RNA–Protein interactions for RNA: ENST00000390987.1

RNA5SP339-201, Transcript of RNA, 5S ribosomal pseudogene 339, humanhuman

BASIC

Gene RNA5SP339, Length 122 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP339-201ENST00000390987 NISCHQ9Y2I1 1504 aa13.47□□□□□ -0.25
RNA5SP339-201ENST00000390987 CCDC180Q9P1Z9 1646 aa12.1□□□□□ -0.47
RNA5SP339-201ENST00000390987 ABCC9O60706 1549 aa11.68□□□□□ -0.54
RNA5SP339-201ENST00000390987 RB1CC1Q8TDY2 1594 aa11.31□□□□□ -0.6
RNA5SP339-201ENST00000390987 NACADO15069 1562 aa11.3□□□□□ -0.6
RNA5SP339-201ENST00000390987 MYO15BQ96JP2 1530 aa11.27□□□□□ -0.61
RNA5SP339-201ENST00000390987 ZCCHC6Q5VYS8 1495 aaKnown RBP11.26□□□□□ -0.61
RNA5SP339-201ENST00000390987 DCAF1Q9Y4B6 1507 aa11.21□□□□□ -0.61
RNA5SP339-201ENST00000390987 UNC13AQ9UPW8 1703 aa11.12□□□□□ -0.63
RNA5SP339-201ENST00000390987 BICRAQ9NZM4 1560 aa11□□□□□ -0.65
RNA5SP339-201ENST00000390987 DCAF8L2P0C7V8 631 aa10.97□□□□□ -0.65
RNA5SP339-201ENST00000390987 SCRIBQ14160 1630 aa10.94□□□□□ -0.66
RNA5SP339-201ENST00000390987 SHROOM4Q9ULL8 1493 aa10.93□□□□□ -0.66
RNA5SP339-201ENST00000390987 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
RNA5SP339-201ENST00000390987 EIF4G1Q04637 1599 aaKnown RBP10.69□□□□□ -0.7
RNA5SP339-201ENST00000390987 DNAJC5BQ9UF47 199 aa10.66□□□□□ -0.7
RNA5SP339-201ENST00000390987 CC2D2AQ9P2K1 1620 aa10.63□□□□□ -0.71
RNA5SP339-201ENST00000390987 CECR2Q9BXF3 1484 aa10.52□□□□□ -0.73
RNA5SP339-201ENST00000390987 SMARCA4P51532 1647 aa10.5□□□□□ -0.73
RNA5SP339-201ENST00000390987 BAZ1AQ9NRL2 1556 aaPredicted RBP10.46□□□□□ -0.74
RNA5SP339-201ENST00000390987 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
RNA5SP339-201ENST00000390987 HMGXB3Q12766 1538 aa10.41□□□□□ -0.74
RNA5SP339-201ENST00000390987 SMARCA2P51531 1590 aa10.4□□□□□ -0.74
RNA5SP339-201ENST00000390987 NCAPD3P42695 1498 aa10.39□□□□□ -0.75
RNA5SP339-201ENST00000390987 ATAD2BQ9ULI0 1458 aa10.38□□□□□ -0.75
RNA5SP339-201ENST00000390987 MROH2BQ7Z745 1585 aa10.37□□□□□ -0.75
RNA5SP339-201ENST00000390987 BAZ1BQ9UIG0 1483 aaKnown RBP10.3□□□□□ -0.76
RNA5SP339-201ENST00000390987 WIZO95785 1651 aa10.27□□□□□ -0.77
RNA5SP339-201ENST00000390987 RSF1Q96T23 1441 aaPredicted RBP10.21□□□□□ -0.78
RNA5SP339-201ENST00000390987 TOP2AP11388 1531 aaKnown RBP10.19□□□□□ -0.78
RNA5SP339-201ENST00000390987 LAMC3Q9Y6N6 1575 aa10.16□□□□□ -0.78
RNA5SP339-201ENST00000390987 NESP48681 1621 aa10.12□□□□□ -0.79
RNA5SP339-201ENST00000390987 THOC2Q8NI27 1593 aaKnown RBP10.09□□□□□ -0.79
RNA5SP339-201ENST00000390987 KIF21AQ7Z4S6 1674 aa10.09□□□□□ -0.79
RNA5SP339-201ENST00000390987 PRDM2Q13029 1718 aa10.07□□□□□ -0.8
RNA5SP339-201ENST00000390987 ERCC6Q03468 1493 aa10.06□□□□□ -0.8
RNA5SP339-201ENST00000390987 CUX2O14529 1486 aa10.04□□□□□ -0.8
RNA5SP339-201ENST00000390987 CADPSQ9ULU8 1353 aa10.03□□□□□ -0.8
RNA5SP339-201ENST00000390987 CFTRP13569 1480 aa10.03□□□□□ -0.8
RNA5SP339-201ENST00000390987 PDS5BQ9NTI5 1447 aa10□□□□□ -0.81
RNA5SP339-201ENST00000390987 CCDC88BA6NC98 1476 aa9.99□□□□□ -0.81
RNA5SP339-201ENST00000390987 WDR62O43379 1518 aa9.98□□□□□ -0.81
RNA5SP339-201ENST00000390987 FANCD2Q9BXW9 1451 aa9.96□□□□□ -0.82
RNA5SP339-201ENST00000390987 MRC2Q9UBG0 1479 aa9.96□□□□□ -0.82
RNA5SP339-201ENST00000390987 CEP164Q9UPV0 1460 aa9.96□□□□□ -0.82
RNA5SP339-201ENST00000390987 URB2Q14146 1524 aaKnown RBP9.88□□□□□ -0.83
RNA5SP339-201ENST00000390987 DNMBPQ6XZF7 1577 aa9.84□□□□□ -0.83
RNA5SP339-201ENST00000390987 TOPBP1Q92547 1522 aa9.81□□□□□ -0.84
RNA5SP339-201ENST00000390987 ABCC8Q09428 1581 aa9.79□□□□□ -0.84
RNA5SP339-201ENST00000390987 TARBP1Q13395 1621 aaKnown RBP9.77□□□□□ -0.85
RNA5SP339-201ENST00000390987 SUPT5HO00267 1087 aaKnown RBP9.75□□□□□ -0.85
RNA5SP339-201ENST00000390987 EIF4G3O43432 1585 aaKnown RBP9.75□□□□□ -0.85
RNA5SP339-201ENST00000390987 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
RNA5SP339-201ENST00000390987 IFT140Q96RY7 1462 aa9.74□□□□□ -0.85
RNA5SP339-201ENST00000390987 CUX1P39880 1505 aa9.74□□□□□ -0.85
RNA5SP339-201ENST00000390987 POLA1P09884 1462 aaPredicted RBP9.73□□□□□ -0.85
RNA5SP339-201ENST00000390987 BIVM-ERCC5R4GMW8 1640 aa9.71□□□□□ -0.85
RNA5SP339-201ENST00000390987 ZNF608Q9ULD9 1512 aaPredicted RBP9.7□□□□□ -0.86
RNA5SP339-201ENST00000390987 FGD5Q6ZNL6 1462 aa9.69□□□□□ -0.86
RNA5SP339-201ENST00000390987 TOP2BQ02880 1626 aa9.68□□□□□ -0.86
RNA5SP339-201ENST00000390987 SYNJ1O43426 1573 aa9.67□□□□□ -0.86
RNA5SP339-201ENST00000390987 ABCA5Q8WWZ7 1642 aa9.65□□□□□ -0.86
RNA5SP339-201ENST00000390987 RAD54L2Q9Y4B4 1467 aa9.63□□□□□ -0.87
RNA5SP339-201ENST00000390987 PBRM1Q86U86 1689 aa9.63□□□□□ -0.87
RNA5SP339-201ENST00000390987 DNAJC5Q9H3Z4 198 aa9.62□□□□□ -0.87
RNA5SP339-201ENST00000390987 WRNQ14191 1432 aaPredicted RBP eCLIP9.62□□□□□ -0.87
RNA5SP339-201ENST00000390987 ABCA10Q8WWZ4 1543 aa9.61□□□□□ -0.87
RNA5SP339-201ENST00000390987 SOGA1O94964 1423 aa9.61□□□□□ -0.87
RNA5SP339-201ENST00000390987 CHD1O14646 1710 aa9.61□□□□□ -0.87
RNA5SP339-201ENST00000390987 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.87
RNA5SP339-201ENST00000390987 MAGI1Q96QZ7 1491 aaPredicted RBP9.57□□□□□ -0.88
RNA5SP339-201ENST00000390987 GRIN2BQ13224 1484 aa9.56□□□□□ -0.88
RNA5SP339-201ENST00000390987 SNAPC4Q5SXM2 1469 aa9.56□□□□□ -0.88
RNA5SP339-201ENST00000390987 ADAMTS12P58397 1594 aa9.55□□□□□ -0.88
RNA5SP339-201ENST00000390987 TDRD9Q8NDG6 1382 aaKnown RBP9.54□□□□□ -0.88
RNA5SP339-201ENST00000390987 GAPVD1Q14C86 1478 aa9.53□□□□□ -0.88
RNA5SP339-201ENST00000390987 SYNJ2O15056 1496 aa9.52□□□□□ -0.89
RNA5SP339-201ENST00000390987 ERICH3Q5RHP9 1530 aa9.51□□□□□ -0.89
RNA5SP339-201ENST00000390987 CLASP1Q7Z460 1538 aa9.51□□□□□ -0.89
RNA5SP339-201ENST00000390987 RIMBP3CA6NJZ7 1639 aa9.47□□□□□ -0.89
RNA5SP339-201ENST00000390987 RIMBP3BA6NNM3 1639 aa9.47□□□□□ -0.89
RNA5SP339-201ENST00000390987 RIMBP3Q9UFD9 1639 aa9.47□□□□□ -0.89
RNA5SP339-201ENST00000390987 CUL7Q14999 1698 aa9.46□□□□□ -0.89
RNA5SP339-201ENST00000390987 GRIN2AQ12879 1464 aa9.46□□□□□ -0.9
RNA5SP339-201ENST00000390987 ARHGEF11O15085 1522 aa9.46□□□□□ -0.9
RNA5SP339-201ENST00000390987 OSCARQ8IYS5 282 aa9.45□□□□□ -0.9
RNA5SP339-201ENST00000390987 CEP170Q5SW79 1584 aa9.45□□□□□ -0.9
RNA5SP339-201ENST00000390987 SHROOM2Q13796 1616 aa9.43□□□□□ -0.9
RNA5SP339-201ENST00000390987 RUSC2Q8N2Y8 1516 aa9.43□□□□□ -0.9
RNA5SP339-201ENST00000390987 FHAD1B1AJZ9 1412 aa9.43□□□□□ -0.9
RNA5SP339-201ENST00000390987 NUP160Q12769 1436 aa9.42□□□□□ -0.9
RNA5SP339-201ENST00000390987 KIF27Q86VH2 1401 aa9.4□□□□□ -0.9
RNA5SP339-201ENST00000390987 ARAP1Q96P48 1450 aa9.38□□□□□ -0.91
RNA5SP339-201ENST00000390987 FBLN2P98095 1184 aa9.35□□□□□ -0.91
RNA5SP339-201ENST00000390987 CHMP7Q8WUX9 453 aaPredicted RBP9.35□□□□□ -0.91
RNA5SP339-201ENST00000390987 IGF1RP08069 1367 aa9.34□□□□□ -0.91
RNA5SP339-201ENST00000390987 ERCC6L2Q5T890 1561 aa9.33□□□□□ -0.92
RNA5SP339-201ENST00000390987 CTTNBP2Q8WZ74 1663 aa9.29□□□□□ -0.92
RNA5SP339-201ENST00000390987 KIAA0586Q9BVV6 1533 aa9.29□□□□□ -0.92
RNA5SP339-201ENST00000390987 IQGAP2Q13576 1575 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms