RNA–Protein interactions for RNA: ENST00000394505.6

KRIT1-203, Transcript of KRIT1, ankyrin repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRIT1, Length 3,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-203ENST00000394505 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
KRIT1-203ENST00000394505 CCDC180Q9P1Z9 1646 aa17.6■□□□□ 0.41
KRIT1-203ENST00000394505 MYO15BQ96JP2 1530 aa16.62■□□□□ 0.25
KRIT1-203ENST00000394505 DCAF1Q9Y4B6 1507 aa16.62■□□□□ 0.25
KRIT1-203ENST00000394505 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
KRIT1-203ENST00000394505 NACADO15069 1562 aa16.07■□□□□ 0.16
KRIT1-203ENST00000394505 SHROOM4Q9ULL8 1493 aa15.83■□□□□ 0.12
KRIT1-203ENST00000394505 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
KRIT1-203ENST00000394505 RB1CC1Q8TDY2 1594 aa15.78■□□□□ 0.12
KRIT1-203ENST00000394505 BICRAQ9NZM4 1560 aa15.43■□□□□ 0.06
KRIT1-203ENST00000394505 ABCC9O60706 1549 aa15.34■□□□□ 0.05
KRIT1-203ENST00000394505 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
KRIT1-203ENST00000394505 SCRIBQ14160 1630 aa15.12■□□□□ 0.01
KRIT1-203ENST00000394505 SMARCA4P51532 1647 aa14.98□□□□□ -0.01
KRIT1-203ENST00000394505 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
KRIT1-203ENST00000394505 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
KRIT1-203ENST00000394505 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
KRIT1-203ENST00000394505 PRDM2Q13029 1718 aa14.85□□□□□ -0.03
KRIT1-203ENST00000394505 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
KRIT1-203ENST00000394505 TOP2AP11388 1531 aaKnown RBP14.72□□□□□ -0.05
KRIT1-203ENST00000394505 MROH2BQ7Z745 1585 aa14.66□□□□□ -0.06
KRIT1-203ENST00000394505 NCAPD3P42695 1498 aa14.65□□□□□ -0.06
KRIT1-203ENST00000394505 RSF1Q96T23 1441 aaPredicted RBP14.64□□□□□ -0.07
KRIT1-203ENST00000394505 WIZO95785 1651 aa14.58□□□□□ -0.07
KRIT1-203ENST00000394505 CECR2Q9BXF3 1484 aa14.56□□□□□ -0.08
KRIT1-203ENST00000394505 ATAD2BQ9ULI0 1458 aa14.54□□□□□ -0.08
KRIT1-203ENST00000394505 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
KRIT1-203ENST00000394505 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
KRIT1-203ENST00000394505 BIVM-ERCC5R4GMW8 1640 aa14.29□□□□□ -0.12
KRIT1-203ENST00000394505 BAZ1BQ9UIG0 1483 aaKnown RBP14.26□□□□□ -0.13
KRIT1-203ENST00000394505 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
KRIT1-203ENST00000394505 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.14
KRIT1-203ENST00000394505 CFTRP13569 1480 aa14.2□□□□□ -0.14
KRIT1-203ENST00000394505 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
KRIT1-203ENST00000394505 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
KRIT1-203ENST00000394505 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
KRIT1-203ENST00000394505 THOC2Q8NI27 1593 aaKnown RBP14.01□□□□□ -0.17
KRIT1-203ENST00000394505 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
KRIT1-203ENST00000394505 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
KRIT1-203ENST00000394505 WDR62O43379 1518 aa13.97□□□□□ -0.17
KRIT1-203ENST00000394505 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
KRIT1-203ENST00000394505 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
KRIT1-203ENST00000394505 PRKCSHP14314 528 aaPredicted RBP13.95□□□□□ -0.18
KRIT1-203ENST00000394505 CADPSQ9ULU8 1353 aa13.9□□□□□ -0.18
KRIT1-203ENST00000394505 MYT1Q01538 1121 aa13.86□□□□□ -0.19
KRIT1-203ENST00000394505 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
KRIT1-203ENST00000394505 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
KRIT1-203ENST00000394505 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
KRIT1-203ENST00000394505 CUX1P39880 1505 aa13.82□□□□□ -0.2
KRIT1-203ENST00000394505 KIF21BO75037 1637 aa13.77□□□□□ -0.2
KRIT1-203ENST00000394505 CUL7Q14999 1698 aa13.75□□□□□ -0.21
KRIT1-203ENST00000394505 EEA1Q15075 1411 aa13.74□□□□□ -0.21
KRIT1-203ENST00000394505 ABCA10Q8WWZ4 1543 aa13.73□□□□□ -0.21
KRIT1-203ENST00000394505 PBRM1Q86U86 1689 aa13.72□□□□□ -0.21
KRIT1-203ENST00000394505 FANCD2Q9BXW9 1451 aa13.72□□□□□ -0.21
KRIT1-203ENST00000394505 PDS5BQ9NTI5 1447 aa13.72□□□□□ -0.21
KRIT1-203ENST00000394505 MRC2Q9UBG0 1479 aa13.71□□□□□ -0.21
KRIT1-203ENST00000394505 ERICH3Q5RHP9 1530 aa13.7□□□□□ -0.22
KRIT1-203ENST00000394505 TOPBP1Q92547 1522 aa13.7□□□□□ -0.22
KRIT1-203ENST00000394505 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
KRIT1-203ENST00000394505 CEP164Q9UPV0 1460 aa13.69□□□□□ -0.22
KRIT1-203ENST00000394505 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
KRIT1-203ENST00000394505 CUX2O14529 1486 aa13.62□□□□□ -0.23
KRIT1-203ENST00000394505 CTTNBP2Q8WZ74 1663 aa13.57□□□□□ -0.24
KRIT1-203ENST00000394505 NESP48681 1621 aa13.57□□□□□ -0.24
KRIT1-203ENST00000394505 IFT140Q96RY7 1462 aa13.56□□□□□ -0.24
KRIT1-203ENST00000394505 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
KRIT1-203ENST00000394505 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
KRIT1-203ENST00000394505 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
KRIT1-203ENST00000394505 FGD5Q6ZNL6 1462 aa13.51□□□□□ -0.25
KRIT1-203ENST00000394505 DNAJC5BQ9UF47 199 aa13.5□□□□□ -0.25
KRIT1-203ENST00000394505 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
KRIT1-203ENST00000394505 SHROOM2Q13796 1616 aa13.49□□□□□ -0.25
KRIT1-203ENST00000394505 SAMD9Q5K651 1589 aa13.43□□□□□ -0.26
KRIT1-203ENST00000394505 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
KRIT1-203ENST00000394505 MAGI1Q96QZ7 1491 aaPredicted RBP13.41□□□□□ -0.26
KRIT1-203ENST00000394505 CHIC1Q5VXU3 224 aa13.39□□□□□ -0.27
KRIT1-203ENST00000394505 FAM9AQ8IZU1 332 aaPredicted RBP13.36□□□□□ -0.27
KRIT1-203ENST00000394505 SCAF1Q9H7N4 1312 aaKnown RBP13.36□□□□□ -0.27
KRIT1-203ENST00000394505 RUSC2Q8N2Y8 1516 aa13.35□□□□□ -0.27
KRIT1-203ENST00000394505 SUPT5HO00267 1087 aaKnown RBP13.35□□□□□ -0.27
KRIT1-203ENST00000394505 EFCAB5A4FU69 1503 aa13.33□□□□□ -0.28
KRIT1-203ENST00000394505 SLC24A1O60721 1099 aa13.33□□□□□ -0.28
KRIT1-203ENST00000394505 PPARGC1BQ86YN6 1023 aaKnown RBP13.32□□□□□ -0.28
KRIT1-203ENST00000394505 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
KRIT1-203ENST00000394505 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
KRIT1-203ENST00000394505 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
KRIT1-203ENST00000394505 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
KRIT1-203ENST00000394505 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
KRIT1-203ENST00000394505 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
KRIT1-203ENST00000394505 CHD1O14646 1710 aa13.27□□□□□ -0.28
KRIT1-203ENST00000394505 NUP160Q12769 1436 aa13.26□□□□□ -0.29
KRIT1-203ENST00000394505 GAPVD1Q14C86 1478 aa13.25□□□□□ -0.29
KRIT1-203ENST00000394505 GOLGA3Q08378 1498 aa13.25□□□□□ -0.29
KRIT1-203ENST00000394505 SOGA1O94964 1423 aa13.24□□□□□ -0.29
KRIT1-203ENST00000394505 FHAD1B1AJZ9 1412 aa13.24□□□□□ -0.29
KRIT1-203ENST00000394505 CFAP43Q8NDM7 1665 aa13.23□□□□□ -0.29
KRIT1-203ENST00000394505 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.292e-6■□□□□ 8.5
KRIT1-203ENST00000394505 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
KRIT1-203ENST00000394505 IGF1RP08069 1367 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms