RNA–Protein interactions for RNA: ENST00000392873.3

KMT2A-202, Transcript of lysine methyltransferase 2A, humanhuman

TSL 1 (best)

Gene KMT2A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KMT2A-202ENST00000392873 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
KMT2A-202ENST00000392873 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
KMT2A-202ENST00000392873 NISCHQ9Y2I1 1504 aa20.96■□□□□ 0.95
KMT2A-202ENST00000392873 SENP3Q9H4L4 574 aaPredicted RBP19.38■□□□□ 0.69
KMT2A-202ENST00000392873 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
KMT2A-202ENST00000392873 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
KMT2A-202ENST00000392873 ABCC9O60706 1549 aa18.77■□□□□ 0.6
KMT2A-202ENST00000392873 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
KMT2A-202ENST00000392873 FOXD1Q16676 465 aa18.06■□□□□ 0.48
KMT2A-202ENST00000392873 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
KMT2A-202ENST00000392873 NACADO15069 1562 aa17.84■□□□□ 0.45
KMT2A-202ENST00000392873 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
KMT2A-202ENST00000392873 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
KMT2A-202ENST00000392873 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
KMT2A-202ENST00000392873 DCAF8L2P0C7V8 631 aa17.56■□□□□ 0.4
KMT2A-202ENST00000392873 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
KMT2A-202ENST00000392873 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
KMT2A-202ENST00000392873 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
KMT2A-202ENST00000392873 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
KMT2A-202ENST00000392873 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
KMT2A-202ENST00000392873 SHROOM4Q9ULL8 1493 aa17.26■□□□□ 0.35
KMT2A-202ENST00000392873 MSH5O43196 834 aa17.19■□□□□ 0.34
KMT2A-202ENST00000392873 SCRIBQ14160 1630 aa17.13■□□□□ 0.33
KMT2A-202ENST00000392873 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
KMT2A-202ENST00000392873 ADRA2BP18089 450 aa17.06■□□□□ 0.32
KMT2A-202ENST00000392873 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.31
KMT2A-202ENST00000392873 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
KMT2A-202ENST00000392873 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
KMT2A-202ENST00000392873 PIAS4Q8N2W9 510 aaPredicted RBP16.94■□□□□ 0.3
KMT2A-202ENST00000392873 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
KMT2A-202ENST00000392873 SMARCA4P51532 1647 aa16.38■□□□□ 0.21
KMT2A-202ENST00000392873 SMARCA2P51531 1590 aa16.37■□□□□ 0.21
KMT2A-202ENST00000392873 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
KMT2A-202ENST00000392873 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
KMT2A-202ENST00000392873 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
KMT2A-202ENST00000392873 CUX2O14529 1486 aa16.28■□□□□ 0.2
KMT2A-202ENST00000392873 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
KMT2A-202ENST00000392873 ERCC6Q03468 1493 aa16.24■□□□□ 0.19
KMT2A-202ENST00000392873 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
KMT2A-202ENST00000392873 DNAJC5Q9H3Z4 198 aa16.2■□□□□ 0.18
KMT2A-202ENST00000392873 MROH2BQ7Z745 1585 aa16.12■□□□□ 0.17
KMT2A-202ENST00000392873 NESP48681 1621 aa16.12■□□□□ 0.17
KMT2A-202ENST00000392873 LAMC3Q9Y6N6 1575 aa16.11■□□□□ 0.17
KMT2A-202ENST00000392873 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
KMT2A-202ENST00000392873 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
KMT2A-202ENST00000392873 PDS5BQ9NTI5 1447 aa15.97■□□□□ 0.15
KMT2A-202ENST00000392873 WIZO95785 1651 aa15.95■□□□□ 0.14
KMT2A-202ENST00000392873 CADPSQ9ULU8 1353 aa15.9■□□□□ 0.14
KMT2A-202ENST00000392873 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
KMT2A-202ENST00000392873 WDR62O43379 1518 aa15.82■□□□□ 0.12
KMT2A-202ENST00000392873 TOP2AP11388 1531 aaKnown RBP15.77■□□□□ 0.11
KMT2A-202ENST00000392873 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.11
KMT2A-202ENST00000392873 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.11
KMT2A-202ENST00000392873 CFTRP13569 1480 aa15.74■□□□□ 0.11
KMT2A-202ENST00000392873 PRDM2Q13029 1718 aa15.73■□□□□ 0.11
KMT2A-202ENST00000392873 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
KMT2A-202ENST00000392873 MAPK8IP2Q13387 824 aaPredicted RBP15.6■□□□□ 0.09
KMT2A-202ENST00000392873 URB2Q14146 1524 aaKnown RBP15.59■□□□□ 0.09
KMT2A-202ENST00000392873 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.08
KMT2A-202ENST00000392873 CCDC88BA6NC98 1476 aa15.54■□□□□ 0.08
KMT2A-202ENST00000392873 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
KMT2A-202ENST00000392873 ABCC8Q09428 1581 aa15.46■□□□□ 0.07
KMT2A-202ENST00000392873 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
KMT2A-202ENST00000392873 IFT140Q96RY7 1462 aa15.46■□□□□ 0.06
KMT2A-202ENST00000392873 TOPBP1Q92547 1522 aa15.44■□□□□ 0.06
KMT2A-202ENST00000392873 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
KMT2A-202ENST00000392873 DNMBPQ6XZF7 1577 aa15.41■□□□□ 0.06
KMT2A-202ENST00000392873 DMRT2Q9Y5R5 561 aa15.41■□□□□ 0.06
KMT2A-202ENST00000392873 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
KMT2A-202ENST00000392873 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
KMT2A-202ENST00000392873 TARBP1Q13395 1621 aaKnown RBP15.33■□□□□ 0.04
KMT2A-202ENST00000392873 RIMBP3CA6NJZ7 1639 aa15.31■□□□□ 0.04
KMT2A-202ENST00000392873 RIMBP3BA6NNM3 1639 aa15.31■□□□□ 0.04
KMT2A-202ENST00000392873 RIMBP3Q9UFD9 1639 aa15.31■□□□□ 0.04
KMT2A-202ENST00000392873 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
KMT2A-202ENST00000392873 CHD1O14646 1710 aa15.29■□□□□ 0.04
KMT2A-202ENST00000392873 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.04
KMT2A-202ENST00000392873 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
KMT2A-202ENST00000392873 ARHGEF11O15085 1522 aa15.23■□□□□ 0.03
KMT2A-202ENST00000392873 AQRO60306 1485 aaKnown RBP eCLIP15.22■□□□□ 0.033e-13■■■□□ 16.4
KMT2A-202ENST00000392873 SOGA1O94964 1423 aa15.18■□□□□ 0.02
KMT2A-202ENST00000392873 FGD5Q6ZNL6 1462 aa15.17■□□□□ 0.02
KMT2A-202ENST00000392873 RAD54L2Q9Y4B4 1467 aa15.17■□□□□ 0.02
KMT2A-202ENST00000392873 CUX1P39880 1505 aa15.15■□□□□ 0.02
KMT2A-202ENST00000392873 MAGI1Q96QZ7 1491 aaPredicted RBP15.12■□□□□ 0.01
KMT2A-202ENST00000392873 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
KMT2A-202ENST00000392873 SNAPC4Q5SXM2 1469 aa15.1■□□□□ 0.01
KMT2A-202ENST00000392873 FBLN2P98095 1184 aa15.1■□□□□ 0.01
KMT2A-202ENST00000392873 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
KMT2A-202ENST00000392873 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
KMT2A-202ENST00000392873 GRIN2BQ13224 1484 aa15.08■□□□□ 0.01
KMT2A-202ENST00000392873 SYNJ1O43426 1573 aa15.08■□□□□ 0
KMT2A-202ENST00000392873 ARAP1Q96P48 1450 aa15.08■□□□□ 0
KMT2A-202ENST00000392873 CLASP1Q7Z460 1538 aa15.07■□□□□ 0
KMT2A-202ENST00000392873 CYB5RLQ6IPT4 315 aa15.05■□□□□ -0
KMT2A-202ENST00000392873 SYNJ2O15056 1496 aa15.04■□□□□ -0
KMT2A-202ENST00000392873 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
KMT2A-202ENST00000392873 ABCA10Q8WWZ4 1543 aa15.03■□□□□ -0
KMT2A-202ENST00000392873 GAPVD1Q14C86 1478 aa15.02■□□□□ -0
KMT2A-202ENST00000392873 CHMP7Q8WUX9 453 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms