RNA–Protein interactions for RNA: ENST00000395988.1

MYOCD-202, Transcript of myocardin, humanhuman

TSL 2

Gene MYOCD, Length 2,344 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYOCD-202ENST00000395988 NISCHQ9Y2I1 1504 aa19.37■□□□□ 0.69
MYOCD-202ENST00000395988 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
MYOCD-202ENST00000395988 ABCC9O60706 1549 aa16.89■□□□□ 0.29
MYOCD-202ENST00000395988 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.2
MYOCD-202ENST00000395988 NACADO15069 1562 aa16.24■□□□□ 0.19
MYOCD-202ENST00000395988 ZCCHC6Q5VYS8 1495 aaKnown RBP16.15■□□□□ 0.18
MYOCD-202ENST00000395988 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.17
MYOCD-202ENST00000395988 DCAF8L2P0C7V8 631 aa16.1■□□□□ 0.17
MYOCD-202ENST00000395988 DCAF1Q9Y4B6 1507 aa16.05■□□□□ 0.16
MYOCD-202ENST00000395988 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
MYOCD-202ENST00000395988 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
MYOCD-202ENST00000395988 SCRIBQ14160 1630 aa15.75■□□□□ 0.11
MYOCD-202ENST00000395988 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
MYOCD-202ENST00000395988 SHROOM4Q9ULL8 1493 aa15.63■□□□□ 0.09
MYOCD-202ENST00000395988 DNAJC5BQ9UF47 199 aa15.48■□□□□ 0.07
MYOCD-202ENST00000395988 EIF4G1Q04637 1599 aaKnown RBP15.37■□□□□ 0.05
MYOCD-202ENST00000395988 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
MYOCD-202ENST00000395988 CECR2Q9BXF3 1484 aa15.18■□□□□ 0.02
MYOCD-202ENST00000395988 SMARCA4P51532 1647 aa15.08■□□□□ 0
MYOCD-202ENST00000395988 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
MYOCD-202ENST00000395988 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
MYOCD-202ENST00000395988 ATAD2BQ9ULI0 1458 aa14.96□□□□□ -0.02
MYOCD-202ENST00000395988 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
MYOCD-202ENST00000395988 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
MYOCD-202ENST00000395988 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
MYOCD-202ENST00000395988 MROH2BQ7Z745 1585 aa14.92□□□□□ -0.02
MYOCD-202ENST00000395988 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
MYOCD-202ENST00000395988 WIZO95785 1651 aa14.79□□□□□ -0.04
MYOCD-202ENST00000395988 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
MYOCD-202ENST00000395988 TOP2AP11388 1531 aaKnown RBP14.63□□□□□ -0.07
MYOCD-202ENST00000395988 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
MYOCD-202ENST00000395988 NESP48681 1621 aa14.6□□□□□ -0.07
MYOCD-202ENST00000395988 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
MYOCD-202ENST00000395988 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.09
MYOCD-202ENST00000395988 CADPSQ9ULU8 1353 aa14.49□□□□□ -0.09
MYOCD-202ENST00000395988 PDS5BQ9NTI5 1447 aa14.46□□□□□ -0.09
MYOCD-202ENST00000395988 THOC2Q8NI27 1593 aaKnown RBP14.46□□□□□ -0.09
MYOCD-202ENST00000395988 PRDM2Q13029 1718 aa14.45□□□□□ -0.1
MYOCD-202ENST00000395988 CUX2O14529 1486 aa14.45□□□□□ -0.1
MYOCD-202ENST00000395988 CFTRP13569 1480 aa14.42□□□□□ -0.1
MYOCD-202ENST00000395988 CCDC88BA6NC98 1476 aa14.42□□□□□ -0.1
MYOCD-202ENST00000395988 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
MYOCD-202ENST00000395988 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
MYOCD-202ENST00000395988 MRC2Q9UBG0 1479 aa14.33□□□□□ -0.11
MYOCD-202ENST00000395988 WDR62O43379 1518 aa14.32□□□□□ -0.12
MYOCD-202ENST00000395988 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
MYOCD-202ENST00000395988 URB2Q14146 1524 aaKnown RBP14.22□□□□□ -0.13
MYOCD-202ENST00000395988 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
MYOCD-202ENST00000395988 TOPBP1Q92547 1522 aa14.13□□□□□ -0.15
MYOCD-202ENST00000395988 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
MYOCD-202ENST00000395988 IFT140Q96RY7 1462 aa14.04□□□□□ -0.16
MYOCD-202ENST00000395988 CUX1P39880 1505 aa14.01□□□□□ -0.17
MYOCD-202ENST00000395988 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
MYOCD-202ENST00000395988 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
MYOCD-202ENST00000395988 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
MYOCD-202ENST00000395988 EIF4G3O43432 1585 aaKnown RBP13.98□□□□□ -0.17
MYOCD-202ENST00000395988 ZNF608Q9ULD9 1512 aaPredicted RBP13.97□□□□□ -0.17
MYOCD-202ENST00000395988 FGD5Q6ZNL6 1462 aa13.96□□□□□ -0.17
MYOCD-202ENST00000395988 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
MYOCD-202ENST00000395988 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
MYOCD-202ENST00000395988 RAD54L2Q9Y4B4 1467 aa13.92□□□□□ -0.18
MYOCD-202ENST00000395988 SOGA1O94964 1423 aa13.91□□□□□ -0.18
MYOCD-202ENST00000395988 TOP2BQ02880 1626 aa13.9□□□□□ -0.18
MYOCD-202ENST00000395988 SYNJ1O43426 1573 aa13.89□□□□□ -0.19
MYOCD-202ENST00000395988 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
MYOCD-202ENST00000395988 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.19
MYOCD-202ENST00000395988 CHD1O14646 1710 aa13.84□□□□□ -0.19
MYOCD-202ENST00000395988 PBRM1Q86U86 1689 aa13.84□□□□□ -0.19
MYOCD-202ENST00000395988 ABCA10Q8WWZ4 1543 aa13.83□□□□□ -0.2
MYOCD-202ENST00000395988 ABCA5Q8WWZ7 1642 aa13.82□□□□□ -0.2
MYOCD-202ENST00000395988 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
MYOCD-202ENST00000395988 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
MYOCD-202ENST00000395988 GAPVD1Q14C86 1478 aa13.78□□□□□ -0.2
MYOCD-202ENST00000395988 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.2
MYOCD-202ENST00000395988 MAGI1Q96QZ7 1491 aaPredicted RBP13.77□□□□□ -0.2
MYOCD-202ENST00000395988 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
MYOCD-202ENST00000395988 SYNJ2O15056 1496 aa13.7□□□□□ -0.22
MYOCD-202ENST00000395988 ADAMTS12P58397 1594 aa13.69□□□□□ -0.22
MYOCD-202ENST00000395988 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
MYOCD-202ENST00000395988 FBLN2P98095 1184 aa13.68□□□□□ -0.22
MYOCD-202ENST00000395988 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.22
MYOCD-202ENST00000395988 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.22
MYOCD-202ENST00000395988 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.22
MYOCD-202ENST00000395988 CHMP7Q8WUX9 453 aaPredicted RBP13.64□□□□□ -0.23
MYOCD-202ENST00000395988 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
MYOCD-202ENST00000395988 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
MYOCD-202ENST00000395988 GRIN2AQ12879 1464 aa13.61□□□□□ -0.23
MYOCD-202ENST00000395988 FHAD1B1AJZ9 1412 aa13.61□□□□□ -0.23
MYOCD-202ENST00000395988 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
MYOCD-202ENST00000395988 KIF27Q86VH2 1401 aa13.6□□□□□ -0.23
MYOCD-202ENST00000395988 CUL7Q14999 1698 aa13.59□□□□□ -0.23
MYOCD-202ENST00000395988 CEP170Q5SW79 1584 aa13.57□□□□□ -0.24
MYOCD-202ENST00000395988 NUP160Q12769 1436 aa13.55□□□□□ -0.24
MYOCD-202ENST00000395988 IGF1RP08069 1367 aa13.51□□□□□ -0.25
MYOCD-202ENST00000395988 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
MYOCD-202ENST00000395988 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
MYOCD-202ENST00000395988 ARAP1Q96P48 1450 aa13.5□□□□□ -0.25
MYOCD-202ENST00000395988 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
MYOCD-202ENST00000395988 CARMIL1Q5VZK9 1371 aa13.44□□□□□ -0.26
MYOCD-202ENST00000395988 AEBP2Q6ZN18 517 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms