RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 NISCHQ9Y2I1 1504 aa24.38■■□□□ 1.49
TRAV13-2-201ENST00000390439 ABCC9O60706 1549 aa22.19■■□□□ 1.14
TRAV13-2-201ENST00000390439 CCDC180Q9P1Z9 1646 aa21.91■■□□□ 1.1
TRAV13-2-201ENST00000390439 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
TRAV13-2-201ENST00000390439 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
TRAV13-2-201ENST00000390439 NACADO15069 1562 aa20.85■□□□□ 0.93
TRAV13-2-201ENST00000390439 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
TRAV13-2-201ENST00000390439 PABPN1Q86U42 306 aaKnown RBP eCLIP20.69■□□□□ 0.9
TRAV13-2-201ENST00000390439 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
TRAV13-2-201ENST00000390439 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
TRAV13-2-201ENST00000390439 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
TRAV13-2-201ENST00000390439 SHROOM4Q9ULL8 1493 aa20.15■□□□□ 0.82
TRAV13-2-201ENST00000390439 DCAF1Q9Y4B6 1507 aa20.13■□□□□ 0.81
TRAV13-2-201ENST00000390439 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
TRAV13-2-201ENST00000390439 CECR2Q9BXF3 1484 aa20.04■□□□□ 0.8
TRAV13-2-201ENST00000390439 CC2D2AQ9P2K1 1620 aa19.99■□□□□ 0.79
TRAV13-2-201ENST00000390439 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
TRAV13-2-201ENST00000390439 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
TRAV13-2-201ENST00000390439 DNAJC5Q9H3Z4 198 aa19.54■□□□□ 0.72
TRAV13-2-201ENST00000390439 NCAPD3P42695 1498 aa19.27■□□□□ 0.67
TRAV13-2-201ENST00000390439 CUX2O14529 1486 aa19.25■□□□□ 0.67
TRAV13-2-201ENST00000390439 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
TRAV13-2-201ENST00000390439 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
TRAV13-2-201ENST00000390439 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
TRAV13-2-201ENST00000390439 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
TRAV13-2-201ENST00000390439 SMARCA4P51532 1647 aa19.03■□□□□ 0.64
TRAV13-2-201ENST00000390439 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
TRAV13-2-201ENST00000390439 NESP48681 1621 aa18.96■□□□□ 0.63
TRAV13-2-201ENST00000390439 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
TRAV13-2-201ENST00000390439 PEG3Q9GZU2 1588 aa18.84■□□□□ 0.61
TRAV13-2-201ENST00000390439 LAMC3Q9Y6N6 1575 aa18.83■□□□□ 0.6
TRAV13-2-201ENST00000390439 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.6
TRAV13-2-201ENST00000390439 THOC2Q8NI27 1593 aaKnown RBP18.76■□□□□ 0.59
TRAV13-2-201ENST00000390439 MROH2BQ7Z745 1585 aa18.75■□□□□ 0.59
TRAV13-2-201ENST00000390439 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
TRAV13-2-201ENST00000390439 KIF21AQ7Z4S6 1674 aa18.65■□□□□ 0.58
TRAV13-2-201ENST00000390439 TRIM41Q8WV44 630 aa18.61■□□□□ 0.57
TRAV13-2-201ENST00000390439 MRC2Q9UBG0 1479 aa18.6■□□□□ 0.57
TRAV13-2-201ENST00000390439 WDR62O43379 1518 aa18.51■□□□□ 0.55
TRAV13-2-201ENST00000390439 CEP164Q9UPV0 1460 aa18.49■□□□□ 0.55
TRAV13-2-201ENST00000390439 WIZO95785 1651 aa18.48■□□□□ 0.55
TRAV13-2-201ENST00000390439 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.54
TRAV13-2-201ENST00000390439 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
TRAV13-2-201ENST00000390439 CFTRP13569 1480 aa18.39■□□□□ 0.54
TRAV13-2-201ENST00000390439 RSF1Q96T23 1441 aaPredicted RBP18.33■□□□□ 0.53
TRAV13-2-201ENST00000390439 TOP2AP11388 1531 aaKnown RBP18.28■□□□□ 0.52
TRAV13-2-201ENST00000390439 URB2Q14146 1524 aaKnown RBP18.26■□□□□ 0.51
TRAV13-2-201ENST00000390439 AEBP2Q6ZN18 517 aaPredicted RBP18.2■□□□□ 0.5
TRAV13-2-201ENST00000390439 IFT140Q96RY7 1462 aa18.15■□□□□ 0.5
TRAV13-2-201ENST00000390439 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
TRAV13-2-201ENST00000390439 ABCC8Q09428 1581 aa18.08■□□□□ 0.48
TRAV13-2-201ENST00000390439 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
TRAV13-2-201ENST00000390439 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
TRAV13-2-201ENST00000390439 TOPBP1Q92547 1522 aa18.05■□□□□ 0.48
TRAV13-2-201ENST00000390439 RIMBP3CA6NJZ7 1639 aa18.04■□□□□ 0.48
TRAV13-2-201ENST00000390439 RIMBP3BA6NNM3 1639 aa18.04■□□□□ 0.48
TRAV13-2-201ENST00000390439 RIMBP3Q9UFD9 1639 aa18.04■□□□□ 0.48
TRAV13-2-201ENST00000390439 ARHGEF11O15085 1522 aa18■□□□□ 0.47
TRAV13-2-201ENST00000390439 CYB5RLQ6IPT4 315 aa18■□□□□ 0.47
TRAV13-2-201ENST00000390439 FBLN2P98095 1184 aa17.97■□□□□ 0.47
TRAV13-2-201ENST00000390439 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.46
TRAV13-2-201ENST00000390439 AQRO60306 1485 aaKnown RBP eCLIP17.94■□□□□ 0.46
TRAV13-2-201ENST00000390439 EIF4G3O43432 1585 aaKnown RBP17.92■□□□□ 0.46
TRAV13-2-201ENST00000390439 TRHP20396 242 aaPredicted RBP17.91■□□□□ 0.46
TRAV13-2-201ENST00000390439 POLA1P09884 1462 aaPredicted RBP17.85■□□□□ 0.45
TRAV13-2-201ENST00000390439 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
TRAV13-2-201ENST00000390439 SOGA1O94964 1423 aa17.84■□□□□ 0.45
TRAV13-2-201ENST00000390439 TDRD9Q8NDG6 1382 aaKnown RBP17.81■□□□□ 0.44
TRAV13-2-201ENST00000390439 CHMP7Q8WUX9 453 aaPredicted RBP17.81■□□□□ 0.44
TRAV13-2-201ENST00000390439 CHD1O14646 1710 aa17.81■□□□□ 0.44
TRAV13-2-201ENST00000390439 ARAP1Q96P48 1450 aa17.8■□□□□ 0.44
TRAV13-2-201ENST00000390439 RAD54L2Q9Y4B4 1467 aa17.8■□□□□ 0.44
TRAV13-2-201ENST00000390439 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
TRAV13-2-201ENST00000390439 WDR97A6NE52 1622 aa17.72■□□□□ 0.43
TRAV13-2-201ENST00000390439 FGD5Q6ZNL6 1462 aa17.71■□□□□ 0.43
TRAV13-2-201ENST00000390439 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
TRAV13-2-201ENST00000390439 GRIN2BQ13224 1484 aa17.69■□□□□ 0.42
TRAV13-2-201ENST00000390439 SYNJ1O43426 1573 aa17.67■□□□□ 0.42
TRAV13-2-201ENST00000390439 SYNJ2O15056 1496 aa17.64■□□□□ 0.41
TRAV13-2-201ENST00000390439 CLASP1Q7Z460 1538 aa17.64■□□□□ 0.41
TRAV13-2-201ENST00000390439 CUX1P39880 1505 aa17.63■□□□□ 0.41
TRAV13-2-201ENST00000390439 GAPVD1Q14C86 1478 aa17.59■□□□□ 0.41
TRAV13-2-201ENST00000390439 ABCA10Q8WWZ4 1543 aa17.52■□□□□ 0.39
TRAV13-2-201ENST00000390439 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
TRAV13-2-201ENST00000390439 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
TRAV13-2-201ENST00000390439 PBRM1Q86U86 1689 aa17.47■□□□□ 0.39
TRAV13-2-201ENST00000390439 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
TRAV13-2-201ENST00000390439 GRIN2AQ12879 1464 aa17.42■□□□□ 0.38
TRAV13-2-201ENST00000390439 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
TRAV13-2-201ENST00000390439 NUP160Q12769 1436 aa17.38■□□□□ 0.37
TRAV13-2-201ENST00000390439 ADAMTS12P58397 1594 aa17.33■□□□□ 0.37
TRAV13-2-201ENST00000390439 CEP170Q5SW79 1584 aa17.33■□□□□ 0.37
TRAV13-2-201ENST00000390439 ERCC6L2Q5T890 1561 aa17.32■□□□□ 0.36
TRAV13-2-201ENST00000390439 TOP2BQ02880 1626 aa17.3■□□□□ 0.36
TRAV13-2-201ENST00000390439 JPH4Q96JJ6 628 aa17.3■□□□□ 0.36
TRAV13-2-201ENST00000390439 ERICH3Q5RHP9 1530 aa17.29■□□□□ 0.36
TRAV13-2-201ENST00000390439 NPM1P06748 294 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRAV13-2-201ENST00000390439 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.35
TRAV13-2-201ENST00000390439 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
TRAV13-2-201ENST00000390439 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms