RNA–Protein interactions for RNA: ENST00000396851.3

MSRB1P1-201, Transcript of methionine sulfoxide reductase B1 pseudogene 1, humanhuman

BASIC

Gene MSRB1P1, Length 354 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1P1-201ENST00000396851 NISCHQ9Y2I1 1504 aa19.43■□□□□ 0.7
MSRB1P1-201ENST00000396851 ABCC9O60706 1549 aa17.5■□□□□ 0.39
MSRB1P1-201ENST00000396851 CCDC180Q9P1Z9 1646 aa17.43■□□□□ 0.38
MSRB1P1-201ENST00000396851 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
MSRB1P1-201ENST00000396851 DCAF8L2P0C7V8 631 aa16.63■□□□□ 0.25
MSRB1P1-201ENST00000396851 NACADO15069 1562 aa16.5■□□□□ 0.23
MSRB1P1-201ENST00000396851 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
MSRB1P1-201ENST00000396851 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
MSRB1P1-201ENST00000396851 UNC13AQ9UPW8 1703 aa16.26■□□□□ 0.19
MSRB1P1-201ENST00000396851 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
MSRB1P1-201ENST00000396851 BICRAQ9NZM4 1560 aa16.08■□□□□ 0.16
MSRB1P1-201ENST00000396851 ZCCHC6Q5VYS8 1495 aaKnown RBP16.07■□□□□ 0.16
MSRB1P1-201ENST00000396851 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
MSRB1P1-201ENST00000396851 SCRIBQ14160 1630 aa15.94■□□□□ 0.14
MSRB1P1-201ENST00000396851 SHROOM4Q9ULL8 1493 aa15.85■□□□□ 0.13
MSRB1P1-201ENST00000396851 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
MSRB1P1-201ENST00000396851 CECR2Q9BXF3 1484 aa15.75■□□□□ 0.11
MSRB1P1-201ENST00000396851 EIF4G1Q04637 1599 aaKnown RBP15.73■□□□□ 0.11
MSRB1P1-201ENST00000396851 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
MSRB1P1-201ENST00000396851 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
MSRB1P1-201ENST00000396851 SMARCA4P51532 1647 aa15.17■□□□□ 0.02
MSRB1P1-201ENST00000396851 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
MSRB1P1-201ENST00000396851 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
MSRB1P1-201ENST00000396851 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
MSRB1P1-201ENST00000396851 HMGXB3Q12766 1538 aa15.08■□□□□ 0.01
MSRB1P1-201ENST00000396851 DNAJC5Q9H3Z4 198 aa15.07■□□□□ 0
MSRB1P1-201ENST00000396851 BAZ1BQ9UIG0 1483 aaKnown RBP15.07■□□□□ 0
MSRB1P1-201ENST00000396851 CUX2O14529 1486 aa15.04■□□□□ -0
MSRB1P1-201ENST00000396851 NESP48681 1621 aa15.01□□□□□ -0.01
MSRB1P1-201ENST00000396851 MROH2BQ7Z745 1585 aa14.98□□□□□ -0.01
MSRB1P1-201ENST00000396851 PEG3Q9GZU2 1588 aa14.96□□□□□ -0.01
MSRB1P1-201ENST00000396851 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
MSRB1P1-201ENST00000396851 PDS5BQ9NTI5 1447 aa14.84□□□□□ -0.03
MSRB1P1-201ENST00000396851 WIZO95785 1651 aa14.84□□□□□ -0.03
MSRB1P1-201ENST00000396851 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
MSRB1P1-201ENST00000396851 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
MSRB1P1-201ENST00000396851 CADPSQ9ULU8 1353 aa14.79□□□□□ -0.04
MSRB1P1-201ENST00000396851 MRC2Q9UBG0 1479 aa14.69□□□□□ -0.06
MSRB1P1-201ENST00000396851 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
MSRB1P1-201ENST00000396851 CEP164Q9UPV0 1460 aa14.64□□□□□ -0.07
MSRB1P1-201ENST00000396851 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
MSRB1P1-201ENST00000396851 WDR62O43379 1518 aa14.61□□□□□ -0.07
MSRB1P1-201ENST00000396851 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
MSRB1P1-201ENST00000396851 CFTRP13569 1480 aa14.58□□□□□ -0.08
MSRB1P1-201ENST00000396851 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
MSRB1P1-201ENST00000396851 PRDM2Q13029 1718 aa14.48□□□□□ -0.09
MSRB1P1-201ENST00000396851 CCDC88BA6NC98 1476 aa14.48□□□□□ -0.09
MSRB1P1-201ENST00000396851 URB2Q14146 1524 aaKnown RBP14.47□□□□□ -0.09
MSRB1P1-201ENST00000396851 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
MSRB1P1-201ENST00000396851 IFT140Q96RY7 1462 aa14.34□□□□□ -0.11
MSRB1P1-201ENST00000396851 TOPBP1Q92547 1522 aa14.33□□□□□ -0.12
MSRB1P1-201ENST00000396851 ABCC8Q09428 1581 aa14.33□□□□□ -0.12
MSRB1P1-201ENST00000396851 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
MSRB1P1-201ENST00000396851 DNMBPQ6XZF7 1577 aa14.28□□□□□ -0.12
MSRB1P1-201ENST00000396851 FBLN2P98095 1184 aa14.24□□□□□ -0.13
MSRB1P1-201ENST00000396851 EIF4G3O43432 1585 aaKnown RBP14.23□□□□□ -0.13
MSRB1P1-201ENST00000396851 AQRO60306 1485 aaKnown RBP eCLIP14.21□□□□□ -0.13
MSRB1P1-201ENST00000396851 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
MSRB1P1-201ENST00000396851 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
MSRB1P1-201ENST00000396851 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
MSRB1P1-201ENST00000396851 SUPT5HO00267 1087 aaKnown RBP14.18□□□□□ -0.14
MSRB1P1-201ENST00000396851 TARBP1Q13395 1621 aaKnown RBP14.18□□□□□ -0.14
MSRB1P1-201ENST00000396851 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
MSRB1P1-201ENST00000396851 SOGA1O94964 1423 aa14.17□□□□□ -0.14
MSRB1P1-201ENST00000396851 CHD1O14646 1710 aa14.16□□□□□ -0.14
MSRB1P1-201ENST00000396851 RAD54L2Q9Y4B4 1467 aa14.16□□□□□ -0.14
MSRB1P1-201ENST00000396851 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
MSRB1P1-201ENST00000396851 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
MSRB1P1-201ENST00000396851 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
MSRB1P1-201ENST00000396851 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
MSRB1P1-201ENST00000396851 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
MSRB1P1-201ENST00000396851 CUX1P39880 1505 aa14.07□□□□□ -0.16
MSRB1P1-201ENST00000396851 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
MSRB1P1-201ENST00000396851 WDR97A6NE52 1622 aa14.04□□□□□ -0.16
MSRB1P1-201ENST00000396851 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
MSRB1P1-201ENST00000396851 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
MSRB1P1-201ENST00000396851 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
MSRB1P1-201ENST00000396851 SYNJ1O43426 1573 aa13.99□□□□□ -0.17
MSRB1P1-201ENST00000396851 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
MSRB1P1-201ENST00000396851 PBRM1Q86U86 1689 aa13.98□□□□□ -0.17
MSRB1P1-201ENST00000396851 ARAP1Q96P48 1450 aa13.97□□□□□ -0.17
MSRB1P1-201ENST00000396851 SYNJ2O15056 1496 aa13.96□□□□□ -0.17
MSRB1P1-201ENST00000396851 CLASP1Q7Z460 1538 aa13.93□□□□□ -0.18
MSRB1P1-201ENST00000396851 ABCA10Q8WWZ4 1543 aa13.92□□□□□ -0.18
MSRB1P1-201ENST00000396851 WRNQ14191 1432 aaPredicted RBP eCLIP13.91□□□□□ -0.18
MSRB1P1-201ENST00000396851 ABCA5Q8WWZ7 1642 aa13.89□□□□□ -0.19
MSRB1P1-201ENST00000396851 TOP2BQ02880 1626 aa13.86□□□□□ -0.19
MSRB1P1-201ENST00000396851 BIVM-ERCC5R4GMW8 1640 aa13.85□□□□□ -0.19
MSRB1P1-201ENST00000396851 GRIN2AQ12879 1464 aa13.82□□□□□ -0.2
MSRB1P1-201ENST00000396851 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
MSRB1P1-201ENST00000396851 FHAD1B1AJZ9 1412 aa13.79□□□□□ -0.2
MSRB1P1-201ENST00000396851 CEP170Q5SW79 1584 aa13.76□□□□□ -0.21
MSRB1P1-201ENST00000396851 ERICH3Q5RHP9 1530 aa13.75□□□□□ -0.21
MSRB1P1-201ENST00000396851 ERCC6L2Q5T890 1561 aa13.74□□□□□ -0.21
MSRB1P1-201ENST00000396851 NUP160Q12769 1436 aa13.73□□□□□ -0.21
MSRB1P1-201ENST00000396851 JPH4Q96JJ6 628 aa13.7□□□□□ -0.22
MSRB1P1-201ENST00000396851 PRG4Q92954 1404 aaPredicted RBP13.68□□□□□ -0.22
MSRB1P1-201ENST00000396851 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
MSRB1P1-201ENST00000396851 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
MSRB1P1-201ENST00000396851 AEBP2Q6ZN18 517 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms