RNA–Protein interactions for RNA: ENST00000390443.3

TRAV8-6-201, Transcript of T cell receptor alpha variable 8-6, humanhuman

APPRIS P1 BASIC

Gene TRAV8-6, Length 561 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6-201ENST00000390443 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
TRAV8-6-201ENST00000390443 ABCC9O60706 1549 aa21.14■□□□□ 0.98
TRAV8-6-201ENST00000390443 CCDC180Q9P1Z9 1646 aa20.79■□□□□ 0.92
TRAV8-6-201ENST00000390443 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
TRAV8-6-201ENST00000390443 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
TRAV8-6-201ENST00000390443 DCAF8L2P0C7V8 631 aa19.84■□□□□ 0.77
TRAV8-6-201ENST00000390443 NACADO15069 1562 aa19.78■□□□□ 0.76
TRAV8-6-201ENST00000390443 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
TRAV8-6-201ENST00000390443 MYO15BQ96JP2 1530 aa19.43■□□□□ 0.7
TRAV8-6-201ENST00000390443 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
TRAV8-6-201ENST00000390443 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
TRAV8-6-201ENST00000390443 ZCCHC6Q5VYS8 1495 aaKnown RBP19.18■□□□□ 0.66
TRAV8-6-201ENST00000390443 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
TRAV8-6-201ENST00000390443 SHROOM4Q9ULL8 1493 aa19.09■□□□□ 0.65
TRAV8-6-201ENST00000390443 CECR2Q9BXF3 1484 aa19.06■□□□□ 0.64
TRAV8-6-201ENST00000390443 SCRIBQ14160 1630 aa19.03■□□□□ 0.64
TRAV8-6-201ENST00000390443 CC2D2AQ9P2K1 1620 aa19.02■□□□□ 0.64
TRAV8-6-201ENST00000390443 EIF4G1Q04637 1599 aaKnown RBP18.94■□□□□ 0.62
TRAV8-6-201ENST00000390443 AEBP2Q6ZN18 517 aaPredicted RBP18.57■□□□□ 0.56
TRAV8-6-201ENST00000390443 DNAJC5Q9H3Z4 198 aa18.52■□□□□ 0.56
TRAV8-6-201ENST00000390443 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
TRAV8-6-201ENST00000390443 ERCC6Q03468 1493 aa18.28■□□□□ 0.52
TRAV8-6-201ENST00000390443 CUX2O14529 1486 aa18.26■□□□□ 0.51
TRAV8-6-201ENST00000390443 ATAD2BQ9ULI0 1458 aa18.24■□□□□ 0.51
TRAV8-6-201ENST00000390443 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
TRAV8-6-201ENST00000390443 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
TRAV8-6-201ENST00000390443 HMGXB3Q12766 1538 aa18.1■□□□□ 0.49
TRAV8-6-201ENST00000390443 NESP48681 1621 aa18.09■□□□□ 0.49
TRAV8-6-201ENST00000390443 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
TRAV8-6-201ENST00000390443 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
TRAV8-6-201ENST00000390443 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
TRAV8-6-201ENST00000390443 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
TRAV8-6-201ENST00000390443 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
TRAV8-6-201ENST00000390443 PDS5BQ9NTI5 1447 aa17.86■□□□□ 0.45
TRAV8-6-201ENST00000390443 THOC2Q8NI27 1593 aaKnown RBP17.86■□□□□ 0.45
TRAV8-6-201ENST00000390443 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
TRAV8-6-201ENST00000390443 CADPSQ9ULU8 1353 aa17.78■□□□□ 0.44
TRAV8-6-201ENST00000390443 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
TRAV8-6-201ENST00000390443 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
TRAV8-6-201ENST00000390443 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
TRAV8-6-201ENST00000390443 WIZO95785 1651 aa17.62■□□□□ 0.41
TRAV8-6-201ENST00000390443 WDR62O43379 1518 aa17.62■□□□□ 0.41
TRAV8-6-201ENST00000390443 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
TRAV8-6-201ENST00000390443 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
TRAV8-6-201ENST00000390443 CFTRP13569 1480 aa17.5■□□□□ 0.39
TRAV8-6-201ENST00000390443 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
TRAV8-6-201ENST00000390443 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
TRAV8-6-201ENST00000390443 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
TRAV8-6-201ENST00000390443 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
TRAV8-6-201ENST00000390443 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
TRAV8-6-201ENST00000390443 ZNF608Q9ULD9 1512 aaPredicted RBP17.25■□□□□ 0.35
TRAV8-6-201ENST00000390443 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
TRAV8-6-201ENST00000390443 TOPBP1Q92547 1522 aa17.18■□□□□ 0.34
TRAV8-6-201ENST00000390443 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
TRAV8-6-201ENST00000390443 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
TRAV8-6-201ENST00000390443 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
TRAV8-6-201ENST00000390443 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
TRAV8-6-201ENST00000390443 ARHGEF11O15085 1522 aa17.12■□□□□ 0.33
TRAV8-6-201ENST00000390443 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
TRAV8-6-201ENST00000390443 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
TRAV8-6-201ENST00000390443 FBLN2P98095 1184 aa17.09■□□□□ 0.33
TRAV8-6-201ENST00000390443 AQRO60306 1485 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRAV8-6-201ENST00000390443 EIF4G3O43432 1585 aaKnown RBP17.07■□□□□ 0.32
TRAV8-6-201ENST00000390443 DNMBPQ6XZF7 1577 aa17.07■□□□□ 0.32
TRAV8-6-201ENST00000390443 POLA1P09884 1462 aaPredicted RBP17■□□□□ 0.31
TRAV8-6-201ENST00000390443 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
TRAV8-6-201ENST00000390443 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
TRAV8-6-201ENST00000390443 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
TRAV8-6-201ENST00000390443 RAD54L2Q9Y4B4 1467 aa16.98■□□□□ 0.31
TRAV8-6-201ENST00000390443 SOGA1O94964 1423 aa16.96■□□□□ 0.31
TRAV8-6-201ENST00000390443 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
TRAV8-6-201ENST00000390443 CHD1O14646 1710 aa16.93■□□□□ 0.3
TRAV8-6-201ENST00000390443 CHMP7Q8WUX9 453 aaPredicted RBP16.9■□□□□ 0.3
TRAV8-6-201ENST00000390443 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
TRAV8-6-201ENST00000390443 FGD5Q6ZNL6 1462 aa16.87■□□□□ 0.29
TRAV8-6-201ENST00000390443 CUX1P39880 1505 aa16.82■□□□□ 0.28
TRAV8-6-201ENST00000390443 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
TRAV8-6-201ENST00000390443 MAGI1Q96QZ7 1491 aaPredicted RBP16.8■□□□□ 0.28
TRAV8-6-201ENST00000390443 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
TRAV8-6-201ENST00000390443 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
TRAV8-6-201ENST00000390443 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
TRAV8-6-201ENST00000390443 SYNJ2O15056 1496 aa16.77■□□□□ 0.28
TRAV8-6-201ENST00000390443 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
TRAV8-6-201ENST00000390443 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
TRAV8-6-201ENST00000390443 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
TRAV8-6-201ENST00000390443 PBRM1Q86U86 1689 aa16.61■□□□□ 0.25
TRAV8-6-201ENST00000390443 ABCA5Q8WWZ7 1642 aa16.6■□□□□ 0.25
TRAV8-6-201ENST00000390443 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
TRAV8-6-201ENST00000390443 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
TRAV8-6-201ENST00000390443 ERCC6L2Q5T890 1561 aa16.54■□□□□ 0.24
TRAV8-6-201ENST00000390443 NUP160Q12769 1436 aa16.53■□□□□ 0.24
TRAV8-6-201ENST00000390443 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.23
TRAV8-6-201ENST00000390443 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
TRAV8-6-201ENST00000390443 CEP170Q5SW79 1584 aa16.5■□□□□ 0.23
TRAV8-6-201ENST00000390443 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
TRAV8-6-201ENST00000390443 JPH4Q96JJ6 628 aa16.43■□□□□ 0.22
TRAV8-6-201ENST00000390443 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
TRAV8-6-201ENST00000390443 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
TRAV8-6-201ENST00000390443 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
TRAV8-6-201ENST00000390443 SHROOM2Q13796 1616 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms