RNA–Protein interactions for RNA: ENST00000390735.2

MIR550A3-201, Transcript of microRNA 550a-3, humanhuman

BASIC

Gene MIR550A3, Length 95 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR550A3-201ENST00000390735 NISCHQ9Y2I1 1504 aa13.34□□□□□ -0.27
MIR550A3-201ENST00000390735 ABCC9O60706 1549 aa12.61□□□□□ -0.39
MIR550A3-201ENST00000390735 DNAJC5BQ9UF47 199 aa12.26□□□□□ -0.45
MIR550A3-201ENST00000390735 CCDC180Q9P1Z9 1646 aa12.17□□□□□ -0.46
MIR550A3-201ENST00000390735 RB1CC1Q8TDY2 1594 aa11.81□□□□□ -0.52
MIR550A3-201ENST00000390735 PABPN1Q86U42 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
MIR550A3-201ENST00000390735 NACADO15069 1562 aa11.62□□□□□ -0.55
MIR550A3-201ENST00000390735 DNAJC5Q9H3Z4 198 aa11.61□□□□□ -0.55
MIR550A3-201ENST00000390735 UNC13AQ9UPW8 1703 aa11.55□□□□□ -0.56
MIR550A3-201ENST00000390735 BICRAQ9NZM4 1560 aa11.49□□□□□ -0.57
MIR550A3-201ENST00000390735 DCAF8L2P0C7V8 631 aa11.46□□□□□ -0.57
MIR550A3-201ENST00000390735 CECR2Q9BXF3 1484 aa11.41□□□□□ -0.58
MIR550A3-201ENST00000390735 CC2D2AQ9P2K1 1620 aa11.37□□□□□ -0.59
MIR550A3-201ENST00000390735 MYO15BQ96JP2 1530 aa11.31□□□□□ -0.6
MIR550A3-201ENST00000390735 SHROOM4Q9ULL8 1493 aa11.28□□□□□ -0.6
MIR550A3-201ENST00000390735 EIF4G1Q04637 1599 aaKnown RBP11.24□□□□□ -0.61
MIR550A3-201ENST00000390735 CUX2O14529 1486 aa11.06□□□□□ -0.64
MIR550A3-201ENST00000390735 SCRIBQ14160 1630 aa11.04□□□□□ -0.64
MIR550A3-201ENST00000390735 DCAF1Q9Y4B6 1507 aa10.99□□□□□ -0.65
MIR550A3-201ENST00000390735 ZCCHC6Q5VYS8 1495 aaKnown RBP10.93□□□□□ -0.66
MIR550A3-201ENST00000390735 ERCC6Q03468 1493 aa10.91□□□□□ -0.66
MIR550A3-201ENST00000390735 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
MIR550A3-201ENST00000390735 NCAPD3P42695 1498 aa10.74□□□□□ -0.69
MIR550A3-201ENST00000390735 NESP48681 1621 aa10.7□□□□□ -0.7
MIR550A3-201ENST00000390735 THOC2Q8NI27 1593 aaKnown RBP10.68□□□□□ -0.7
MIR550A3-201ENST00000390735 ATAD2BQ9ULI0 1458 aa10.62□□□□□ -0.71
MIR550A3-201ENST00000390735 HMGXB3Q12766 1538 aa10.59□□□□□ -0.71
MIR550A3-201ENST00000390735 SMARCA2P51531 1590 aa10.57□□□□□ -0.72
MIR550A3-201ENST00000390735 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
MIR550A3-201ENST00000390735 KIF21AQ7Z4S6 1674 aa10.54□□□□□ -0.72
MIR550A3-201ENST00000390735 PDS5BQ9NTI5 1447 aa10.52□□□□□ -0.73
MIR550A3-201ENST00000390735 OSCARQ8IYS5 282 aa10.5□□□□□ -0.73
MIR550A3-201ENST00000390735 BAZ1AQ9NRL2 1556 aaPredicted RBP10.5□□□□□ -0.73
MIR550A3-201ENST00000390735 SMARCA4P51532 1647 aa10.49□□□□□ -0.73
MIR550A3-201ENST00000390735 BAZ1BQ9UIG0 1483 aaKnown RBP10.49□□□□□ -0.73
MIR550A3-201ENST00000390735 MRC2Q9UBG0 1479 aa10.44□□□□□ -0.74
MIR550A3-201ENST00000390735 WDR62O43379 1518 aa10.43□□□□□ -0.74
MIR550A3-201ENST00000390735 PEG3Q9GZU2 1588 aa10.4□□□□□ -0.74
MIR550A3-201ENST00000390735 RIMBP3CA6NJZ7 1639 aa10.4□□□□□ -0.75
MIR550A3-201ENST00000390735 RIMBP3BA6NNM3 1639 aa10.4□□□□□ -0.75
MIR550A3-201ENST00000390735 RIMBP3Q9UFD9 1639 aa10.4□□□□□ -0.75
MIR550A3-201ENST00000390735 CADPSQ9ULU8 1353 aa10.39□□□□□ -0.75
MIR550A3-201ENST00000390735 AEBP2Q6ZN18 517 aaPredicted RBP10.35□□□□□ -0.75
MIR550A3-201ENST00000390735 CEP164Q9UPV0 1460 aa10.31□□□□□ -0.76
MIR550A3-201ENST00000390735 TRHP20396 242 aaPredicted RBP10.31□□□□□ -0.76
MIR550A3-201ENST00000390735 ARHGEF11O15085 1522 aa10.31□□□□□ -0.76
MIR550A3-201ENST00000390735 CYB5RLQ6IPT4 315 aa10.28□□□□□ -0.76
MIR550A3-201ENST00000390735 MROH2BQ7Z745 1585 aa10.26□□□□□ -0.77
MIR550A3-201ENST00000390735 FANCD2Q9BXW9 1451 aa10.26□□□□□ -0.77
MIR550A3-201ENST00000390735 URB2Q14146 1524 aaKnown RBP10.2□□□□□ -0.78
MIR550A3-201ENST00000390735 ARAP1Q96P48 1450 aa10.17□□□□□ -0.78
MIR550A3-201ENST00000390735 CFTRP13569 1480 aa10.17□□□□□ -0.78
MIR550A3-201ENST00000390735 ZNF608Q9ULD9 1512 aaPredicted RBP10.15□□□□□ -0.78
MIR550A3-201ENST00000390735 WIZO95785 1651 aa10.12□□□□□ -0.79
MIR550A3-201ENST00000390735 IFT140Q96RY7 1462 aa10.12□□□□□ -0.79
MIR550A3-201ENST00000390735 RSF1Q96T23 1441 aaPredicted RBP10.1□□□□□ -0.79
MIR550A3-201ENST00000390735 CHD1O14646 1710 aa10.09□□□□□ -0.79
MIR550A3-201ENST00000390735 EIF4G3O43432 1585 aaKnown RBP10.07□□□□□ -0.8
MIR550A3-201ENST00000390735 FBLN2P98095 1184 aa10.04□□□□□ -0.8
MIR550A3-201ENST00000390735 PRDM2Q13029 1718 aa10.02□□□□□ -0.8
MIR550A3-201ENST00000390735 AQRO60306 1485 aaKnown RBP eCLIP10.01□□□□□ -0.81
MIR550A3-201ENST00000390735 TOPBP1Q92547 1522 aa10.01□□□□□ -0.81
MIR550A3-201ENST00000390735 ABCC8Q09428 1581 aa9.98□□□□□ -0.81
MIR550A3-201ENST00000390735 ILDR1Q86SU0 546 aaPredicted RBP9.98□□□□□ -0.81
MIR550A3-201ENST00000390735 TARBP1Q13395 1621 aaKnown RBP9.96□□□□□ -0.81
MIR550A3-201ENST00000390735 TOP2AP11388 1531 aaKnown RBP9.96□□□□□ -0.82
MIR550A3-201ENST00000390735 CLASP1Q7Z460 1538 aa9.96□□□□□ -0.82
MIR550A3-201ENST00000390735 DNMBPQ6XZF7 1577 aa9.93□□□□□ -0.82
MIR550A3-201ENST00000390735 SYNJ1O43426 1573 aa9.91□□□□□ -0.82
MIR550A3-201ENST00000390735 CHMP7Q8WUX9 453 aaPredicted RBP9.89□□□□□ -0.83
MIR550A3-201ENST00000390735 GAPVD1Q14C86 1478 aa9.89□□□□□ -0.83
MIR550A3-201ENST00000390735 POLA1P09884 1462 aaPredicted RBP9.88□□□□□ -0.83
MIR550A3-201ENST00000390735 SNAPC4Q5SXM2 1469 aa9.88□□□□□ -0.83
MIR550A3-201ENST00000390735 TDRD9Q8NDG6 1382 aaKnown RBP9.88□□□□□ -0.83
MIR550A3-201ENST00000390735 CCDC88BA6NC98 1476 aa9.86□□□□□ -0.83
MIR550A3-201ENST00000390735 MAGI1Q96QZ7 1491 aaPredicted RBP9.85□□□□□ -0.83
MIR550A3-201ENST00000390735 RAD54L2Q9Y4B4 1467 aa9.85□□□□□ -0.83
MIR550A3-201ENST00000390735 SOGA1O94964 1423 aa9.84□□□□□ -0.83
MIR550A3-201ENST00000390735 WDR97A6NE52 1622 aa9.83□□□□□ -0.84
MIR550A3-201ENST00000390735 SYNJ2O15056 1496 aa9.82□□□□□ -0.84
MIR550A3-201ENST00000390735 KDM4FA0A1W2PPD8 638 aa9.81□□□□□ -0.84
MIR550A3-201ENST00000390735 KIF13AQ9H1H9 1805 aa9.81□□□□□ -0.84
MIR550A3-201ENST00000390735 GRIN2BQ13224 1484 aa9.8□□□□□ -0.84
MIR550A3-201ENST00000390735 ERCC6L2Q5T890 1561 aa9.77□□□□□ -0.85
MIR550A3-201ENST00000390735 FGD5Q6ZNL6 1462 aa9.75□□□□□ -0.85
MIR550A3-201ENST00000390735 PBRM1Q86U86 1689 aa9.72□□□□□ -0.85
MIR550A3-201ENST00000390735 CEP170Q5SW79 1584 aa9.71□□□□□ -0.86
MIR550A3-201ENST00000390735 FAM69CQ0P6D2 419 aa9.7□□□□□ -0.86
MIR550A3-201ENST00000390735 ABCC10Q5T3U5 1492 aa9.69□□□□□ -0.86
MIR550A3-201ENST00000390735 KDM6BO15054 1643 aa9.68□□□□□ -0.86
MIR550A3-201ENST00000390735 SHROOM2Q13796 1616 aa9.67□□□□□ -0.86
MIR550A3-201ENST00000390735 CUX1P39880 1505 aa9.67□□□□□ -0.86
MIR550A3-201ENST00000390735 GRIN2AQ12879 1464 aa9.67□□□□□ -0.86
MIR550A3-201ENST00000390735 NUP160Q12769 1436 aa9.65□□□□□ -0.86
MIR550A3-201ENST00000390735 ABCA5Q8WWZ7 1642 aa9.64□□□□□ -0.87
MIR550A3-201ENST00000390735 DIP2BQ9P265 1576 aa9.64□□□□□ -0.87
MIR550A3-201ENST00000390735 NPM1P06748 294 aaKnown RBP eCLIP9.64□□□□□ -0.87
MIR550A3-201ENST00000390735 MAPKBP1O60336 1514 aa9.63□□□□□ -0.87
MIR550A3-201ENST00000390735 HECW2Q9P2P5 1572 aa9.62□□□□□ -0.87
MIR550A3-201ENST00000390735 ABCA10Q8WWZ4 1543 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms