RNA–Protein interactions for RNA: ENST00000391588.2

KRTAP3-1-201, Transcript of keratin associated protein 3-1, humanhuman

APPRIS P1 BASIC

Gene KRTAP3-1, Length 594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1-201ENST00000391588 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
KRTAP3-1-201ENST00000391588 CHIC1Q5VXU3 224 aa16.42■□□□□ 0.22
KRTAP3-1-201ENST00000391588 NISCHQ9Y2I1 1504 aa16.12■□□□□ 0.17
KRTAP3-1-201ENST00000391588 ABCC9O60706 1549 aa14.89□□□□□ -0.03
KRTAP3-1-201ENST00000391588 CCDC180Q9P1Z9 1646 aa14.6□□□□□ -0.07
KRTAP3-1-201ENST00000391588 PHF23Q9BUL5 403 aaPredicted RBP14.46□□□□□ -0.09
KRTAP3-1-201ENST00000391588 DNAJC5BQ9UF47 199 aa14.2□□□□□ -0.14
KRTAP3-1-201ENST00000391588 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
KRTAP3-1-201ENST00000391588 RB1CC1Q8TDY2 1594 aa14.03□□□□□ -0.16
KRTAP3-1-201ENST00000391588 NACADO15069 1562 aa13.85□□□□□ -0.19
KRTAP3-1-201ENST00000391588 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
KRTAP3-1-201ENST00000391588 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
KRTAP3-1-201ENST00000391588 DCAF8L2P0C7V8 631 aa13.73□□□□□ -0.21
KRTAP3-1-201ENST00000391588 BICRAQ9NZM4 1560 aa13.65□□□□□ -0.22
KRTAP3-1-201ENST00000391588 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
KRTAP3-1-201ENST00000391588 CECR2Q9BXF3 1484 aa13.43□□□□□ -0.26
KRTAP3-1-201ENST00000391588 CC2D2AQ9P2K1 1620 aa13.43□□□□□ -0.26
KRTAP3-1-201ENST00000391588 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
KRTAP3-1-201ENST00000391588 PLPPR3Q6T4P5 718 aa13.38□□□□□ -0.27
KRTAP3-1-201ENST00000391588 EIF4G1Q04637 1599 aaKnown RBP13.33□□□□□ -0.28
KRTAP3-1-201ENST00000391588 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
KRTAP3-1-201ENST00000391588 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
KRTAP3-1-201ENST00000391588 DCAF1Q9Y4B6 1507 aa13.28□□□□□ -0.28
KRTAP3-1-201ENST00000391588 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
KRTAP3-1-201ENST00000391588 FOXD1Q16676 465 aa13.13□□□□□ -0.31
KRTAP3-1-201ENST00000391588 CUX2O14529 1486 aa12.92□□□□□ -0.34
KRTAP3-1-201ENST00000391588 ERCC6Q03468 1493 aa12.87□□□□□ -0.35
KRTAP3-1-201ENST00000391588 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
KRTAP3-1-201ENST00000391588 NESP48681 1621 aa12.72□□□□□ -0.37
KRTAP3-1-201ENST00000391588 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
KRTAP3-1-201ENST00000391588 ADRA2BP18089 450 aa12.71□□□□□ -0.37
KRTAP3-1-201ENST00000391588 PPP6R1Q9UPN7 881 aa12.71□□□□□ -0.37
KRTAP3-1-201ENST00000391588 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
KRTAP3-1-201ENST00000391588 SMARCA2P51531 1590 aa12.67□□□□□ -0.38
KRTAP3-1-201ENST00000391588 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
KRTAP3-1-201ENST00000391588 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
KRTAP3-1-201ENST00000391588 BAZ1BQ9UIG0 1483 aaKnown RBP12.59□□□□□ -0.39
KRTAP3-1-201ENST00000391588 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
KRTAP3-1-201ENST00000391588 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
KRTAP3-1-201ENST00000391588 KIF21AQ7Z4S6 1674 aa12.55□□□□□ -0.4
KRTAP3-1-201ENST00000391588 BAZ1AQ9NRL2 1556 aaPredicted RBP12.53□□□□□ -0.4
KRTAP3-1-201ENST00000391588 PEG3Q9GZU2 1588 aa12.51□□□□□ -0.41
KRTAP3-1-201ENST00000391588 PDS5BQ9NTI5 1447 aa12.48□□□□□ -0.41
KRTAP3-1-201ENST00000391588 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
KRTAP3-1-201ENST00000391588 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
KRTAP3-1-201ENST00000391588 PIAS4Q8N2W9 510 aaPredicted RBP12.41□□□□□ -0.42
KRTAP3-1-201ENST00000391588 WDR62O43379 1518 aa12.39□□□□□ -0.43
KRTAP3-1-201ENST00000391588 CADPSQ9ULU8 1353 aa12.38□□□□□ -0.43
KRTAP3-1-201ENST00000391588 CEP164Q9UPV0 1460 aa12.31□□□□□ -0.44
KRTAP3-1-201ENST00000391588 WIZO95785 1651 aa12.29□□□□□ -0.44
KRTAP3-1-201ENST00000391588 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.45
KRTAP3-1-201ENST00000391588 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
KRTAP3-1-201ENST00000391588 URB2Q14146 1524 aaKnown RBP12.19□□□□□ -0.46
KRTAP3-1-201ENST00000391588 CFTRP13569 1480 aa12.19□□□□□ -0.46
KRTAP3-1-201ENST00000391588 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
KRTAP3-1-201ENST00000391588 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
KRTAP3-1-201ENST00000391588 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
KRTAP3-1-201ENST00000391588 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
KRTAP3-1-201ENST00000391588 TOP2AP11388 1531 aaKnown RBP12.1□□□□□ -0.47
KRTAP3-1-201ENST00000391588 ZNF608Q9ULD9 1512 aaPredicted RBP12.09□□□□□ -0.47
KRTAP3-1-201ENST00000391588 PRDM2Q13029 1718 aa12.08□□□□□ -0.48
KRTAP3-1-201ENST00000391588 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
KRTAP3-1-201ENST00000391588 IFT140Q96RY7 1462 aa12.06□□□□□ -0.48
KRTAP3-1-201ENST00000391588 MSH5O43196 834 aa12.05□□□□□ -0.48
KRTAP3-1-201ENST00000391588 EIF4G3O43432 1585 aaKnown RBP12.02□□□□□ -0.49
KRTAP3-1-201ENST00000391588 CYB5RLQ6IPT4 315 aa12.02□□□□□ -0.49
KRTAP3-1-201ENST00000391588 TOPBP1Q92547 1522 aa12.01□□□□□ -0.49
KRTAP3-1-201ENST00000391588 TRHP20396 242 aaPredicted RBP12□□□□□ -0.49
KRTAP3-1-201ENST00000391588 CHD1O14646 1710 aa12□□□□□ -0.49
KRTAP3-1-201ENST00000391588 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
KRTAP3-1-201ENST00000391588 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
KRTAP3-1-201ENST00000391588 AQRO60306 1485 aaKnown RBP eCLIP11.94□□□□□ -0.5
KRTAP3-1-201ENST00000391588 DNMBPQ6XZF7 1577 aa11.93□□□□□ -0.5
KRTAP3-1-201ENST00000391588 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
KRTAP3-1-201ENST00000391588 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
KRTAP3-1-201ENST00000391588 FBLN2P98095 1184 aa11.92□□□□□ -0.5
KRTAP3-1-201ENST00000391588 POLA1P09884 1462 aaPredicted RBP11.87□□□□□ -0.51
KRTAP3-1-201ENST00000391588 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
KRTAP3-1-201ENST00000391588 TDRD9Q8NDG6 1382 aaKnown RBP11.82□□□□□ -0.52
KRTAP3-1-201ENST00000391588 CLASP1Q7Z460 1538 aa11.82□□□□□ -0.52
KRTAP3-1-201ENST00000391588 SNAPC4Q5SXM2 1469 aa11.82□□□□□ -0.52
KRTAP3-1-201ENST00000391588 PPP4R3CPQ6ZMV5 832 aa11.8□□□□□ -0.52
KRTAP3-1-201ENST00000391588 SYNJ1O43426 1573 aa11.79□□□□□ -0.52
KRTAP3-1-201ENST00000391588 SOGA1O94964 1423 aa11.78□□□□□ -0.52
KRTAP3-1-201ENST00000391588 WDR97A6NE52 1622 aa11.76□□□□□ -0.53
KRTAP3-1-201ENST00000391588 CHMP7Q8WUX9 453 aaPredicted RBP11.76□□□□□ -0.53
KRTAP3-1-201ENST00000391588 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
KRTAP3-1-201ENST00000391588 MAGI1Q96QZ7 1491 aaPredicted RBP11.76□□□□□ -0.53
KRTAP3-1-201ENST00000391588 SYNJ2O15056 1496 aa11.72□□□□□ -0.53
KRTAP3-1-201ENST00000391588 GRIN2BQ13224 1484 aa11.72□□□□□ -0.53
KRTAP3-1-201ENST00000391588 GAPVD1Q14C86 1478 aa11.71□□□□□ -0.53
KRTAP3-1-201ENST00000391588 CUX1P39880 1505 aa11.7□□□□□ -0.54
KRTAP3-1-201ENST00000391588 PBRM1Q86U86 1689 aa11.69□□□□□ -0.54
KRTAP3-1-201ENST00000391588 KCNA4P22459 653 aa11.66□□□□□ -0.54
KRTAP3-1-201ENST00000391588 ERCC6L2Q5T890 1561 aa11.64□□□□□ -0.55
KRTAP3-1-201ENST00000391588 ABCA5Q8WWZ7 1642 aa11.61□□□□□ -0.55
KRTAP3-1-201ENST00000391588 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
KRTAP3-1-201ENST00000391588 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
KRTAP3-1-201ENST00000391588 GRIN2AQ12879 1464 aa11.58□□□□□ -0.56
KRTAP3-1-201ENST00000391588 CEP170Q5SW79 1584 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms