□□□□ 0.1
PRKAA1-203ENST00000397006 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
PRKAA1-203ENST00000397006 MAGI1Q96QZ7 1491 aaPredicted RBP15.64■□□□□ 0.09
PRKAA1-203ENST00000397006 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
PRKAA1-203ENST00000397006 SNAPC4Q5SXM2 1469 aa15.61■□□□□ 0.09
PRKAA1-203ENST00000397006 CHD1O14646 1710 aa15.61■□□□□ 0.09
PRKAA1-203ENST00000397006 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
PRKAA1-203ENST00000397006 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
PRKAA1-203ENST00000397006 RIMBP3CA6NJZ7 1639 aa15.57■□□□□ 0.08
PRKAA1-203ENST00000397006 RIMBP3BA6NNM3 1639 aa15.57■□□□□ 0.08
PRKAA1-203ENST00000397006 RIMBP3Q9UFD9 1639 aa15.57■□□□□ 0.08
PRKAA1-203ENST00000397006 SYNJ2O15056 1496 aa15.57■□□□□ 0.08
PRKAA1-203ENST00000397006 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
PRKAA1-203ENST00000397006 TOP2BQ02880 1626 aa15.57■□□□□ 0.08
PRKAA1-203ENST00000397006 ARHGEF11O15085 1522 aa15.56■□□□□ 0.08
PRKAA1-203ENST00000397006 BIVM-ERCC5R4GMW8 1640 aa15.55■□□□□ 0.08
PRKAA1-203ENST00000397006 PBRM1Q86U86 1689 aa15.53■□□□□ 0.08
PRKAA1-203ENST00000397006 ABCA5Q8WWZ7 1642 aa15.51■□□□□ 0.07
PRKAA1-203ENST00000397006 CYB5RLQ6IPT4 315 aa15.48■□□□□ 0.07
PRKAA1-203ENST00000397006 CLASP1Q7Z460 1538 aa15.45■□□□□ 0.06
PRKAA1-203ENST00000397006 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
PRKAA1-203ENST00000397006 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
PRKAA1-203ENST00000397006 GRIN2AQ12879 1464 aa15.41■□□□□ 0.06
PRKAA1-203ENST00000397006 ADAMTS12P58397 1594 aa15.4■□□□□ 0.06
PRKAA1-203ENST00000397006 ARAP1Q96P48 1450 aa15.4■□□□□ 0.06
PRKAA1-203ENST00000397006 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
PRKAA1-203ENST00000397006 NUP160Q12769 1436 aa15.34■□□□□ 0.05
PRKAA1-203ENST00000397006 TRHP20396 242 aaPredicted RBP15.32■□□□□ 0.04
PRKAA1-203ENST00000397006 FOXD1Q16676 465 aa15.32■□□□□ 0.04
PRKAA1-203ENST00000397006 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms