RNA–Protein interactions for RNA: ENST00000391783.6

ZNF28-202, Transcript of zinc finger protein 28, humanhuman

TSL 2

Gene ZNF28, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-202ENST00000391783 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
ZNF28-202ENST00000391783 CCDC180Q9P1Z9 1646 aa19.1■□□□□ 0.65
ZNF28-202ENST00000391783 ABCC9O60706 1549 aa18.96■□□□□ 0.63
ZNF28-202ENST00000391783 RB1CC1Q8TDY2 1594 aa18.13■□□□□ 0.49
ZNF28-202ENST00000391783 NACADO15069 1562 aa18.04■□□□□ 0.48
ZNF28-202ENST00000391783 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
ZNF28-202ENST00000391783 MYO15BQ96JP2 1530 aa17.84■□□□□ 0.45
ZNF28-202ENST00000391783 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
ZNF28-202ENST00000391783 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
ZNF28-202ENST00000391783 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
ZNF28-202ENST00000391783 ZCCHC6Q5VYS8 1495 aaKnown RBP17.66■□□□□ 0.42
ZNF28-202ENST00000391783 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
ZNF28-202ENST00000391783 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
ZNF28-202ENST00000391783 SHROOM4Q9ULL8 1493 aa17.4■□□□□ 0.38
ZNF28-202ENST00000391783 SCRIBQ14160 1630 aa17.34■□□□□ 0.37
ZNF28-202ENST00000391783 CC2D2AQ9P2K1 1620 aa17.15■□□□□ 0.34
ZNF28-202ENST00000391783 EIF4G1Q04637 1599 aaKnown RBP17.14■□□□□ 0.33
ZNF28-202ENST00000391783 CECR2Q9BXF3 1484 aa17.09■□□□□ 0.33
ZNF28-202ENST00000391783 NCAPD3P42695 1498 aa16.66■□□□□ 0.26
ZNF28-202ENST00000391783 AEBP2Q6ZN18 517 aaPredicted RBP16.62■□□□□ 0.25
ZNF28-202ENST00000391783 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
ZNF28-202ENST00000391783 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
ZNF28-202ENST00000391783 SMARCA2P51531 1590 aa16.56■□□□□ 0.24
ZNF28-202ENST00000391783 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
ZNF28-202ENST00000391783 HMGXB3Q12766 1538 aa16.52■□□□□ 0.24
ZNF28-202ENST00000391783 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
ZNF28-202ENST00000391783 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
ZNF28-202ENST00000391783 MROH2BQ7Z745 1585 aa16.4■□□□□ 0.22
ZNF28-202ENST00000391783 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
ZNF28-202ENST00000391783 CUX2O14529 1486 aa16.36■□□□□ 0.21
ZNF28-202ENST00000391783 NESP48681 1621 aa16.31■□□□□ 0.2
ZNF28-202ENST00000391783 DNAJC5Q9H3Z4 198 aa16.26■□□□□ 0.19
ZNF28-202ENST00000391783 LAMC3Q9Y6N6 1575 aa16.25■□□□□ 0.19
ZNF28-202ENST00000391783 WIZO95785 1651 aa16.19■□□□□ 0.18
ZNF28-202ENST00000391783 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
ZNF28-202ENST00000391783 THOC2Q8NI27 1593 aaKnown RBP16.15■□□□□ 0.18
ZNF28-202ENST00000391783 CADPSQ9ULU8 1353 aa16.14■□□□□ 0.17
ZNF28-202ENST00000391783 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
ZNF28-202ENST00000391783 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
ZNF28-202ENST00000391783 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
ZNF28-202ENST00000391783 MRC2Q9UBG0 1479 aa16■□□□□ 0.15
ZNF28-202ENST00000391783 CFTRP13569 1480 aa15.97■□□□□ 0.15
ZNF28-202ENST00000391783 WDR62O43379 1518 aa15.96■□□□□ 0.15
ZNF28-202ENST00000391783 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
ZNF28-202ENST00000391783 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
ZNF28-202ENST00000391783 CCDC88BA6NC98 1476 aa15.83■□□□□ 0.13
ZNF28-202ENST00000391783 PRDM2Q13029 1718 aa15.82■□□□□ 0.12
ZNF28-202ENST00000391783 URB2Q14146 1524 aaKnown RBP15.8■□□□□ 0.12
ZNF28-202ENST00000391783 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
ZNF28-202ENST00000391783 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
ZNF28-202ENST00000391783 TOPBP1Q92547 1522 aa15.65■□□□□ 0.1
ZNF28-202ENST00000391783 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
ZNF28-202ENST00000391783 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
ZNF28-202ENST00000391783 DNMBPQ6XZF7 1577 aa15.6■□□□□ 0.09
ZNF28-202ENST00000391783 ZNF608Q9ULD9 1512 aaPredicted RBP15.57■□□□□ 0.08
ZNF28-202ENST00000391783 TRIM41Q8WV44 630 aa15.52■□□□□ 0.08
ZNF28-202ENST00000391783 TARBP1Q13395 1621 aaKnown RBP15.51■□□□□ 0.07
ZNF28-202ENST00000391783 EIF4G3O43432 1585 aaKnown RBP15.49■□□□□ 0.07
ZNF28-202ENST00000391783 POLA1P09884 1462 aaPredicted RBP15.48■□□□□ 0.07
ZNF28-202ENST00000391783 AQRO60306 1485 aaKnown RBP eCLIP15.45■□□□□ 0.06
ZNF28-202ENST00000391783 SOGA1O94964 1423 aa15.43■□□□□ 0.06
ZNF28-202ENST00000391783 RAD54L2Q9Y4B4 1467 aa15.42■□□□□ 0.06
ZNF28-202ENST00000391783 CUX1P39880 1505 aa15.4■□□□□ 0.06
ZNF28-202ENST00000391783 SUPT5HO00267 1087 aaKnown RBP15.4■□□□□ 0.06
ZNF28-202ENST00000391783 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
ZNF28-202ENST00000391783 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
ZNF28-202ENST00000391783 RIMBP3CA6NJZ7 1639 aa15.38■□□□□ 0.05
ZNF28-202ENST00000391783 RIMBP3BA6NNM3 1639 aa15.38■□□□□ 0.05
ZNF28-202ENST00000391783 RIMBP3Q9UFD9 1639 aa15.38■□□□□ 0.05
ZNF28-202ENST00000391783 CHD1O14646 1710 aa15.37■□□□□ 0.05
ZNF28-202ENST00000391783 TDRD9Q8NDG6 1382 aaKnown RBP15.37■□□□□ 0.05
ZNF28-202ENST00000391783 ARHGEF11O15085 1522 aa15.34■□□□□ 0.05
ZNF28-202ENST00000391783 FBLN2P98095 1184 aa15.31■□□□□ 0.04
ZNF28-202ENST00000391783 GRIN2BQ13224 1484 aa15.29■□□□□ 0.04
ZNF28-202ENST00000391783 SNAPC4Q5SXM2 1469 aa15.29■□□□□ 0.04
ZNF28-202ENST00000391783 MAGI1Q96QZ7 1491 aaPredicted RBP15.28■□□□□ 0.04
ZNF28-202ENST00000391783 ABCA10Q8WWZ4 1543 aa15.25■□□□□ 0.03
ZNF28-202ENST00000391783 CHMP7Q8WUX9 453 aaPredicted RBP15.24■□□□□ 0.03
ZNF28-202ENST00000391783 GAPVD1Q14C86 1478 aa15.24■□□□□ 0.03
ZNF28-202ENST00000391783 SYNJ2O15056 1496 aa15.22■□□□□ 0.03
ZNF28-202ENST00000391783 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
ZNF28-202ENST00000391783 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
ZNF28-202ENST00000391783 PBRM1Q86U86 1689 aa15.21■□□□□ 0.03
ZNF28-202ENST00000391783 SYNJ1O43426 1573 aa15.21■□□□□ 0.03
ZNF28-202ENST00000391783 ABCA5Q8WWZ7 1642 aa15.2■□□□□ 0.02
ZNF28-202ENST00000391783 WRNQ14191 1432 aaPredicted RBP eCLIP15.2■□□□□ 0.02
ZNF28-202ENST00000391783 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
ZNF28-202ENST00000391783 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
ZNF28-202ENST00000391783 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
ZNF28-202ENST00000391783 GRIN2AQ12879 1464 aa15.08■□□□□ 0
ZNF28-202ENST00000391783 ADAMTS12P58397 1594 aa15.08■□□□□ 0
ZNF28-202ENST00000391783 FHAD1B1AJZ9 1412 aa15.06■□□□□ 0
ZNF28-202ENST00000391783 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
ZNF28-202ENST00000391783 NUP160Q12769 1436 aa15.05■□□□□ -0
ZNF28-202ENST00000391783 CEP170Q5SW79 1584 aa15.02□□□□□ -0.01
ZNF28-202ENST00000391783 TRHP20396 242 aaPredicted RBP15.01□□□□□ -0.01
ZNF28-202ENST00000391783 SHROOM2Q13796 1616 aa14.97□□□□□ -0.01
ZNF28-202ENST00000391783 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
ZNF28-202ENST00000391783 KIF27Q86VH2 1401 aa14.9□□□□□ -0.02
ZNF28-202ENST00000391783 JPH4Q96JJ6 628 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms