RNA–Protein interactions for RNA: ENST00000393473.6

LIPT1-202, Transcript of lipoyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPT1, Length 1,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPT1-202ENST00000393473 NISCHQ9Y2I1 1504 aa25.11■■□□□ 1.61
LIPT1-202ENST00000393473 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
LIPT1-202ENST00000393473 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
LIPT1-202ENST00000393473 ABCC9O60706 1549 aa22.45■■□□□ 1.18
LIPT1-202ENST00000393473 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
LIPT1-202ENST00000393473 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
LIPT1-202ENST00000393473 DCAF8L2P0C7V8 631 aa21.26■□□□□ 0.99
LIPT1-202ENST00000393473 NACADO15069 1562 aa21.24■□□□□ 0.99
LIPT1-202ENST00000393473 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.95
LIPT1-202ENST00000393473 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
LIPT1-202ENST00000393473 UNC13AQ9UPW8 1703 aa20.93■□□□□ 0.94
LIPT1-202ENST00000393473 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
LIPT1-202ENST00000393473 ZCCHC6Q5VYS8 1495 aaKnown RBP20.82■□□□□ 0.92
LIPT1-202ENST00000393473 BICRAQ9NZM4 1560 aa20.74■□□□□ 0.91
LIPT1-202ENST00000393473 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
LIPT1-202ENST00000393473 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
LIPT1-202ENST00000393473 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
LIPT1-202ENST00000393473 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
LIPT1-202ENST00000393473 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
LIPT1-202ENST00000393473 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
LIPT1-202ENST00000393473 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
LIPT1-202ENST00000393473 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
LIPT1-202ENST00000393473 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
LIPT1-202ENST00000393473 SMARCA4P51532 1647 aa19.59■□□□□ 0.73
LIPT1-202ENST00000393473 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
LIPT1-202ENST00000393473 SMARCA2P51531 1590 aa19.52■□□□□ 0.72
LIPT1-202ENST00000393473 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
LIPT1-202ENST00000393473 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
LIPT1-202ENST00000393473 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
LIPT1-202ENST00000393473 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
LIPT1-202ENST00000393473 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
LIPT1-202ENST00000393473 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
LIPT1-202ENST00000393473 NESP48681 1621 aa19.31■□□□□ 0.68
LIPT1-202ENST00000393473 CUX2O14529 1486 aa19.27■□□□□ 0.67
LIPT1-202ENST00000393473 WIZO95785 1651 aa19.17■□□□□ 0.66
LIPT1-202ENST00000393473 DNAJC5Q9H3Z4 198 aa19.17■□□□□ 0.66
LIPT1-202ENST00000393473 LAMC3Q9Y6N6 1575 aa19.17■□□□□ 0.66
LIPT1-202ENST00000393473 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.64
LIPT1-202ENST00000393473 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
LIPT1-202ENST00000393473 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
LIPT1-202ENST00000393473 CADPSQ9ULU8 1353 aa19.02■□□□□ 0.64
LIPT1-202ENST00000393473 RSF1Q96T23 1441 aaPredicted RBP18.99■□□□□ 0.63
LIPT1-202ENST00000393473 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
LIPT1-202ENST00000393473 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
LIPT1-202ENST00000393473 CEP164Q9UPV0 1460 aa18.83■□□□□ 0.61
LIPT1-202ENST00000393473 FANCD2Q9BXW9 1451 aa18.83■□□□□ 0.6
LIPT1-202ENST00000393473 WDR62O43379 1518 aa18.82■□□□□ 0.6
LIPT1-202ENST00000393473 CFTRP13569 1480 aa18.82■□□□□ 0.6
LIPT1-202ENST00000393473 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
LIPT1-202ENST00000393473 PRDM2Q13029 1718 aa18.68■□□□□ 0.58
LIPT1-202ENST00000393473 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
LIPT1-202ENST00000393473 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
LIPT1-202ENST00000393473 FOXD1Q16676 465 aa18.45■□□□□ 0.54
LIPT1-202ENST00000393473 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
LIPT1-202ENST00000393473 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
LIPT1-202ENST00000393473 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
LIPT1-202ENST00000393473 ABCC8Q09428 1581 aa18.43■□□□□ 0.54
LIPT1-202ENST00000393473 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
LIPT1-202ENST00000393473 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
LIPT1-202ENST00000393473 EIF4G3O43432 1585 aaKnown RBP18.33■□□□□ 0.52
LIPT1-202ENST00000393473 TARBP1Q13395 1621 aaKnown RBP18.3■□□□□ 0.52
LIPT1-202ENST00000393473 SUPT5HO00267 1087 aaKnown RBP18.3■□□□□ 0.52
LIPT1-202ENST00000393473 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
LIPT1-202ENST00000393473 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.52
LIPT1-202ENST00000393473 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
LIPT1-202ENST00000393473 SOGA1O94964 1423 aa18.22■□□□□ 0.51
LIPT1-202ENST00000393473 CHD1O14646 1710 aa18.2■□□□□ 0.5
LIPT1-202ENST00000393473 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
LIPT1-202ENST00000393473 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
LIPT1-202ENST00000393473 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
LIPT1-202ENST00000393473 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
LIPT1-202ENST00000393473 CUX1P39880 1505 aa18.19■□□□□ 0.5
LIPT1-202ENST00000393473 FBLN2P98095 1184 aa18.18■□□□□ 0.5
LIPT1-202ENST00000393473 TDRD9Q8NDG6 1382 aaKnown RBP18.18■□□□□ 0.5
LIPT1-202ENST00000393473 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
LIPT1-202ENST00000393473 WDR97A6NE52 1622 aa18.09■□□□□ 0.49
LIPT1-202ENST00000393473 SNAPC4Q5SXM2 1469 aa18.09■□□□□ 0.49
LIPT1-202ENST00000393473 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
LIPT1-202ENST00000393473 CHMP7Q8WUX9 453 aaPredicted RBP18.04■□□□□ 0.48
LIPT1-202ENST00000393473 GRIN2BQ13224 1484 aa18.04■□□□□ 0.48
LIPT1-202ENST00000393473 CYB5RLQ6IPT4 315 aa18.03■□□□□ 0.48
LIPT1-202ENST00000393473 MAGI1Q96QZ7 1491 aaPredicted RBP18.02■□□□□ 0.48
LIPT1-202ENST00000393473 PBRM1Q86U86 1689 aa18.01■□□□□ 0.47
LIPT1-202ENST00000393473 GAPVD1Q14C86 1478 aa18■□□□□ 0.47
LIPT1-202ENST00000393473 ABCA10Q8WWZ4 1543 aa17.98■□□□□ 0.47
LIPT1-202ENST00000393473 SYNJ2O15056 1496 aa17.97■□□□□ 0.47
LIPT1-202ENST00000393473 SYNJ1O43426 1573 aa17.96■□□□□ 0.47
LIPT1-202ENST00000393473 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
LIPT1-202ENST00000393473 CLASP1Q7Z460 1538 aa17.95■□□□□ 0.46
LIPT1-202ENST00000393473 ABCA5Q8WWZ7 1642 aa17.94■□□□□ 0.46
LIPT1-202ENST00000393473 WRNQ14191 1432 aaPredicted RBP eCLIP17.94■□□□□ 0.46
LIPT1-202ENST00000393473 TOP2BQ02880 1626 aa17.92■□□□□ 0.46
LIPT1-202ENST00000393473 BIVM-ERCC5R4GMW8 1640 aa17.92■□□□□ 0.46
LIPT1-202ENST00000393473 TRHP20396 242 aaPredicted RBP17.82■□□□□ 0.44
LIPT1-202ENST00000393473 ADAMTS12P58397 1594 aa17.81■□□□□ 0.44
LIPT1-202ENST00000393473 GRIN2AQ12879 1464 aa17.8■□□□□ 0.44
LIPT1-202ENST00000393473 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
LIPT1-202ENST00000393473 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
LIPT1-202ENST00000393473 CEP170Q5SW79 1584 aa17.75■□□□□ 0.43
LIPT1-202ENST00000393473 NUP160Q12769 1436 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms